Gasterosteus aculeatus (three-spined stickleback): 120809605
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Entry
120809605 CDS
T07457
Symbol
cnot2
Name
(RefSeq) CCR4-NOT transcription complex subunit 2 isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120809605 (cnot2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gat03019
]
120809605 (cnot2)
Messenger RNA biogenesis [BR:
gat03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120809605 (cnot2)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
120809605 (cnot2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
120809605
NCBI-ProteinID:
XP_040019466
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All DBs
Position
XIX:6382058..6388180
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AA seq
532 aa
AA seq
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MFGARKKFVEFVEVVDNDFADESMYYSQSSMFPHRSDKDSSNVFLQMLSSPSPSSSSGQL
SQLGASLYGPQSALGFSVRGIGNSTPQLNRNLTQGTQLPSHITPTTGVPTMSLHTPPSPS
RGTLPMNTRNMLNHSQVGQGIGMSGRTNSMGSSGLGSPNRSSPSIICMPKQQPARQPFTI
NSMSGFGMNRNQGFGMNNSLSSNIFNGTDGSENVTGLDLSDFPALADRSRREGTGNPTPV
LNPLAGRAPYVGMVTKPSTEQTQDFSIHNEDFPALPGPNYKDPTLNNDDSKTNLNSNTSK
STSNADGPKFPGDKTTTAQNNNQKKGIQVLPDGRVTNIPSGMVTDQFGMIGLLTFIRAAE
TDPGMVHLALGSDLTTLGLNLNSPENLYPKFASPWASSPCRPQDIDFHVPSEYLTNIHIR
DKLAAIKLARYGEDLLFYLYYMNGGDLLQLLAAVELFNRDWRYHKEERVWITRAPGMEPT
LKTNTYERGTYYFFDCLNWRKVAKEFHLEYDKLEERPHVPTTFNYNPAQQAF
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtgctagaaagaaatttgtagagtttgtcgaggtagtcgataatgacttcgct
gacgaaagcatgtactacagccagtcgtcgatgttcccacatcggtcggacaaagattct
tcaaatgttttccttcagatgctgtcgtctccctcgccgtcgtcgtcgtcgggtcagctg
tcgcagctcggtgcaagtttgtatggtccgcaaagtgcacttggcttctcggtgaggggc
atagggaacagcacgccgcagttaaatcgaaatctaacacaaggcacgcagctaccaagt
catatcacccccacgaccggggtccccaccatgtccctccacacccctccgtcaccaagc
agggggacgttgccgatgaacacgaggaacatgttgaaccactctcaggtcggtcaaggc
attgggatgagtggcaggaccaatagcatgggcagctcggggctcgggagtcccaaccgc
agctcgcccagtatcatctgcatgcccaaacagcagccggcacgccagccgttcaccata
aacagcatgtcaggctttggtatgaatcgcaatcaggggtttgggatgaacaactcgtta
tcaagcaacatcttcaatggcacagatgggagtgaaaatgtaacgggactggatctgtca
gacttccctgcgttagcagacaggagtcggagagaagggactggaaacccaacaccggtg
ctcaacccactggctggacgggctccttatgttggcatggtgacgaagccgtcgacggaa
caaacacaggatttctccatccataacgaggacttccctgcgctgcccgggccgaactac
aaggaccccacgttgaacaacgacgacagcaaaaccaacttgaactcaaacacaagcaag
agcacatccaatgcagatgggcccaagttccccggagacaagacgaccacagcacagaac
aacaaccagaagaaagggatccaggtgttgcccgatggtcgggtgacgaacatcccctca
ggaatggtgacggaccaattcggcatgattggcctgctgacgtttatccgggcagcggag
accgatccggggatggtacatctggcgctcggaagtgacctcacaacgctgggactcaac
ttaaactcaccggaaaacctgtacccaaagtttgcctctccttgggcctcatcgccatgt
cggcctcaagacatcgacttccacgttccgtctgaatacttaaccaatatccacataagg
gacaagttggctgcaattaaactggcacgatacggtgaagacctgttgttctacctgtac
tacatgaatgggggagacctgctacagcttctggcggcagtagagcttttcaaccgggac
tggaggtaccataaagaagagcgggtttggataacgagggcgcccggcatggagcccacg
ctgaagaccaacacctacgagcggggaacctactacttttttgattgtctcaactggagg
aaagtagccaaggaattccacctggagtacgataagcttgaagagaggcctcacgtgcca
acgacattcaactacaacccagcgcagcaggccttctaa
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