Gasterosteus aculeatus (three-spined stickleback): 120809626
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Entry
120809626 CDS
T07457
Symbol
rag1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
120809626 (rag1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gat04121
]
120809626 (rag1)
Enzymes [BR:
gat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120809626 (rag1)
Ubiquitin system [BR:
gat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120809626 (rag1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-C3HC4
zf-C3HC4_2
zf-RING_10
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4_4
zf-RING_2
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
120809626
NCBI-ProteinID:
XP_040019505
UniProt:
G3PC31
LinkDB
All DBs
Position
XIX:9903631..9910310
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AA seq
1073 aa
AA seq
DB search
MAEESLETDGHRSSMPAELCHPHSKYSQWKFKLFRLKSMEKVPLPTETRPEEGALSGIPP
PAALNIEVDNGTGAESVMKLCLGGKSKENVEGPGRRVDMKLQEMDTHMNHLRCLCRLCGM
ALRTVKGPVHDVNGDLDEVSKGALRKMGCKFTSWPEVILKVFKVDVKEDTESVHPLSFCH
RCWVVTIRGGGFCSFSRTRVPEWKPHSSTCNLCSPRKPSFQRTGRKRRKAIPRAQSLAKR
ARRDPGDCIVVGERKALRPFGDNRHGPVLRAQGQLSIQREHWVKNITHCQRDHLNTKLIC
EKLPVDFLYSFTCLVCDHLLSDPVQSPCRHLFCRSCIVKYNRVLGPHCPACNASCAVEEL
APPAKAFLSALHSLPLLCPRSGCGQQSRLDSFRAHCQGHDLDEQDDKQPSAELDNYLRTN
KGGRPRQHLLSLTRRAQKHRLRDMKNQLKVFADKEEGGDLRSVCQTLFLLALRSGNEHRR
ADELEAMMQGRGFELHPAVCLAIRVNTFLSCSQYHKMYRTVKATSGRQIFQPLNTLRAAE
KGLLPGFHQFEWQPALKNVSTSCTVGIINGLSGWASSVDDFPADTTTRRFRYDVALVSAL
KDLEEDILEGLRESGMEDSACTSGFSVMIKESCDGMGDVSEKHGGGPPVPEKAVRFSFTV
MSVSVLADEEVEEVTIFTEAKPNSELSCKPLCLMFVDESNHETLTAVLGPIVAERNAMKE
SRLILSVGGLPRSFRFHFRGTGYDEKMVREVEGLEASGSTYVCTLCDSTRAEASKNMVLH
SITRSHEENLDRYEIWRTNPFSESVEELRDRVKGISAKPFMETQPTMDALHCDIGNATEF
YKIFQDEIGEVYRKVNPSREERRSWRAALDKQLRMKMKLKPVMRMNGNYARRLMTQEVVE
VICELVPSEERREALRELMRLYIQMKPVWRATCPAKECPDQLCSYSFNSQRFADLLSSTF
KYRYNGKITNYLHKTLAHVPEIIERDGSIGAWASEGNESANKLFRRFRKMNARQSKAFEL
EDVLKHHWLYTSKYLQKFMEAHKDSAKALQATIDPEASQDCENVFSSLEVNDF
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggagagcctggagacagacggccacagatcctccatgccggctgagctctgc
catccccactctaagtactctcagtggaagttcaaactgtttaggctgaagtccatggag
aaggtacctttgcccactgagacacggcctgaggaaggagccctgtcagggatccctcct
cctgcagctttaaacatagaggttgacaatggcacgggtgcagagagtgttatgaaattg
tgcctagggggaaaaagcaaggaaaatgtggagggccctggccggagagttgatatgaaa
ctacaggaaatggacactcacatgaaccatctcaggtgcttgtgccgtctatgcggaatg
gccctgcgaacagtcaaaggtccggtgcacgatgtcaacggggatctggatgaggtcagc
aaaggcgctttgcgtaaaatgggctgcaagtttacaagctggccagaagttattctcaaa
gtctttaaagtggacgtgaaggaggacaccgaatccgttcaccctctttccttctgccat
cgctgctgggtggtgaccataagaggaggaggcttctgtagcttctccagaacaagagtc
cctgagtggaaaccccactcttccacctgcaacctttgctcccccaggaaaccttcgttt
