Gasterosteus aculeatus (three-spined stickleback): 120809095
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Entry
120809095 CDS
T07457
Name
(RefSeq) DNA-binding protein RFX7
KO
K09175
DNA-binding protein RFX7
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gat03000
]
120809095
Transcription factors [BR:
gat03000
]
Eukaryotic type
Other basic domains
RF-X
120809095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX5_N
RFX_DNA_binding
Pox_D5
Cdc6_C
Motif
Other DBs
NCBI-GeneID:
120809095
NCBI-ProteinID:
XP_040018623
LinkDB
All DBs
Position
XIX:16933964..16947260
Genome browser
AA seq
1483 aa
AA seq
DB search
MADDQQQPGPKPASGLGSLPALVPGLQGPEANALQFKIKNSICKSVQSKVDGILQDVEKF
TDIEKLYLYLKLPSGPSNGNDKRTENERGSSTPGLCDQSSMSSSRTQQMYAFNWIRNHLE
EHPETSLPKQEVYDEYKSYCDNLGYNPLSAADFGKIMKNVFPNMKARRLGMRGKSKYCYS
GLRKKAFVHMPSLPNLDLQKSGDGCELMEPTGQSPSAEDEMRSAACGLVCEWAQKVLSRQ
FDHVEDLARFLLNSHYIGTKSMAALTVMTGTPTGMKTPTPASAFVPTAEANSFQPQVKTL
PSPSVDAKQQLQRKIQKKQQEQKLHSPLPSEAQVKRTEASTPGPTIPCGSPALLSSQPTI
GIVVAAVPSPVTVQRGRQLMTSPSPVGTSEGKVLPVNFQVVTQSVKQSPKHPQNISASPV
SDRLARHGTRYAQILPKPSATSAITLRSPSALLITNSPIKTVMPTPHVSSVNVVKMTAIA
LAPSSSGGTSVRPASAGVNTVAALDDSQHPHGGTSFAPQSPAIRTGPLVSTHILSSDLKV
VSEAGNDNTFAAGAKEGGMAKFRAASEPSFLIKCSPGPDRGSRVKSDPTPPPASVAVAGT
LDSNSINCHGSTLYLTVDNQNSIGNTSSNGSSALTPTSKDPCLDGKSPRKRTGPSGEAHV
IPVKRVFISQQPLAFIDNPKPAVSAALKRIPRPGTPARPESAPCKATVKHTSAGPSQILA
LSDSPITHSEGAQPVVKPQALLMKREDHSLAADTRAAGNNAPDQALLRQITRDSLTIPAN
SGAHEASVMRDLKSTIWEEGQLDELRKQAFAQQIPAEPKQAPSDQLSNIAQPPEASGQLS
LAQEMVDFAGSQPNMDYFPFNDDDMTQDSIVEELVQMEEQMKLKGLFGSCVDVSIQGQSA
SSQGSILNSHQAGSTFFHSAHSSTTPVQTPTPTPTPTPTPTPEMTLGHSMARESPCSRMA
PITPVDGAMGRHTPISTPLSNCSSSVPPSPVECRNPFAFTPINSSITGYHDASIVSSSPV
KPMQRPMATHPDKAKLEWINNRYNSNSAGPLPNHSIGILPSYQDLVDDQFRKPHAFAIPG
QSFQAQSRQDPAHFGRLTPISPVQQQQLVTSVNTPTKQESFAVPAPLDSKASTSSASSTF
RCRSVSPAVRQRNPSDNAHPLTTTNTNIITTTIRAVISPFNTPITSEVLSIPSNSQTVSS
VHSMVQRSQSVPLNIMMQSEMLPVQGQSNTVKITNVLLSKMEADGDDSVRGLGINNLSSN
YTARLNLTQILETTPGYAGGTAHQTQLPVCSSPAAFELQQHGYLTTGGGEQGSFSAGEGQ
AQAGPGDQDHHHHHQQQQQQQQLRENPAQTQPQLLLQSTQQPEAEDEQQQLDFNNTVKDL
LGDDGLNPSSQLVGQVASELNAVASDFSNDIRLTSDLSSSITDLNTLDTNLLFDPNQQQE
QYEDSTLEELKNDPLFQQICSDTVNSFDWLESKDQPTTVEMLG
NT seq
4452 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgatcaacaacaaccgggtccgaagcctgcctcggggttaggctctctccca
