Gasterosteus aculeatus (three-spined stickleback): 120809269
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Entry
120809269 CDS
T07457
Symbol
dennd4a
Name
(RefSeq) C-myc promoter-binding protein isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120809269 (dennd4a)
Membrane trafficking [BR:
gat04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
120809269 (dennd4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
DUF2464
PPR_long
Papo_T_antigen
Motif
Other DBs
NCBI-GeneID:
120809269
NCBI-ProteinID:
XP_040018885
LinkDB
All DBs
Position
XIX:17926606..17947225
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AA seq
1704 aa
AA seq
DB search
MMEDKGPRVADYFVVAGLTDLSKPLEEELHFDDAGPKSVQPKAPITDVAVVIRSLGEEVP
PGFTCVESTPSGLSAELNGASLRGPQIFLCFKRGRDKPPLTDLGVLYEWKEKLKPGCHIV
QTTPSGRPANVSSSSSQRIYITYRRAPKSQPHTSLAVTDVCVVIPGKGETPPHTFCKVDK
NLNSSMWGSSVYVCYKKSLAKANTIAYKAGLLCRYPEEDYESFPLPESVPMFCLPMGATV
ECWPEHTKHSLPVFSTFVLTGASGEKVYGAAIQFYEPYSEEKLSERQCSQLGLPSADGTR
SIYSNKSICLLSHWPFFQSFRSFLTFLYRYSISGPHALPIEKHISHFMQNVPFPSTQRPR
ILVQLSPHDSLILSQPVSSPLPLSGGSLSTLLLNLGPKNAATLLVLAVTEHKILVHSLRP
AVLTSVTEALVSMIFPFHWPCPYIPLCPLALAGVLSAPCPFIVGVDSRYFDLYVPPADIS
CVDLDTNTISQKDDKKALTWKILPRRACKHLLSTLNKLYQQLTEGGQMNREDVQMEHTVT
EMELDGGKSLHTLELEIQEAFLSFMAAILRGYRSYLLPITQAPSEKTTDASSLFDIQGFV
KSRDRSHQRFYSLMTKTQMFSRFIEECSFVSDKDASLAFFDECVDKLFTTGGKMDSERLE
ETRLIELDESHRSEHTVYVNPPELPPLPRGEEHPLCYSYSEFPVLNAELLQSLEGPKPPS
AGMAPRHSSPASPTAIFRRSKQEIKSAQKMAKTYSSMPQMWSKCLLRHCYGLWFICLPGF
VATCHSKVRALRTAYDVLRKMQDNKLQAPDEVCYRVLLQLCGQYSQPVLAVRVLFEMKKA
GVQPNAITYGYYNKAVLESTWPSTTRGGYFLWGKLRNVVLGVLKFKHAGRKQPTPHRDHQ
LSDGSDLDTVSHGSLDSANDSAERTSIDTDFTKMDSSDDGFSTGGQSDQGYDSLSKEEER
MCSRESNYSSAVEDKRQRPSTVEVPISSISPPGNFQSTVVSAGNRQASSPSSDVILRGPR
LKSERPKSLDLSGGHESLRLTVPSFSSTKQHQATADRLHGVEEEETQTGKQTPLMGRSIS
CGGGTVRRTGIDRGLDPLSLMATGVLQEGDQEISGPPTARRDLAEEIEMYMHNGSSPLSS
RTSSTNLQNPSSPLFRPASSPRDSPRPTTTPHSNAQLPLPAKPKDKLRPSPSLPLGLCTK
DRERPSSLVSPSSPTPSSSSFSMDSLFSPSLDIFKSSVISAGKGVAEKASRFYSRLSSQT
SFTQETNCDWISVSSLTSGEADCSSLLDNDPCLDPDGFVSPHHGSVSRLRRSPVVGHTNL
GSPSNPDRVFRHNSFSGGLALPSKIPRTPDSSPDASRFQPTPNYSMEVLMSSSSLCKTCD
CLVYDEEIMAGWTGNDSNLNSSCPFCGTAFLPFLNVEIKDLRLQSRSRLSPLGSSRKSHL
VTEEITSPSLSPGGKMSATDRTAPSPEDAGPAEVTVPYLSPLVLWKEMESLLVNEGDEAI
SSPTVVDQHPIVFWNLVWYFRRLELPSNLPALILASQHCSHGDQTPQSVSSEDSKQVLVR
IMWDNLKLHKDKDQPCYVLWNTHCATSLVRSGLCEEGQLFTVELLQGFVRSIKKSDVYQP
MSQIIQLLGPELGFKRQRSLYRDLLFLALVALGKNNININAFDREYKLAYDRLNHGQVKL
THNCDRPPGAGVMECRRTFGEPSL
NT seq
5115 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggataaagggccccgtgtagccgattacttcgtggttgccggcctcaccgac
ttgtccaagcctctggaggaggagcttcactttgacgatgccggccccaagtctgtgcaa