cagcggactggcaggaagaggcgcaaagccattcccagagcgcagagtctggcaaaaagg
gccaggagggaccccggcgattgcattgtggttggtgagaggaaggctctcagaccattt
ggagacaaccgtcatggtcctgtgctaagggcacagggacaactcagtatccagagagag
cactgggtgaagaacatcacccactgccagagagaccacctgaataccaagctgatctgt
gagaagctccctgtagacttcctctattctttcacctgcctggtgtgcgaccacctgctt
tctgatccggtgcagtccccctgtagacacctcttctgccgcagctgtattgtaaaatac
aaccgcgtcctgggacctcactgcccggcctgcaacgcgtcctgcgctgttgaggaactc
gccccgcccgctaaagccttcctatcagccctgcattccctgcctttgctctgcccccgg
agcggctgtggccagcagtccaggctggactcattcagagctcattgtcagggccatgat
ctggatgaacaggacgataagcagccgtcagcagaactcgacaactacctgcgaaccaac
aaaggggggagacctcgtcagcacctgctgtcactgacccgccgtgcccagaagcatcga
ctgagggacatgaagaaccagctgaaggtgtttgcagataaagaggaggggggcgacctg
aggtctgtgtgtcagactctgttcctgcttgcactgaggtccgggaatgaacaccgtcgg
gcggatgagctagaggccatgatgcaaggaagaggctttgagttgcatcctgctgtgtgc
ttagccattcgcgtcaacactttcctgagctgcagccaatatcacaagatgtaccggact
gtcaaagccaccagtggccgccagatctttcagcccctgaacaccctgcgggccgcagag
aaggggcttctccccggcttccaccagtttgaatggcaaccagcactcaagaacgtgtct
acgtcctgcaccgttggcatcattaatgggctctctggatgggcctcctcggtggacgac
ttccctgctgacaccaccactcgacggtttcggtacgacgtggctctggtgtcagcttta
aaggatctggaggaggacatcctggaggggttgagagagagcggcatggaagacagcgct
tgcacctcaggcttcagcgtcatgatcaaggagtcctgtgacggcatgggcgacgtcagc
gagaagcacggcggaggaccacctgttcctgagaaggctgtgcgtttttcttttactgtc
atgtctgtctctgtgctggcagacgaggaggtggaagaagttaccatcttcactgaggca
aagccaaactcagaactgtcctgtaagcctctttgcttgatgttcgtggatgagtcgaac
cacgagacgctcacagctgtcctggggccaatagttgccgagcgcaatgcgatgaaagaa
agcaggctcatcctctccgtgggcggactccctcgctccttccgctttcacttcaggggc
acgggatatgatgagaagatggtgcgcgaggtagagggcctggaggcgtcagggtccacc
tacgtctgcactctttgcgactccactcgcgcggaggcctctaaaaacatggtgctgcac
tccatcacccgcagtcacgaagagaacctggatcgttacgagatatggagaaccaacccg
ttttctgaatctgtggaggagctgcgggacagagtcaaagggatctctgccaaacccttc
atggagacccagcccacgatggatgcactgcactgtgacatcggcaacgccacagagttc
tacaagatcttccaggacgagatcggggaggtgtaccgaaaggtcaaccccagtcgggaa
gaacggcgaagctggagggcggcgctggacaaacagctcaggatgaagatgaagctcaaa
ccggtgatgaggatgaatgggaactacgcccgccggctaatgacccaagaggtcgtggag
gtgatttgtgagctggtgccctccgaggagaggagggaggccctgagggagctgatgagg
ctctacatccaaatgaagcctgtgtggcgcgccacctgcccggccaaggagtgccccgac
cagctctgcagctacagctttaactcccagcgcttcgccgaccttctctcctccaccttc
aagtacaggtacaacggaaagataaccaactacttgcacaagactttggcccatgtgcct
gaaatcatagagagagatggatcaataggagcctgggccagcgaggggaacgagtcggct
aacaagctcttcaggcgtttccggaagatgaatgcgcgtcagtcgaaggcctttgagcta
gaggacgtgttgaaacatcactggctctacacctccaagtacttgcagaagtttatggaa
gctcacaaggactctgctaaagctctgcaagccaccattgacccagaagcaagtcaggat
tgtgagaacgtcttctcttctctggaagttaatgacttttga
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