Gasterosteus aculeatus (three-spined stickleback): 120809295
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Entry
120809295 CDS
T07457
Symbol
znf423
Name
(RefSeq) zinc finger protein 423 isoform X1
KO
K22870
zinc finger protein 423
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gat03000
]
120809295 (znf423)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gat03037
]
120809295 (znf423)
Transcription factors [BR:
gat03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
120809295 (znf423)
Cilium and associated proteins [BR:
gat03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
120809295 (znf423)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_4
zf-C2H2
zf-Di19
zf-C2H2_6
zf-H2C2_2
zf-C2H2_jaz
Zap1_zf1
zf-C2H2_3rep
zf-C2H2_FBX41
zf-met
zf-C2H2_ZNF462
zf-C2HE
Phage_zn_bind_3
zf-C2H2_OTU1_C
zf-C2H2_9
Motif
Other DBs
NCBI-GeneID:
120809295
NCBI-ProteinID:
XP_040018929
LinkDB
All DBs
Position
XIX:1957080..2044886
Genome browser
AA seq
1470 aa
AA seq
DB search
MSRRKQAKPRAVKAVEEGESSECGGTWDESAVHTEVPACDRDTDPKDGHRAGGEDGEAED
HEDHDDDLDDESIFTCDNCQHDFDCLAELTEHRTNHCPADGDDDPAGLSWVPSSPSSKDV
ASPSQMPDGCCDLGMATGGEEEGGAGLPYPCQFCDKSFSRLSYLKRHEQIHSDKLPFKCT
FCSRLFKHKRSRDRHVKLHTGTGDKKYSCQECEAAFSRSDHLKIHLKTHSSSKPFKCSVC
KRGFSSTSSLQSHMQAHRKNREHLALRSERDGGKKGAGGDVDLEQDLYMCDYCEETFGLT
DELEKHVLTRHPQLSDRADLQCIHCPEIFLDEASLLTHIETQHANRKHKCPVCLEQFPSV
EDVYCHLDSHRQPDSSNHSAASPDPALGSVASMSSATPDSSASLERGSTPDSTLKPSQGI
ERLRRRGMESVDDIGMTLSHKGGGGGANWGKVTYSCPYCSKRDFHSLAVLEIHLKTIHAD
KPQQSHTCHLCLDTLPTLYNLNEHVRKAHRAGGGAVGAVAVAAAAAAFPLLQFANVTAFH
CNYCPDMFGDINSLQEHIRGSHCLPGGMVAGSTTLEGNHAFFCNQCSMGFLTESSLTEHI
QQTHCASVAGGGGGGASSGGAAAKLESPVLQTSSQSFMEVYSCPYCTNSPIFGSLLKLTK
HIKENHKNIPLANNKRQAKVADLSPASSDIEVSSPKRHRLGGDLTPSAGSNGDYPCNQCD
LRFSSFEGFQAHLKSHLEMLLRRQSCPQCNKEDFESQEALLQHLTVHYTTTSTQYVCESC
DKQFSSVDDLQKHLLDMHTFVLYHCTLCQEVFDSKVSIQVHLAVKHSNEKKLFRCTACAW
DFRKESDLQIHVKHNHLGQRSGLPGGLGAGLKPRKCIFCGDTFATEVELQCHITTHSKKF
TCRFCGKAFQAMPLLERHLREKHCIFDGGSVTGNGGGAGAGSGGSHNGTPNGLAQTSKRG
GGGGGGGGSGGGGGAGGAERATVAAAEQADLQNMLLKNAVAGGGGAGQGGDAANSHEASG
GEEELDNSEPMYACDICGAAYTMESLLQNHRLRDHNIRPGDDDACSRKKKADFIKGNHKC
NVCSRTFFSENGLREHAQTHRGPAKHYMCPICGERFPSLLTLTEHKVTHSKSLDTGTCRI
CKMPLQSEEEFIEHCQMHPDLRNSLTGFRCVVCMQTVTSTLELKIHGTFHMQKLSAGSSL
GGAAGGGGGGGGNGGGGGGGGGNGSASSSPNGQLHKLYKCAFCLKDFKNKGELVKLDVNG
LPYGLCAGCMSRGTNGQSPSLGGPATPGDAQGEKAAAGLRCPECGVKFESAEDLEGHVQA