ccgaaagcccccataaccgacgtagctgtggtgatccgttccctgggtgaagaggtgccc
ccaggtttcacctgtgtcgaaagcaccccctccggcctctctgcggagctcaatggagcc
agcctcagggggccgcagatattcctgtgcttcaaacgaggcagagataagcctccactg
acagatcttggggttctgtacgagtggaaagagaaactgaaacccggatgtcacatcgtc
cagacgacgccctcaggtcgccccgccaacgtcagcagctcgtcgtcccaacgcatctac
atcacctaccgccgcgcccccaagagccagcctcacacctcactggctgtcactgatgtc
tgcgtcgtcatccccggcaagggggaaacgccccctcacaccttctgcaaggtcgacaag
aacctcaacagcagcatgtggggatcctcagtctacgtttgttacaagaagtccctggct
aaagccaacacaatcgcatacaaagcaggcctgctgtgtaggtaccctgaagaggactac
gagtccttcccactgcctgagtccgtgcctatgttctgcctgcccatgggggcaacagtg
gagtgctggccagaacacaccaaacactccctgcctgtgttttccacatttgtactgacg
ggtgcgtctggtgaaaaggtgtatggagctgccatccaattttatgagccttactcagag
gagaagctgtccgagcgtcagtgctcacagctcggactgccaagtgctgacggcaccagg
agtatttacagcaacaagagcatctgtctgctctcccactggccctttttccagtccttc
aggagctttctcactttcctctacagatactccatctctggaccacatgctctgcccatc
gaaaagcacatctctcacttcatgcaaaacgtgcccttcccctccactcagagaccacgc
atcctagtgcagctatctccacatgacagcctgatactcagccaacctgtgtcctccccg
ctgcctctgagtggtgggagcctctccactttactactgaatctgggcccaaagaacgca
gccaccctgctggtgttggctgtcacagagcacaagatcctggttcattccctgcgtccc
gctgtgctcacaagcgttacagaggcccttgtgtccatgatcttccccttccactggccg
tgcccgtacatccctctgtgcccgctggccctggccggtgtgctcagtgcaccgtgccct
ttcatcgtgggtgtggactcccgatactttgacctttacgtccccccagcggacatcagc
tgcgtggacctggacaccaacacaatctcccaaaaagatgacaaaaaggctctaacgtgg
aaaatcctgcccaggagagcctgcaaacatcttcttagtactctgaataagctctatcag
cagctcactgaggggggtcagatgaaccgtgaggatgttcagatggagcacacagtaacc
gaaatggagctggatggtgggaagagcctccacactctggagctggagatccaggaggcc
ttcctgagcttcatggcagccatcctacgaggctaccgttcctacttgctacccatcacc
caagccccctccgagaagaccaccgatgccagttccctctttgacatccaaggctttgta
aagagcagagaccgctctcaccagaggttctactccctcatgaccaagactcagatgttc
agccgtttcatagaggagtgctcctttgtcagtgataaggacgccagcctggctttcttt
gatgagtgtgttgataagctcttcaccactggaggcaagatggacagcgagcgtctagag
gaaaccagactgatcgaactggatgaatcccaccgcagtgagcacacggtgtatgtaaac
cctccggagctgcctcctctgccacggggagaagagcatcctctgtgctacagctactcc
gagttccctgtgctgaatgctgaactgctgcagtcgttggagggtccaaagcctccatca
gcaggcatggccccacgccacagcagccctgccagccctacggctatctttaggcgctcc
aaacaggagataaaatcagctcaaaagatggccaaaacctattcatcaatgcctcagatg
tggtccaagtgtctgctgcgccactgctacggtctttggttcatctgccttccagggttt
gtggccacctgccactcgaaggtgcgcgccctgcgtaccgcttacgatgtgctgagaaag
atgcaggacaataagttgcaggctccagatgaggtgtgctaccgtgtgctgctccagctg
tgtgggcagtatagccagcccgtcctcgccgtcagggttttgtttgaaatgaagaaagct
ggagttcaacccaacgcaatcacgtacgggtactacaacaaggcggtgttggagagcacc
tggccctccaccaccagaggaggctactttctgtggggaaaactgaggaacgtggtttta
