Gasterosteus aculeatus (three-spined stickleback): 120809393
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Entry
120809393 CDS
T07457
Symbol
ddb2
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
KO
K10140
DNA damage-binding protein 2
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03420
Nucleotide excision repair
gat04115
p53 signaling pathway
gat04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120809393 (ddb2)
09124 Replication and repair
03420 Nucleotide excision repair
120809393 (ddb2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
120809393 (ddb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gat04121
]
120809393 (ddb2)
03400 DNA repair and recombination proteins [BR:
gat03400
]
120809393 (ddb2)
Ubiquitin system [BR:
gat04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
120809393 (ddb2)
DNA repair and recombination proteins [BR:
gat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
120809393 (ddb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_RIG_2nd
WDR55
Beta-prop_EIPR1
Beta-prop_TEP1_C
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
120809393
NCBI-ProteinID:
XP_040019095
LinkDB
All DBs
Position
XIX:complement(17552266..17556482)
Genome browser
AA seq
488 aa
AA seq
DB search
MKTRQTKSADANAKPKKATAGSSGPALSKKLRYRKHGETSKGPPATPAGVQRRGGYSSIL
HYIYKSSLGETLHSQMRRCLQQPFVRSLSSYHFHGATSPFNRRITCLEWHPAHPTTLAMG
SKGGDIYLWDFEVPTKKVFLQGSGAGDFIGGMKFCPTDLSQVYVASGEGTLTTQSFEGGR
TPTVLSRTQDCGHDHHNVCFWYCCVDVSISRRMLVTGDNVGQLVLLGLDGQKIFSNKLHK
AKVTHAEFNSCCDWLLATASVDHTVKLWDLRNIKDKQSFLHEMPHEKAVNSAYFNPLDCS
KLLTTDQYDEIRVYSSSDWSKPQHIIQHPHRQFQHLTPIKATWHPIYDLIVAGRYPDDRV
FPGDQRTIDVYDANTSELVCQLQDPSAPGIKSINKFNPMGDVIGTGMGVTALVWNRDKSL
IGEQPKGQEESSTSAGSLRGQQRSRQRSSRDGRAPAMDAKLKKKLASLEESETKTGCTKQ
KPTRMRKK
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaagacagacgaagtccgcagatgcaaatgctaaaccgaagaaagcgacagcg
ggaagttcaggtccagcgctctccaaaaaactacgatacagaaaacatggagaaacatcc
aaaggtcctcctgctacgcctgcaggggttcagaggagaggagggtacagcagcatcctg
cactacatttacaagagcagtctgggagaaacccttcactcccagatgaggcggtgtctg
cagcaaccctttgtccgctcgctgtcgtcctatcacttccacggtgccaccagccccttc
aaccggagaatcacctgcctggagtggcaccccgctcatcccaccacactggccatgggc
tccaagggcggcgacatatacctgtgggattttgaggtgcccactaaaaaagtctttctt
caagggagcggagcgggagactttatcggagggatgaagttttgcccgacggacctttcc
caagtctacgtggcttctggcgagggcacgttgaccacgcagagcttcgagggcggccgc
acgcccaccgttctgtccaggactcaagactgtggccacgatcaccacaacgtctgtttc
tggtactgctgcgtggatgtgtctataagtcgacggatgctcgtgaccggagacaacgtg
ggacagctcgtactcctgggtttggatggccaaaagattttcagtaacaagctgcacaaa
gccaaagtgacccatgcagagttcaactcctgctgtgactggttgttggcaacggcctca
gtcgaccacactgtgaaactttgggatctgagaaacatcaaagacaagcagagcttcctc
catgagatgcctcatgagaaagctgtgaactcggcctatttcaacccgttggactgctcc
aagctgctcaccaccgatcagtacgacgagatccgggtctactcttcttctgattggtcg
aagcctcaacatatcatccaacatccacacagacagttccagcatctcacacccatcaag
gccacatggcaccctatctatgacctcatcgtggcgggccgctaccctgatgaccgggtt
ttccctggagatcagaggaccatcgacgtctatgatgccaacacatccgagctcgtgtgt
cagctgcaggatcccagcgctccaggaatcaaatctatcaacaaattcaatccaatgggt
gatgttattggaactggaatgggtgtgacggcgctggtgtggaacagagacaagtcgttg
atcggtgagcagcccaaagggcaggaggaatcttctacctctgcaggcagtttaagaggg
cagcagaggagtcggcagcgctccagcagggacgggagagctcccgctatggatgccaag
ctcaagaagaaactggcttctctggaagaatcagagaccaagaccggctgcaccaaacaa
aaaccgacacggatgaggaagaagtaa
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