Gasterosteus aculeatus (three-spined stickleback): 120809712
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Entry
120809712 CDS
T07457
Symbol
lrrc4cb
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120809712 (lrrc4cb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gat04515
]
120809712 (lrrc4cb)
Cell adhesion molecules [BR:
gat04515
]
Immunoglobulin superfamily
NGL family
120809712 (lrrc4cb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_14
LRR_1
ig
V-set
LRR_9
Ig_2
LRRNT
Ig_6
Syndecan
Motif
Other DBs
NCBI-GeneID:
120809712
NCBI-ProteinID:
XP_040019660
UniProt:
A0AAQ4Q4F7
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Position
II:21099704..21135999
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AA seq
631 aa
AA seq
DB search
MVNKMISSLQRQTMRGRRLKGALSNPLFVLLLALQILVVAGLVRAQTCPSVCSCSNQFSK
VICTRRSLRDVPDGISTNTRYLNLQDNLIQVIKVDSFKHLRHLEILQLSKNHIRNIEIGA
FNGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISEGAFKDLSNLRYLNLGMCNLKEIPNISPLVRLEELEMSGNQLSVVKPSSF
LGLVNLQKLWMMHAQVQTIERNSFDDLQSMVELNLAHNNLTFLPHDLFTPLHRLERVHLH
HNPWNCNCDILWLSWWLKETVPANTSCCARCHSPAVFKGRYIGELDHSYFQCDVPVIVEP
PSDLNVTEGMGAELKCRTSSLTSISWLTPNGSLVTHGAYKVRLSVLNDGTLNFTSVTMQD
TGTYTCMVSNTAGNISASAVLNVTSVENSGVTYFTTVTVETIETPGDDSQTPLPPFGWVS
SSTTRGTPVSTKTTERTYTIPVLDPDGEGPLNGLDEVMKTTKIIIGCFVAITLMAAVLLV
IFYKMRKQHNQQDPDGPASSMEVITVEEELAGVAAMERHLSMPPLEHYNHYNTYKSSYHH
GPMLSTIHSSVTQEPLLIQACSKDNVQETQI
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggtgaacaaaatgatctcctccctccagcgccagacaatgagaggtcgtaggctgaag
ggggcgctgtccaaccccctctttgtgctgcttctggccctccagatcctggtggtggcc
gggctggtcagagcgcagacttgtccttccgtctgctcatgcagcaatcagttcagcaaa
gtcatatgcacccgccgcagcctgcgggacgtcccagatggcatttcgacaaacactcgc
tacctgaacctccaggacaacctaatccaggtcatcaaggtggacagttttaaacacctg
cgccatctggagatcctgcagttgagcaaaaaccacattcgcaacattgaaattggcgcc
ttcaatggactggccagcctcaacaccttggagctctttgataatcggcttacgacaatc
cccaatggagcatttgagtacttgtccaagctgaaggaattgtggctacggaacaacccc
atcgaaagtataccatcttatgccttcaaccgggtcccctcgctccgaaggctggatcta
ggcgagctcaaacgtctctcctacatttctgaaggagccttcaaggacttgagcaacctg
cgctacctaaatctgggaatgtgcaacctcaaggagatccccaacatctcacccttggtc
aggctcgaggagctggaaatgtctggaaaccagctgtccgttgtgaagcccagctcattt
ttaggattggtgaacctccagaagctgtggatgatgcacgcccaggtccaaactatcgag
aggaactccttcgacgaccttcagtcaatggtggagctcaacctggctcacaacaacctc
acctttctaccacacgacctcttcacgccactgcatcgcttggagcgggtccacctccac
cacaacccctggaactgcaactgtgatatcctgtggctcagctggtggctgaaggagacg
gtacctgccaacaccagctgctgcgcccgttgccattctcctgcggtctttaaaggtcgc
tacattggggaattggaccacagctacttccagtgcgatgttcccgtcatcgtggagcca
cccagcgacttgaacgtgacagagggcatgggcgccgagcttaaatgtcgtacaagctcg
ctgacgtccatcagctggctcacgccaaacggctcgttggtgacccacggggcttacaag
gtgcgtctctctgtactcaatgacgggacgctgaactttactagcgtcacgatgcaggac
actgggacttacacctgtatggttagcaacacagcgggcaacatttctgcctccgctgtg
cttaatgtcacttctgtggaaaacagtggggtgacctattttaccacagtcaccgtggag
accattgagaccccgggggacgatagccaaacgccgcttcccccatttggctgggtgtca
tcctccacgacgagaggtactcccgtttcaacaaagaccacagagcggacttacacaatt
ccagttctcgacccagatggagagggtcccctcaacggtctggatgaggtgatgaaaacc
accaagattatcatcggctgcttcgtggccatcacgctcatggctgctgtgcttctggtc
attttctacaagatgaggaagcagcacaaccagcaggatcccgatggccccgcctcctcc
atggaggtcataacagttgaagaagagctcgcaggtgtcgctgccatggagaggcaccta
tcgatgccccccctggagcactacaaccactacaacacctacaagagctcctaccaccac
ggtcctatgctcagtaccatacacagctcggtcacacaggaacctttactgatccaagcc
tgctcaaaagacaatgtacaagagacccagatctga
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