ggtgttctcaagttcaagcacgctgggagaaaacaaccgactccgcacagagatcaccag
ctttcagatggcagcgatctcgacacagtcagtcatggcagtttggacagcgccaatgat
tctgctgagcgcacttcaatcgacaccgacttcactaaaatggactctagcgacgacgga
ttcagtacaggtggccagtcagaccaaggctacgattcactatccaaagaggaggagagg
atgtgcagcagagagagcaactattcgtcggcggtggaagacaaacgacagaggccgtcc
acagttgaggttccaatcagcagcatctcccctccaggaaacttccaatccacagttgtc
agtgctggcaacaggcaggcttcaagtccatcaagtgacgttattctgcgtggacctcgg
ctcaagtcggaaaggccaaaatctctggacttgtctggcggccatgaaagtcttagactc
accgtcccgagcttttcatccacaaagcagcatcaggcaactgctgacagactccacggg
gtggaagaagaggagacgcagactggtaaacagacacctttgatgggcagaagtatcagc
tgcggcggcgggactgtgaggagaacgggtattgatcggggcttagatccgctgtcgttg
atggcgacaggtgtgctgcaagagggcgatcaggagattagcggcccgccaacagcccgc
cgcgacctcgcggaggaaatcgagatgtacatgcacaatggcagcagccccctgagcagc
cgcacatccagtacgaacctgcagaacccttcaagcccgttgtttagacctgcctcgtct
cctcgcgactcgccgcggcccaccaccacgccgcactccaacgcacagctcccgctgccc
gcgaaacccaaggacaagctgaggccgtcgccgtctctccctctgggtctgtgtaccaaa
gacagggagaggccttcctctttggtttcaccctcctcccctactccgtcgtcctcatcg
ttttccatggattcactgttcagcccatctctggacatcttcaagagcagcgtcatatca
gcggggaagggcgtggccgagaaggcgagccgcttctactctcgtctgtcctcccagacg
tcatttacacaggaaacaaactgtgactggatcagtgtttcctcactgacctcaggggag
gccgactgctcctcgctgcttgataacgacccgtgtctggacccggatggcttcgtctct
ccccatcacggcagcgtctcccgactcaggaggagcccggttgtgggtcacaccaacctg
ggcagccccagcaaccccgacagagtgttcagacacaactccttttctggtggtctggca
cttccttctaaaatacctcgcactcctgattcctcccccgacgccagccgcttccaaccc
actcccaactacagcatggaggtgctgatgtccagctcctcactttgcaagacgtgcgac
tgtctggtgtatgatgaggagataatggccggctggacaggcaacgactccaatctcaac
agcagctgtcccttttgcggcacagccttcctgcccttcctcaatgtggaaatcaaagac
ctgagactacagagcagatcccgtctgtctcccctcgggtcttctagaaaaagtcacctt
gttacagaggagatcacgtcgccatctctcagtccggggggaaaaatgtccgcgacggac
cgcacagctccgtcacctgaggacgccgggccagccgaggtgacggtgccctacttgagc
cccttggttttgtggaaggagatggagagcctgctggtaaacgagggcgacgaagccatc
tcctccccgactgttgttgaccaacacccgatcgtcttctggaacctcgtgtggtacttc
agaaggctggagctgccgagtaacctgccagctcttatcctggcctctcagcactgtagc
cacggagaccagactcctcagagcgtttcttcagaggacagtaagcaggtgcttgtgagg
attatgtgggacaacctgaagttgcataaagacaaagaccaaccctgctatgtcttgtgg
aacacgcattgtgcaacttccctggtgcgctctgggttgtgtgaagaaggccagctcttc
actgtggagctactgcagggttttgtgaggagcattaagaaaagtgatgtttatcagccc
atgagccagatcatccagctgctggggccggagctgggttttaaaagacaaaggagcctc
tacagagatttattgttccttgcgctggtggcattgggaaagaacaacattaatatcaat
gctttcgaccgggagtacaagttggcctatgatcgtctcaaccacggccaggtaaagcta
acacacaactgtgaccggccccctggggcgggggtcatggaatgcagaaggacttttggg
gagcccagtctgtaa
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integrated database retrieval system
