Gasterosteus aculeatus (three-spined stickleback): 120809683
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Entry
120809683 CDS
T07457
Name
(RefSeq) transcriptional repressor CTCF-like isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gat03000
]
120809683
03036 Chromosome and associated proteins [BR:
gat03036
]
120809683
Transcription factors [BR:
gat03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
120809683
Chromosome and associated proteins [BR:
gat03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
120809683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
Zf-C2H2_ZNF451_C
zf-C2H2_7th_ZNF462
Zf-C2H2_ZNF451
zf-met
zf-C2HE
zf-C2H2_6
zf-C2H2_15
zf-C2H2_ZN142
Motif
Other DBs
NCBI-GeneID:
120809683
NCBI-ProteinID:
XP_040019611
UniProt:
A0AAQ4PTA2
LinkDB
All DBs
Position
XIX:1587087..1598938
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AA seq
889 aa
AA seq
DB search
MRIIPLIEQHNCNNTIQHSKQQIKTSMLFFNQFLPIMDSGPTEGAGGVEVPPKDFPSIQA
VHSQDMVADLLQQAAEAGGVMEGHGGVVLEQGHGDGMVAAAQHQLMEAAVGVGVDGGASV
EMMVMDSLDPIPLLQMKTEVIDSAVGGSSATLGVVGGVAGAAHQATVTTVDQTQIITLQV
VNMEEQAALGLGELQLVQVPVSATTVEALQQGTFVDTTAMPKDGDPVICHTLPLPEGFQV
VKVGANGEVETVEQEDEGEAHPEEEEEEDEEVGNQLLDEVEEPIHPQNDDASWAKDPDYQ
PPHGAFKKPKKGKKSRLRYGEGDKDMDVSVYDFEEEQQEGLLSEVNAEKVVGNMKPPKPT
KIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNT
HTGTRPHKCTDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTG
ERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVA
KFHCPHCDTVIARKSDLGVHLRKQHSFIETGKKCRYCDAVFHERYALIQHQKSHKNEKRF
KCDMCDYCCRQERHMVMHRRTHTGEKPYACSQCEKTFRQKQLLDMHFKRYHDPNFIPTAF
VCPKCSKTFTRRNTMVRHSENCNGEVEDAENGAPAPKKGRRGRKRKMRSRRDEEDSEDDN
AELDEEEEEEDEEEEEEDGEGVGEEETSLLQEEEEEEEPESMELDQAPAAIPVPAPDEPP
VKRKRGRPPKNAPKPPPTPSRSARVAAKAAASAAALVQLEDESTGAVENITVKKEDSQAP
EATPAEQGAAPAAEGAETVELPVNEDTASAAAAANGDLTPEMILSMMDR
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgcgaataattccgctgatagaacaacacaattgtaacaatacaatacaacactcaaag
caacagatcaagacgtcaatgctgtttttcaaccagttcctacccatcatggacagcggg
ccaacggagggtgcagggggcgtggaggtcccgcccaaagacttcccctcgatccaggct
gttcacagtcaggacatggtggctgacctcctccagcaagctgcagaagccgggggcgtg
atggagggacacggaggagtcgtcctggaacaaggtcacggggacggaatggtagcagca
gcccagcaccagctgatggaagcggcggtgggggttggtgtggatggtggggcaagtgtt
gaaatgatggttatggactcactggatcccatccccctgttgcagatgaagactgaggtc
atagattctgcagtggggggatcatcagcgacactcggtgttgtcggtggggtggcgggt
gccgcccaccaagccaccgtaaccacagtggaccagactcaaatcatcacacttcaggtg
gtgaacatggaggaacaggctgctctgggtcttggggagcttcagctggtccaggtgccg
gtctctgccactaccgtggaggccctgcagcaaggcacctttgtagacaccactgccatg
ccaaaggacggggacccggttatctgccacacgctgccgctgccagaaggctttcaggtg
gttaaggtgggagctaatggggaggtggagacagtggagcaggaggacgaaggagaagca
caccctgaagaggaggaagaagaagatgaggaggtggggaaccagctgctggatgaagtg
gaggaacctattcatcctcagaacgacgacgcgagttgggccaaagacccggactatcag
cccccacacggcgcattcaaaaagcccaagaagggcaagaagagccgtctgcgttacggt
gaaggagataaagacatggatgtcagtgtctacgactttgaggaggagcagcaggagggc
ctcttgtctgaggtcaatgctgagaaagtggtgggcaacatgaagccacccaaacctacc
aagatcaagaagaaaggcgtgaagaagacgttccagtgtgagctgtgtagctacacgtgc
cctcgacgctccaacctggaccgacacatgaagagccacacggacgagagacctcacaaa
tgtcacctgtgtggaagagccttcaggacggtgaccctgctgaggaaccatctcaacacg
cacactggaactcgtccgcacaagtgcacggactgcgatatggcgtttgtgaccagcggc
gagttggtccgccatcgtcgctacaaacacacgcacgagaaacccttcaaatgctccatg
tgtgactacgccagtgtggaggtgagcaaactaaagcgtcacatccgctcccacactggg
gaacgtccattccagtgcagcctttgcagttatgccagcagagacacgtacaagctgaag
agacacatgagaacacactcaggagagaaaccttacgagtgctacatctgccacgcccga
ttcacccagagtggaaccatgaagatgcacattctgcagaaacacacggaaaacgtggca
aaattccactgcccacactgtgacacggtcatcgcacgcaagagtgacttgggggtccac
cttcgtaagcagcactccttcatcgagaccggaaagaagtgtcgttactgcgacgccgtt
ttccatgagcgctacgccctgatccagcaccagaagtcccataagaacgagaagaggttc
aaatgtgacatgtgcgactactgctgccgccaggagcgccacatggtcatgcatcggcga
acgcacaccggggagaagccgtacgcctgcagccagtgtgagaagaccttccggcagaag
cagttgctggacatgcacttcaaacgctaccatgaccccaacttcatccccacggccttc
gtctgccccaagtgtagcaagaccttcactcgcaggaacaccatggttcgccactccgag
aactgcaatggtgaggtggaggatgccgagaacggagccccagccccgaagaaaggaagg
cgagggaggaagaggaagatgaggagcaggagagatgaagaagacagcgaggacgataat
gctgagttggatgaagaagaagaggaggaggatgaggaggaggaggaagaggacggagaa
ggtgttggcgaggaagagacctcactgctgcaagaagaagaagaagaggaggagccagaa
agcatggaactggaccaggcccccgctgccatcccagtaccagctcctgacgagccacct
gtcaagaggaaacgaggccgtcccccaaagaacgctcccaagccgcctcccacaccgagc
agatccgccagggtggccgccaaggcagcggcttctgccgctgctctcgtccagctggag
gatgagagcaccggcgcagtggagaacatcacggtgaagaaggaggacagccaggcgccc
gaagcgacgcccgccgagcagggagcggccccggcggcggagggggcggagactgtcgag
ctgcccgtcaacgaggacacggccagcgcagcggcagctgccaacggagacctgactccg
gagatgatcctcagtatgatggaccggtga
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