Gasterosteus aculeatus (three-spined stickleback): 120809023
Help
Entry
120809023 CDS
T07457
Symbol
shank3a
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 3 isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
SAM_1
Ank
Ank_4
SAM_2
Ank_3
SH3_2
Ank_5
PDZ_6
SH3_9
PDZ
FERM_f0
SAM_PNT
SH3_1
Motif
Other DBs
NCBI-GeneID:
120809023
NCBI-ProteinID:
XP_040018441
LinkDB
All DBs
Position
XIX:complement(8493234..8591213)
Genome browser
AA seq
1969 aa
AA seq
DB search
MPLRPAAGKHEPPSSPRQDQQQHHHQHHTHTHSLALPYTHTSNGSQGASTDSGSSQEEDG
GVPFAVGVPAFCPGAERSHRARAPMEEPTGNTVVIRIGIPDLQQTKCMKFNVDAPIWQSK
QRILCTLNQSLKDVLNYGLFQPAYNGKAGKFLDEERQLREYPFPSLAPVPYLEFRYKRRV
YTQTHLDEKQLFKLHTKANLKKFMEYMQQRNIEKVSRFLEKGLDPNFHDPDTGECPLTLA
AQLEGCADLIKVLKSGGAHLDFRTKDGITALHKAVRSKNHTALITLLDLGASPDYKDSRG
LTPLYHSSMVGGDPYCCELLLHDHAQVGCVDENGWQEIHQACRYGHVQHLEHLLFYGADM
SAQNASGNTALHVCALYNQDSCARVILFRGANKEIKNYNSQTAFQVAIIAGNFDLAEIIK
VHKTSDVVPFRETPSYTSHRRVAPGTLPSPRSLLRSASDNNLNGDHDHNRGQAPRETRGR
QGHSPVPSLRSLPAFGQQHSSLGESRHGEIPDSSLQSTGSSRSSHSRSPSLHHMHEEDRP
VPRRSHSHGYPHGHGHRGRLSPGSVQRDPSPPHHTPPALTGPRGPKRKLYSAVPGRTFIV
VKPYTPQGEGEIQLNRGERVKDYDSNDVEVLSIGEGGFWEGTVKGRTGWFPADYVEEVQM
RQYDPRLETREDRTKRLFRHYTVGSYDNFTSYSDYIIEEKNAVLQKKENEGFGFVLRGAK
AETPIEEFTPTPAFPALQYLESVDVEGVAWRAGLRTGDFLIEVNGVNVIKVGHKQVVSLI
RQGGNRLLMKVVSVTRKPESEEVVRKKAPPPPKRAPSTTLTLRSKSMTAELEELASARRR
RGERLDEMLASQESILRSQPSEADYRAATVKQRPTSRRITPAEISSLFERQGMTLHGGLH
PGIERGHIPLPKGMSRTKSFGATEEDRLSALEGEQRFPRSSSMTDSLREPSQPHPIPPPP
QTAPPPPPYYLDTGPPPAFCPPPPPSRTQSQGYEPGERSSFKPSSLDLPYEDAHRQATHL
ERQKKARSMIILQDSSHLPVEPTEIPRPSAAPPPERIKRKGRIIDNPYANVGQFSIGLYA
PTKPQRKKSPLVKQLQVEDAQEKASLALAAAHSRESSPSGRHQYTHGHTHTSRADYYQQQ
LMAERERIRAQGEMMFQGKGPFAAAIAGAVKDRERRLEERRKSTVFLSVGTMEGASGTSC
DLPSLTQSHSVDERMLNRELGQLPPPALALSPSPSGTTFIHPLTGKPLDPNSPLALALAA
RERALTSQSQSPTGSPETRTKHERDPQTKESPHGEGASTTPPFSPKSAMAAGYGVGSSAA
SILVPQPTKSQWAPSPSPLSFRKEMEARVEERKGEKRLEDKKSMLISILDTSQQKTAGLI
MVHATSNGQAAGVGPEPERTPSPKPTEPSKSSSPTVCRPQAQLQAQPQTPASPAQEKSLA
QGSSEEDVDPYTVTLPPAILSSSDEETREELRKIGVVPPPDEFSNGLLAQAQGMPVSPTK
PAASPATPTTATPKTPSATTTPTVTPAQPQPPQPAPPPGAGVVSGKPSDPLEPAAVGESG
SAADSGVEEVDTRSSSDRERDHHLETTSTVSTVSSMSTLSSESGEPADTHTTHTSYADGQ
TFVLDKPPVPPKPRLKSHIGGGKGPVTFRDPLLKQSSDSELLSQQQSAALAAAAAGGAGL
PAGGSASVTGLAPTKPRYLFQRRSKLWGDPVEPRGVGLGIGSLGNLGGLGLGLGLDEVAK
PTVMGELSSRLQQLNKDTRSLGEEPLGASFDPGRKSPVAGARLFSSLGELHTISQRSYGT
TFTIRPGSRHPVTRRTPSPGSGSPDRCDPFGRFSGFGLPNSPTTPPQTILKSSSLSLPQE
PKEVRFVMRSSSTRSRSRSPSPSHSPGLGSPLLALRPFHQKPLHLWNKYDVGDWLESINL
GEHRAGFQEHEIEGSHLPALTKEDFAELGVTRVGHRMNIERALKMLLES
NT seq
5910 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgcgtccggcagccggcaaacatgagccacccagctctccgcggcaggaccag
cagcagcatcatcatcagcatcacacacatacacactcactcgcactgccttacacacac
acatcaaacggcagccagggggccagcactgacagcggcagctcccaggaagaggacggc
ggcgttccctttgctgtcggcgttccggctttctgtcccggtgcagagcggagccacaga
gcaagggcacccatggaagagccgaccggcaacaccgtggtcatccgcattggaatccca
