Gasterosteus aculeatus (three-spined stickleback): 120809041
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Entry
120809041 CDS
T07457
Symbol
zgc:173742
Name
(RefSeq) DNA topoisomerase I, mitochondrial isoform X1
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gat03032
]
120809041 (zgc:173742)
Enzymes [BR:
gat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
120809041 (zgc:173742)
DNA replication proteins [BR:
gat03032
]
Eukaryotic type
DNA Topoisomerases
120809041 (zgc:173742)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Motif
Other DBs
NCBI-GeneID:
120809041
NCBI-ProteinID:
XP_040018506
UniProt:
A0AAQ4R734
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Position
XIX:5415938..5437413
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AA seq
716 aa
AA seq
DB search
MARKNEAKENGKARLKAKTPKKRRDYENDGATGYATWNSAKSTEATQIPGRRTPQKKVKT
PKTEPLDSAIRESVKPKQEGEERKGIKRKRVKEKLTDDPSHSTASHSSKKESAEKEEKEV
GKRRIRRTKRAVTAARLLKIQKQEEEQQQSCWRWWEEKKYEDGVKWKFLEHNGPYFPPDY
QPLPDNVHFFYDGMEVKLSPAAEEVAVFFGRMLDHEYTFEEVFQANFLTDWRKEMVDEER
LLITDLDKCDFREIHTMHKATVEAKKNSTVAEKLALKEANQKILEEYGYCLLDHHKERIG
NFKIEPPGLFRGRGGHPKKGMLKKRIQPEDVTINCSSESRVPVPPAGHSWKQVRHDNTVT
WLASWTENIQGVTKYIMLNANSKLKGEKDWEKYEMARKLKLCVDDIRNQYLQDLKSEDMV
TRQRAVALYFIDKLALRAENEKEEGETADTVGCCSLRVEHVTLHKKLEGNKYVVELDFLG
KDSIRYYNKVSVIKKVFKNLNMFLEDRNPGDELFGRLNTIMLNKHLSSLMTGLTARVFRT
YNASITLQEQLKELTNKSDNEQEKLLCYNKANRAVAILCNHQRALPKTFEQSMANLQAKI
DDQKKYLALLKTELKQAKKKAKTKGSSDPKLQTQVVDKKAAVRRCKEKLLKLDVQAINRE
ENKQIALGTSKVSYLDPRITVAWCKNMAVRIEKIYNKAQRDKFAWAINMTEDDFEF
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggcaagaaagaatgaggctaaagaaaacgggaaggccagactcaaagcgaagacgccg
aagaagcgcagagactatgaaaacgatggagccacgggatatgcgacctggaacagtgcc
aagtccactgaagcgacacagataccgggaagacgaacgcctcagaaaaaggtcaagaca
cccaagactgaacccctggactctgccatccgtgagtcggtgaaaccgaaacaagagggt
gaggaaagaaaaggaataaaaaggaaaagagtaaaagaaaagctcacagacgacccttca
cactccactgcttcacattcgtcaaagaaggaaagtgcagaaaaagaagaaaaggaggtt
gggaaaaggagaataaggaggacaaaacgtgctgtgacggcggcaagactgctgaagatc
caaaagcaggaggaggagcagcagcagagttgctggagatggtgggaggagaagaagtat
gaagatggggtgaaatggaagtttctggaacacaacggaccctatttccctcccgactac
cagcctctgccagacaacgttcacttcttttatgatggtatggaggtgaagctgagcccg
gccgctgaagaggtggcggttttctttggccggatgttggaccatgagtacaccttcgag
gaggtgttccaggctaacttcttgaccgattggaggaaggaaatggtcgatgaggagaga
ttgctgattacagatctggacaaatgtgacttccgggagatccataccatgcacaaagcc
acggtggaggccaagaaaaactccaccgtagcggagaaactggccttgaaagaggccaac
cagaagattttggaggaatatggctactgtctgctggaccaccacaaagagcgcattggc
aacttcaagattgagcctccggggctgttccgcggtcgaggcgggcatcccaagaaggga
atgctgaagaaaaggatccaaccagaggacgtcaccatcaactgcagcagcgaatcccga
gttcccgtgccgcctgctggtcacagctggaagcaggttcgccatgacaacactgtgaca
tggctggcgagctggaccgagaacatccagggcgtcactaaatacatcatgctgaatgcc
aactctaaactcaagggagagaaggactgggagaaatacgagatggcccggaagctgaag
ttgtgtgttgacgacatccgtaaccagtaccttcaggatctcaaatccgaagatatggtc
acacgtcaaagagccgtggccctctacttcatagacaagctggcactgagagctgaaaat
gagaaggaggagggagagacggcagacacagtcggttgctgctcgctacgtgtggagcac
gtcacccttcacaagaagctggaaggcaacaagtatgtggtggagttagacttcctgggt
aaagatagcatccgctactacaacaaggtctccgtcatcaagaaggtttttaagaatctt
aatatgttcctggaggacagaaatcctggggatgaactctttggcagactcaacactatc
atgctgaacaagcacctgagctctctaatgaccggtctgaccgccagggtcttcaggacg
tacaacgcttccatcaccttacaggagcagctcaaagagctgacaaacaagtctgacaat
gagcaggagaagctgctgtgctacaacaaggcaaacagagcagttgccattctgtgtaac
caccagcgggcgctgccaaagaccttcgagcagtctatggccaacctccaggccaagatt
gatgatcagaagaaatatctggccctcttaaagacagagctcaaacaggccaagaagaag
gcaaagaccaaaggcagctcggaccccaagctgcagactcaggtggtggacaagaaggca
gcggtgcggcgctgcaaggagaagctgctgaagttggatgtccaggcgataaacagagag
gaaaacaaacagattgcacttggtacctcaaaggtcagctacctggacccgcgcatcacc
gtggcctggtgcaagaacatggcggtacgaatagaaaaaatctacaataaggcccaaagg
gacaaatttgcctgggccatcaacatgacggaggacgactttgagttctaa
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