Gasterosteus aculeatus (three-spined stickleback): 120809125
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Entry
120809125 CDS
T07457
Symbol
irf7
Name
(RefSeq) interferon regulatory factor 7
KO
K09447
interferon regulatory factor 7
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04620
Toll-like receptor signaling pathway
gat04621
NOD-like receptor signaling pathway
gat04622
RIG-I-like receptor signaling pathway
gat04623
Cytosolic DNA-sensing pathway
gat05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
120809125 (irf7)
04621 NOD-like receptor signaling pathway
120809125 (irf7)
04622 RIG-I-like receptor signaling pathway
120809125 (irf7)
04623 Cytosolic DNA-sensing pathway
120809125 (irf7)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120809125 (irf7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gat03000
]
120809125 (irf7)
Transcription factors [BR:
gat03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
120809125 (irf7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
120809125
NCBI-ProteinID:
XP_040018668
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Position
XIX:10552053..10557516
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AA seq
428 aa
AA seq
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MQSPPKPPFARWLIEQVETGQYTGLRYEGQNRFRVPWKHNSRKDCSDEDCKIFRAWAVAS
GKIHEFPNNKARWKTNFRCAMNNIDKRFKMIMDNSKNLDDPHKIFEIIDAEYNYESPPTQ
DSPGDSYMRPDICSFPIEDFPIEDELILLDNLMALDLGNQTSENMAEDFSRYPVAAEHHL
QPVPDQPSYCEVNPPPVLSSPPQQPSIFDLEVSIHYRKREMLKVTLSTALLQLHYQHESP
ELDGHRIRFPSTDGLLDQRQVEFTNRILNNIQRGLFLEVQDTGIYAWRQDRCHVFASTSD
PSVAHPEPSKLLQNTRVELLSFEKYVNELKQFRDNNGGSPEYTINMCFGEKFPDGKPLEK
KLIVVKVVPLICRHYHEIAQMEGASSLHSANVSLQISHNSLYDLISSVFGLPTEEESARP
AAPLLPQS
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagccctcccaagcctccgttcgcccgctggctcatagagcaggtggagacgggc
cagtacacgggcctccgctacgaaggccaaaacaggttcagagtcccctggaagcacaac
tccagaaaggactgcagcgatgaagactgtaaaatattccgagcatgggcggtagcaagt
ggaaaaatccacgagttccccaacaacaaggccaggtggaaaaccaacttccgatgcgcc
atgaacaacatcgataagcgcttcaagatgataatggataattccaagaatttggacgac
cctcataagatcttcgagattatcgacgctgagtacaactatgaaagtccaccgactcaa
gactccccgggggattcttacatgcgtcccgatatatgcagcttccccatagaagatttc
cccattgaagacgagcttattctacttgacaatttaatggccttggatctcggaaaccag
acatcagagaatatggcagaggactttagccgctaccccgtagcagctgagcaccacctg
cagcctgtaccagaccagccttcttactgtgaggtaaatcctccaccagtcctaagttca
cctccgcagcagcctagtatatttgacctggaggtctccatccactacaggaaacgggaa
atgctaaaggtcacattgagcactgcccttctccagctacactaccagcacgagagccct
gagctcgacggccatcgcatccgcttcccctccacagacggtctgctggaccaaagacag
gttgagttcaccaaccgcatcctcaacaacatccagaggggtctcttcctggaggtgcag
gacactggcatctatgcctggagacaggacaggtgccacgtgtttgccagcaccagtgac
ccctcagtggctcacccagagcccagcaagctgctccagaacaccagggtggagctcctc
agctttgagaagtatgtaaatgaactgaagcagtttagagacaacaacggcggctctcca
gagtacaccatcaacatgtgcttcggagagaagttccccgatggaaaacctttggagaag
aagctcatcgtagtcaaagtggtccctctgatctgtcgacactaccatgagatcgcccag
atggaaggagcctcgtctcttcacagcgccaacgtcagcctacagatttcacacaacagc
ctttacgatctcattagctcggtctttggactgccgacagaggaagagtccgcacggccc
gcagcacctttactacctcagtcctga
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