gaccttcaacagacgaaatgtatgaaatttaatgtggatgctccgatctggcagtccaag
cagcgaatcctgtgcacgctcaaccagagcctgaaggatgtgctcaactacggcctgttc
cagccggcctacaacggcaaggctggcaagtttcttgacgaggagagacagctaagggaa
taccctttcccatccctcgctcctgtaccttacctggagttccgctataaaagacgtgtg
tacacccagactcacctggatgaaaagcagctgttcaagctccataccaaggcaaacttg
aagaagtttatggagtacatgcagcaaaggaacattgaaaaggtctcaaggttcctggaa
aagggcctggaccccaacttccatgatccagatacaggagaatgtcctctcacgctcgca
gcacagctggagggatgtgcagatctcatcaaggtgctgaagagtggaggggcgcatctg
gacttcagaacaaaagatggcataacagccctgcacaaggccgtgcgcagcaagaaccat
acagcacttataacgctgttggacttgggtgcatcgcctgactataaagacagtaggggg
ttgactcctctgtaccacagctcgatggtaggaggagacccctactgctgtgagctgctg
ctgcatgatcatgcacaagttggctgtgtggatgagaatggctggcaggagatacatcag
gcgtgccgctacggccacgtgcaacacctggaacacctgctgttctacggagctgacatg
agcgcccagaatgcatctggaaacactgcactgcatgtgtgtgctctctacaaccaggac
agctgtgcacgagtcatcctgttccggggggccaataaggagataaagaactacaacagc
cagaccgcctttcaggtggccattatagccggaaactttgatctggctgaaatcataaag
gtccacaaaacatcggatgttgtgcctttcagagagaccccctcctacaccagccaccga
cgcgtggcgcccggcaccctgccctcgccgcgctccttgctgcgctctgcgagtgacaac
aacctgaacggggaccacgatcacaaccgcggtcaggcccctagagaaacccgtggccgt
cagggtcactccccggttccatccctgcgcagcctgccggctttcgggcagcagcacagc
agcctcggagagagccgtcatggagagatccctgacagcagtctccagagtacgggcagc
tccaggtcctcccactcccgctcgccctcgctacatcacatgcacgaagaggaccggcca
gttcccagaaggtcccacagccacggctaccctcacggacacggccatcgcggaagactc
agccccggctcagtgcagagagacccgagcccccctcaccacacgcctccggcgctgacg
ggcccccgcgggcccaaacggaaactctacagcgccgtccccgggcgtaccttcattgtg
gtcaagccctacactccacagggggagggagagatccaactgaaccgcggcgagagggtc
aaagactatgacagtaatgacgtagaagttctgagtataggggaaggtggcttctgggaa
ggcacggtcaaagggaggacaggctggtttccagcagactatgtggaagaagttcagatg
aggcagtatgacccccggctagagacccgggaggaccgcacaaagagactgttcagacac
tacactgtgggatcctatgacaacttcacctcatacagtgactacatcatagaggaaaag
aatgctgttttgcagaagaaagaaaatgaggggtttggttttgtcctgcggggagccaaa
gccgagacgcccatcgaggagttcacccccaccccagcgttcccggccctccagtacctg
gagtctgtggacgttgagggagtggcctggcgggctggtcttaggacaggagacttcctc
attgaggtaaacggggttaatgtaataaaggtgggccataagcaggtggtgtccttgatc
cgccaggggggcaacaggctgctgatgaaggtggtgtctgtgacgcgcaaacctgaatcc
gaggaagttgttcgcaagaaagctcccccaccacccaaaagagctcccagcaccaccctg
acgctgcgctctaagtcaatgaccgccgagctggaggaactggcttctgctcggaggaga
agaggagagagactagatgagatgttggcatcccaggaatctatcttgcgttctcagccc
tcagaggcagattacagagcagcgactgtcaaacaaagacccaccagcaggagaataaca
ccagcagagatcagttcactgtttgagagacaagggatgactctacatggaggtcttcac
ccaggcattgagaggggtcatataccactaccaaaggggatgtccaggaccaagtctttt
ggtgccactgaggaggatcggttgtctgcccttgaaggcgagcagagatttccccgcagc
tcctccatgacagacagcctccgagagccctcacagccccatcccatccctccaccgcca
cagacagcacctccccctcctccctactacctagacactggtcctcccccagccttctgc
cccccccctcccccatctaggactcagagtcagggttatgagcccggagaacgctccagt
ttcaagccctcctccttggacctgccttacgaggacgctcaccggcaggcgacacacctg
gaaagacagaagaaagcccgctccatgatcatcctgcaggactcttcgcatctacctgta
