Gasterosteus aculeatus (three-spined stickleback): 120809268
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Entry
120809268 CDS
T07457
Symbol
polr2c
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3 isoform X1
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03020
RNA polymerase
gat03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
120809268 (polr2c)
09124 Replication and repair
03420 Nucleotide excision repair
120809268 (polr2c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gat03021
]
120809268 (polr2c)
03400 DNA repair and recombination proteins [BR:
gat03400
]
120809268 (polr2c)
Transcription machinery [BR:
gat03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
120809268 (polr2c)
DNA repair and recombination proteins [BR:
gat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
120809268 (polr2c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
120809268
NCBI-ProteinID:
XP_040018883
UniProt:
G3NC28
LinkDB
All DBs
Position
XIX:complement(841550..843928)
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AA seq
275 aa
AA seq
DB search
MPYANQPTVKITELTDENVKFVIENTDLAVANSIRRVFMSEVATIAIDWIQIDANSSVLH
DEFIAHRVGLIPLTSDDIVDKMQYSRDCTCDDFCPECSVELTLDVRCTEDQTRHVTSRDL
LSNNPRVIPVTSRSRDSDPNDYVEQDDIILVKLRKGQELRLRAYAKKGFGKEHAKWNPTA
GVSFEYDPDNALRHTVFPRPEEWPKSEYSEIEEDEVQAPYDPNGKPERFYYNVESCGSLR
PETIVMSALAVLKKKLSDLQTQLSHEIQSDVLTIN
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccgtatgcgaaccagccgacggtgaaaataacggaattgaccgacgagaatgtcaaa
ttcgtcattgagaacaccgacctggcggtcgcgaactccatccgccgcgtgttcatgtca
gaagtcgccaccatagcgatcgactggatccagatcgacgccaactcttcggtgctgcac
gacgagttcatcgcgcaccgagtcggcctcatacctctcacgagtgacgacatcgtggac
aaaatgcagtattccagggactgcacctgtgacgatttctgcccggagtgctctgtggag
ttgacgctggacgtccggtgtaccgaggaccagacgcgccacgtcacctcgcgcgacctt
ctgtccaacaacccgagagtgatcccggtgacgtccaggagtcgggacagtgaccccaac
gactacgtcgaacaagacgacatcatactggtgaagcttcgtaagggccaggagctgcgg
ctcagggcgtacgccaagaagggcttcggcaaggagcacgccaagtggaaccccacggcg
ggggtgtccttcgagtacgacccggacaacgcgctgaggcacacggtcttcccgcggccc
gaggagtggccaaagagcgaatattccgagatcgaggaggatgaggtccaggctccctac
gaccccaacgggaagccggaaaggttctattacaacgtggagtcgtgcggctcgctgcga
ccggagaccatcgtcatgtcggcgctggccgtcctcaagaagaagctgagcgacctgcag
acgcagctgagccacgagatccagagcgacgtgctcaccatcaactga
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