DHPEISPETSAAGKKAEASPAPKKKTYQCIKCQMTFETEREIQIHVANHMIEEPTCRPEE
GINHECKLCNQMFDSPAKLLCHLIEHSFEGMGGTFKCPVCFTVFVQANKLQQHIFAVHGQ
EDKIYDCSQCPQKFFFQTELQNHTLSQHAQ
NT seq
4413 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaggcgaaagcaggccaagccgcgcgccgtcaaagcggtggaagaaggagagtcc
tcagagtgtggaggcacctgggatgaatcagctgtccacacagaagtcccggcgtgtgac
cgagacacggaccccaaagacggtcaccgggccggcggcgaggacggggaagccgaggat
cacgaggatcacgacgacgacctcgacgacgagtccatcttcacctgcgacaactgtcag
cacgacttcgactgcctggccgagctcaccgagcacagaaccaaccactgcccggccgat
ggtgacgatgacccagcaggcctctcctgggtgccttcctcgccctccagcaaagacgtg
gcgtcgccctcgcagatgcccgacggctgctgcgacctcggcatggccaccggcggcgag
gaggagggaggcgccggcctgccgtacccctgccagttctgcgacaagtccttcagccgc
ctgagctacctgaagcgccacgagcagatccacagcgacaagctgcccttcaagtgcacc
ttctgcagccgcctgttcaagcacaagaggagccgagaccgccacgtcaagctccacaca
ggcacaggagacaagaagtatagttgccaggagtgcgaagccgcgttctcccgctctgat
cacctgaagatccacctgaagactcacagctccagcaaaccctttaagtgtagtgtgtgc
aagcgtggcttctcctccacctcgtcactgcagagccacatgcaggctcaccgcaagaac
cgagagcacctggccctgaggagcgagcgggacggagggaagaagggagcgggaggagac
gtcgacctggagcaggacctgtacatgtgcgattactgcgaggagacgttcggcctgacg
gacgagctggagaagcacgtgctgaccagacacccccagctgtcggaccgggccgacctg
cagtgcatccactgcccggagatcttcctcgacgaggcttccctcctcacgcacatcgag
acgcagcacgccaaccgcaaacacaaatgtcctgtctgtttggagcaattcccgtccgtg
gaggacgtctactgccacctggacagccaccgccagccggactcctccaatcacagcgct
gccagtcccgacccggcgctgggcagcgtggcctcaatgagctcggccactccggactcc
agcgccagcctggagaggggctccacgccggactccaccctcaagcccagccagggcatc
gagcggctgcgcaggagaggcatggagtccgtggacgacatcgggatgaccctcagtcac
aaaggtggagggggaggagccaactggggtaaagtgacgtactcttgcccgtactgctca
aagagagacttccacagcctggcggtgttggagatccatttgaagaccatccacgcagac
aagccgcagcagagccacacgtgccacctctgcctggacacgctgcccacgctctacaac
ctcaacgaacacgtgcgcaaagctcaccgtgccggcggaggggccgtgggcgcggtggcg
gtggcggcggcggcggcggctttccccctgctgcagtttgccaacgtcacggcgttccac
tgtaactactgcccggacatgtttggagacatcaactctctgcaggagcacatcaggggg
tcgcactgcctgcctggtgggatggtggcagggtccaccacattagaagggaaccatgcc
ttcttctgcaaccagtgctccatgggattcttgacggagtcgtcgctgacggaacacatc
cagcagacacactgcgcctccgtcgcggggggcggcggcggcggcgcttcatccgggggg
gcggcggccaaactggagtctcccgtactgcagacgtcgtcgcagtccttcatggaggtt
tactcctgcccttactgcaccaactcgcccatcttcggctcgctcctcaagctcaccaag
cacatcaaggagaaccacaagaacatcccgctggccaacaacaagcggcaggcaaaggta
gccgacctgagccccgcctcctccgacatagaggtctcctccccgaaacgccaccggctg
ggcggggacctcaccccctcggcggggagcaacggcgactacccgtgcaaccagtgcgac