gaacctacggaaattccgcgtccttctgctgctcctccacccgagcgaatcaaaaggaag
ggccgaattattgacaacccttatgctaatgtgggacaatttagcattggactatacgca
cccactaagccccagaggaagaaaagtcccctagttaaacaactacaggtggaagacgca
caagaaaaagctagtttggccttggctgctgcccactccagagagagctccccgtcaggg
cgacaccagtatacccatggacacacacacaccagccgtgcggactactaccagcagcag
ctgatggctgagcgagagcgcatccgcgcccagggagagatgatgtttcagggcaaaggc
ccctttgccgctgcaatagctggagcagtaaaagaccgcgagcgtcgcctcgaagaacgg
aggaaatccaccgtcttcctttccgttgggaccatggagggggcgtctggcaccagctgt
gacctcccttctctgactcagtctcactctgttgatgagcggatgctcaacagagagctg
ggacagctgcctccccccgccttggccctgagcccctcacccagtgggaccacctttatt
catccgctcacagggaagcccctggatcccaactctccactggctcttgcgctggccgca
agggaaagagcgctgacctcccagagccagtcgccaactggcagtccagagaccaggact
aagcatgagcgggaccctcagaccaaagagtcgccacatggggaaggggcctccacaact
cccccattttcgcctaaaagcgccatggcagcggggtatggagtgggatcctccgcggca
tctattttagttccccagccaacaaaatcccagtgggccccatctccatcgcctttatcg
ttcaggaaagagatggaggccagagtagaggagaggaagggggaaaaaaggctggaggat
aaaaaaagcatgttgattagtattttggatacgtcgcagcagaaaaccgcagggctcatc
atggtccacgcgactagtaacggccaggctgctggggtgggtccagagccagagcggaca
ccttccccaaagcccacggagccgagcaaatcttccagtcctacggtctgccggccccag
gcccaactccaggcccagcctcaaactcctgccagtccggcccaagagaaaagcctggct
caggggagctccgaggaggatgtggatccgtacacagtgaccctgccgccggcaattttg
tcctccagtgatgaggaaactagagaggagctgcgtaagataggagttgttccgccgcca
gatgagttctctaacggtctgctggcgcaggcgcaagggatgccagtgtccccgacgaag
cctgccgcctctcccgccacccctacaacagcgacacccaaaactccctcagccacgaca
acgccaactgtgacacccgcccagcctcagcctccccaaccggcacctccacccggtgca
ggagttgtctcagggaagccctctgaccctctggagccagcggcagtgggggagtccggc
tctgcggccgactctggcgtggaggaggtcgacacgcgtagctccagcgacagagagcga
gaccaccacctcgagaccaccagcaccgtctccacggtctccagcatgtccacgctgtcc
tcggaaagcggcgagccggccgacacgcacaccacgcacacctcctacgccgacgggcag
acttttgtgctcgacaagccgccagtgcctcctaagcctcgactcaagtcccatatagga
ggcggcaaaggccccgtcaccttcagggaccctctgctgaagcagagctcggacagcgag
cttctatcacaacaacagtccgccgctctggctgccgccgcggctggaggagccgggctg
cccgcaggcggctcagcctcagtgactggactagccccgaccaaaccgcgctatctcttc
cagcggcgctctaagctgtggggggacccggtggagcctcgtggagtggggctaggtatt
gggagtttgggcaaccttggtggactggggctggggctgggtttagatgaggtagcaaaa
ccaacggttatgggggagctcagttcacgactacagcagttaaataaagacactaggtca
ctgggagaggagccactaggagcgtcatttgatccagggaggaaatcacctgtggcaggt
gccagacttttcagcagcttaggcgagctccacaccatctctcagaggagttacggcacc
acattcaccatccgccctggcagccgtcaccccgtcacccgacgaaccccgagcccgggg
tcaggctcccctgatcgctgcgacccctttggacgattctcgggcttcggcctaccgaac
tccccgaccacaccgccacaaaccatcctcaagtcgtcgagcctcagcctgccgcaggag
cctaaggaggtgcgcttcgtgatgaggagctccagcacgcgttcccgttcccgctccccg
tcaccctcccattcccccggactgggctcgccacttttagccctcaggcccttccatcag
aagccactccacctctggaataagtacgacgtcggagactggctggagagcataaatctg
ggggagcacagggcgggctttcaggaacatgagatcgaaggctctcacctcccggcttta
accaaggaggactttgcagagctcggagtcacgcgagtcggacatcgcatgaacattgag
cgagcgctgaaaatgctgctggagagctga
DBGET
integrated database retrieval system