gccctggttccggggctccaggggcccgaggccaacgcgctgcagttcaaaataaagaac
tcgatctgcaaatctgtacaatcaaaagtggacggcatattgcaagatgttgagaagttt
acagacatcgaaaaactctacctctacctgaagttgccttctggtcccagcaatggcaat
gataaaaggactgagaatgagagggggtcctccactcctggattatgtgatcagagttcc
atgtcgtcaagccgcacgcaacagatgtatgcattcaactggatacgcaatcacctagaa
gagcacccggagacttccctcccaaagcaagaggtgtatgatgaatacaagagctattgt
gacaatctcggctacaatcccctgagtgcagccgacttcggaaagatcatgaagaatgtt
tttcctaacatgaaggcacgtcgactgggcatgaggggcaaatccaaatactgttatagc
gggttaaggaagaaggcttttgttcacatgccatccttacccaacctggatctgcagaag
tctggtgatgggtgcgagctgatggagccgacgggccagtccccgagtgctgaggacgaa
atgcgatctgccgcctgcggactggtgtgcgagtgggcccaaaaggtcctgagccgccag
tttgaccacgtggaggacctggcccgcttcctgctcaatagccactacattggtactaag
tccatggctgcgctcactgttatgaccggaacacctacaggaatgaagacgccaacccca
gcgtctgcgtttgtgccaacagctgaggcaaactctttccagccccaggtgaagaccctg
ccttctccctctgttgacgccaagcagcagctgcagcgcaagatccagaagaagcagcag
gagcagaagctccactcgcccctgcccagcgaggcccaggtcaagagaacggaggccagc
actcccggccccacgatcccctgtggcagccccgctctgctctcctctcagcccaccata
ggcatcgtagtagcagctgtgcccagcccagtcacggtgcagcgaggccggcagttgatg
acctcgcccagcccggtggggacctccgaagggaaagtgttgcccgtgaacttccaggtg
gtcactcagtccgtgaaacagtcccccaaacatcctcagaacatctccgccagtcccgtg
agtgaccggctggcgcgacacggtacgcgctacgcacaaattctgcccaagccctccgcc
accagtgccatcacgctgcgctcgccctccgccctgctcatcaccaacagccccataaaa
actgtgatgccgaccccccacgtcagctcggttaacgtggtgaagatgacggccatcgct
ctggctcccagcagcagcggcggcacgagcgtgcgtcccgcctcggcgggtgtgaacacc
gtagctgctctggacgactctcagcacccgcacggcgggacctcgtttgcccctcagtct
cctgcaatccgaaccggccccctggtctccacccacatcctgtcctccgacctcaaagtg
gtgtctgaagccggaaatgacaatacctttgctgccggggccaaagagggaggaatggcc
aagttccgggcggccagcgagccgagcttcctgattaagtgttctcccggacccgacaga
gggtcaagggtaaaaagcgaccctacgccccctcccgcctcggtagctgtagctggaact
ctagacagcaatagcattaactgccatggcagcactttgtacttgactgttgataatcag
aactccattggcaacacatcctccaatggctcctctgctcttaccccgacatcgaaagat
ccctgcctagacggcaagagcccaagaaagcgcacaggccccagtggggaggcccacgtc
attcctgtgaagagggtgttcatttcccagcagccactggcttttatcgataatcccaaa
cctgcagtcagtgctgctctgaagaggatccccagaccgggaaccccagccaggcccgag
agtgctccctgcaaagcgactgtgaaacacacctccgcagggccctcgcagatccttgcc
ctctctgactcgcctatcacacacagcgagggcgcccagcctgttgtcaaaccccaggcc
ctgctgatgaaacgcgaggatcattctctcgccgctgatacaagagcagctggaaacaac