ctgcgcttctccagctttgagggtttccaggcccacctgaagtcccacctggagatgctg
ctgaggcgccagtcctgtccgcagtgcaacaaggaggacttcgaatcccaggaggcgttg
ctccagcacctgacggtgcactacaccaccacgtcgacgcagtatgtgtgcgagagctgc
gataagcagttctcctcggtagacgacctgcagaaacacctgctggacatgcacacgttt
gtcctgtaccactgcacgctctgccaggaggtctttgactccaaggtctccatacaggtg
catttagcagtgaagcatagcaatgagaagaagctgttccgctgcacggcctgtgcctgg
gacttcaggaaggagtctgatcttcagatccacgtcaagcacaaccacctgggccaaagg
tcgggcctcccaggggggctgggagcaggactcaagccccggaagtgcatcttctgcggc
gacacattcgcgaccgaggtggagctccaatgccacatcaccacacacagcaagaagttc
acgtgtcgcttctgcggcaaagctttccaagccatgccgctgctggagagacacctgagg
gagaagcactgcatcttcgacggcggcagcgtcaccggcaacggcggcggcgccggcgcc
gggagcggcgggagtcacaacgggacacccaacgggctggctcagacctccaagcgagga
ggaggaggaggaggaggaggaggaagtggcggcggcggcggcgcaggaggcgccgaaaga
gcgacggtagcggcggccgaacaggccgacctgcagaacatgctgctgaagaacgccgtg
gcggggggaggaggagctggccaggggggagacgcggccaacagccacgaggcgagcggg
ggggaggaggagctggacaactcggagcccatgtacgcctgcgatatctgcggtgccgcc
tacaccatggagtcgctgctgcagaaccaccgactgcgcgaccacaacatccgaccggga
gatgatgacgcttgttctcgaaagaagaaggccgacttcatcaaggggaaccacaagtgc
aacgtgtgctccaggacgttcttctctgagaacgggctccgcgagcacgctcagacgcac
cgcgggcccgccaagcactacatgtgtcccatatgcggcgagcgcttcccctctctgctc
accctcactgaacacaaggtgacccacagtaagagcctggacacgggtacctgccgaatc
tgtaagatgcccctgcagagcgaggaggagtttatagagcactgccagatgcaccctgac
ctccgcaactccctcaccggcttccgctgcgtcgtctgcatgcagaccgtcacctccacc
ctggagctgaagatccacggcaccttccacatgcagaagctctccgccggctcttcgctg
ggaggagccgcgggaggaggaggaggaggaggcgggaacggtggaggaggaggaggagga
ggagggaacgggtcggcgtcctcgtcccccaatgggcagctgcacaagctctacaaatgc
gccttctgcctgaaggacttcaagaacaaaggggagctggtgaagctggacgtcaacggc
ctgccgtatgggctgtgtgctggctgcatgagcaggggcacgaacggccagagccccagc
ctggggggacccgccacgccgggggacgcgcagggagagaaggccgcggccgggctgagg
tgtccggagtgcggcgtaaagttcgagagcgcggaggacttggagggccacgtccaggcc
gaccacccggagatcagccccgaaaccagcgcggcaggaaagaaggccgaggcttcgcct
gcaccgaagaaaaagacctaccagtgtattaaatgccaaatgacgtttgagacggaacgg
gagatccagatccatgtcgctaatcacatgatcgaagagcccacctgtcggccagaggag
ggcatcaatcacgaatgcaagctgtgcaaccagatgtttgactcacccgccaagctgctt
tgccacctgatagagcacagcttcgaaggcatgggaggtaccttcaagtgtcccgtctgc
ttcacagtgtttgtgcaggccaacaagctccagcagcacatttttgccgtccacggccag
gaagacaagatctacgactgctcccagtgtccgcagaagttcttctttcagacggaacta
cagaaccacacactgagtcagcacgcgcagtga
DBGET
integrated database retrieval system