gcgccggatcaggcgttgctaaggcagatcaccagggactctctcaccataccagccaac
tcaggagcacacgaagcctctgtgatgagggacttgaagagcacaatatgggaggaggga
cagctcgacgagcttcggaagcaggcgtttgcgcagcagataccagcagaacccaaacaa
gccccttctgaccaactttccaatatagctcagccccccgaggcctcaggccagctgagc
ctcgcgcaggagatggttgactttgccggttctcagcccaacatggactacttccctttc
aacgacgacgacatgacccaggacagcatcgtggaggagctggtgcaaatggaggagcag
atgaagctgaagggtctgttcgggagctgtgtggatgtgtccatccaaggccagtcagcc
agcagtcaaggctctatcctaaattctcaccaggccggctctactttcttccactctgcc
cacagcagcaccactcctgtccaaactccgactcccacgccgactccgactccgacaccc
acccccgagatgacgcttggtcacagcatggcgcgagagagcccctgttcccgcatggct
cccatcacccctgttgacggagccatgggtcgccacacccccatcagcacgccgctgtcc
aactgcagcagcagcgttcccccgagcccggtggagtgcaggaaccccttcgcgttcacg
ccgatcaactcgagcatcacagggtatcatgatgccagcattgtctccagcagccccgtt
aagcccatgcaaaggccgatggcgacgcaccctgacaaggccaagctggagtggatcaac
aaccgctacaacagcaactctgcaggtcctttgccaaaccatagcattggcattctgccc
agctaccaagacctggtagatgaccagtttcgtaagccacatgcctttgcgatcccaggc
cagtcatttcaagctcagtcgaggcaggatcctgctcactttggccggttgacccccata
tccccagtgcagcagcaacagctggtaacgagtgttaacacacccacaaaacaggagagt
tttgctgtgcctgcaccgttagacagcaaggcatcaacctcttctgcgtccagcactttc
cgttgccgcagtgtgagtcctgcagtgcgccagaggaaccccagtgacaacgcccaccct
ctaaccaccaccaataccaacatcatcaccaccaccatccgagccgtgatttcccccttt
aacacccccatcacctccgaggtgctcagcatcccgtccaacagtcagacggtcagctcc
gtgcacagcatggttcagcgtagccaatctgtgcccctgaacatcatgatgcagagtgag
atgctgcccgtgcagggtcagagcaacaccgtcaaaatcaccaacgtccttctgagcaag
atggaagctgatggcgatgattctgtccgcggcctgggcataaacaacctctcctccaac
tacacggcccgtttgaacctcacacagatcctggagaccacgcctggctacgccggagga
accgctcaccagactcagctgccggtctgctccagccccgctgcctttgagctccagcag
catggctacctgaccacaggcggtggagaacagggcagtttctccgctggggagggccaa
gcacaagcaggtcctggtgaccaagaccaccaccatcatcatcagcagcagcagcagcag
cagcagctccgtgagaatcccgcgcaaacacaaccgcagctcctcctccagagcacacag
cagccagaggcagaggacgagcagcaacagctggatttcaacaacactgtcaaggacctg
ctgggggacgatggcctcaatcccagttcccagttggtgggtcaggtagcttcagagctc
aacgctgtggcatctgacttttccaacgacatcagactgacctcagatctgtccagtagc
atcactgaccttaacacgttggacaccaacctgctgtttgatcccaatcaacagcaggaa
caatacgaagactccacactggaagagctgaagaacgacccgctgtttcagcaaatatgc
agtgatactgtgaactcctttgactggctagaaagcaaagaccagcctactacagtagag
atgctgggctaa
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