Gasterosteus aculeatus (three-spined stickleback): 120809730
Help
Entry
120809730 CDS
T07457
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120809730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gat04121
]
120809730
Enzymes [BR:
gat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
120809730
Ubiquitin system [BR:
gat04121
]
Ubiquitin ligases (E3)
HECT type E3
120809730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
120809730
NCBI-ProteinID:
XP_040019686
LinkDB
All DBs
Position
XIX:complement(3362110..3370229)
Genome browser
AA seq
1008 aa
AA seq
DB search
MFSWGEDAHRGFRLKDGANNDRGPSADSGVRRLELGYRLAGLSAGRSALAFVKANGNAFV
IVRKQSRGGKQKFVKCKEKIQAVGCHGDDSDVVVLLLSEGGRVFFVDTHAYNPKPLEALC
NIPVSQVACGGQHSVALTKGGQVYTWGRNSRGQLGLGRSETCIDSPQRLGGLSALPLVLV
AAGGEQSFALSVSGAVFGWGRNDRGQLGLGDTADRHTATPVHCLNKKSIIHISCGKDHTA
ILTKNAAVFTFGSGQYGQLGHNSFRDELRPRLVAELWGAKVAMIACGRNHTLALTESKRV
YSFGCGDQGQLGHGKESHPSVPLPVQLLQDATDAQIGNIFAGGNCSFATCTPTEGIHEEA
NAAGIKTQHCLNDMIDKWTLEYDSKTWKKIKQEIQRTFSSASCVNTIFLEQSKDKHFQTS
PKYSGLNLSVARLAFEKLVKQDNVFAEVEASLLHLLPSLDKKPLGVEGLRIYLLLNELLH
VIQRHKQDRSSTTLAKAIAVSLLNLSADSLQVIGDWWSSLPTSTMVEHVNVWKQALSVML
SSRTVSHYFGPRNLALVLQNMYNVNSRTAEPRRMPETDFCLLIDKQFLWEDVCVWICTQL
KPLQNVPVQPFILCSFPFLMDLESKKFVFDLSAEITKNNAQDSLSDMFWTFSEESFDLTL
TRASILDDTFEQLAAVNPEEYKLPLMIFFLENDTDVNDLNLYKKDFFHEVFHEMMSTCMF
MFNDSKTLAWFPSKATEVDERYFYFGVLCGLALYNQHIIHLPFPLALFKKLLGVKPSLGD
LIEFSPCVGESLLNILEDYEDDDIQKLDMDFVIYWDDKEVDLDTKNPGKPLTGQNKKEFV
EAYVNHAFNTSVEGVFQEFKQGFFKVCHQDLVKLFQPKELQEVLVGKDFHDWAKLKQNTG
YEGVYRTTPPHPTIQMFWEVFDELTEDQRRAFLWFVTGSERVPTLGLDKIKMTIKVKEVE
DLCYDEYYPQTHTCFSTLELPLYSTKEIMHTKLTEALSKNRKIYSDCI
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgttctcgtggggagaggacgcccaccggggcttccggctcaaagacggagcgaacaat
gacagggggccctcggcggactccggggtccgtcgtttggagctcggttaccggctcgcg
ggtctgtccgcgggccgcagcgcgctcgccttcgtcaaagccaacgggaacgcgttcgtc
atcgtcaggaagcagagccgaggcgggaagcagaagttcgtgaagtgtaaagagaagatt
caggccgtgggttgccatggtgatgatagtgatgtggtggtcctgctactgtccgaggga
ggaagggttttctttgtggatactcacgcttacaatccaaagcccctggaagctctttgt
aacatacctgtgtctcaggttgcttgtgggggccagcactcagtggccctcaccaaaggt
ggtcaggtgtacacatggggccggaactccaggggccagctgggtctggggaggagtgag
acctgcatcgactcgccccaacgcctggggggtctgtcagcgctccccctggtcctggtg
gcagcaggaggggaacagagcttcgccctctccgtctccggggccgtgttcggctggggc
cgaaacgaccgcgggcagctggggctgggagacacagcagacagacacacggcaactcct
gttcactgtctgaacaagaagtcaatcattcacatttcctgcggaaaggaccacactgcc
attctgacaaagaacgctgccgtgttcaccttcggctccgggcaatatggacaacttggg
cacaactcattcagagacgaattacgaccacggctggttgcagagctctggggggcaaag
gtcgccatgattgcttgtggacggaatcacacattagctttgacggagtcaaagagggtc
tactccttcggctgtggagaccagggccagctgggccacgggaaggagagtcatccgtct
gtgccactgcccgttcagctgctacaagatgcaactgatgctcaaattggaaacatcttc
gcagggggaaactgttcctttgcaacgtgcacgcctactgagggcatccacgaggaggca
aatgccgccggcatcaaaacacagcattgtctcaatgacatgattgacaaatggaccctc
gaatacgattcaaagacatggaaaaagatcaaacaggaaatccagaggacattctcctcc
gcttcctgtgtcaatacaatcttccttgagcagagcaaagacaaacatttccagacttca
ccaaagtattcaggcttgaatttgtcagttgcacgactcgcttttgagaaattggtgaaa
caggacaatgtttttgctgaggttgaggcttctctcctccacttgcttccttcccttgat
aagaagccattgggagtggaggggttgaggatctacctgcttctcaacgaactcctgcat
gtgatccaaaggcacaaacaggatcgatcgagcacaactctcgccaaggcgatcgctgtt
tccctcctaaacttgtccgctgacagtctccaggtcataggggactggtggtcctcactg
ccaacctccaccatggttgaacatgttaacgtgtggaagcaggccctctcagtgatgctc
tcctcaaggactgtttctcactacttcggacccagaaacttggcgctagtcctccagaac
atgtacaacgtcaacagcaggacagcagaacctcgacggatgccagaaacggatttctgt
ttgttgattgacaaacagtttctctgggaggatgtgtgcgtttggatttgtacacaactc
aagcctcttcagaacgtgcccgtgcagccatttatcctgtgtagctttccatttcttatg
gatcttgagtcaaagaaatttgtttttgacctgagtgctgagatcacaaagaataatgca
caggactctctttccgatatgttttggacgttttctgaggagtcctttgacctaaccctg
actcgagcatccatcttagacgacacctttgaacagcttgctgctgtgaatcctgaggaa
tacaagttaccactcatgattttttttttagagaacgacacagatgtaaatgatcttaat
ctctacaaaaaagatttttttcacgaagtgtttcacgagatgatgtcaacttgcatgttt
atgttcaacgactccaaaacactggcctggttcccctccaaagcaacagaggtggacgag
agatacttctactttggggttctgtgtggattggctttgtacaaccagcacatcatacac
ttacccttcccactggcactgttcaagaagctgctcggtgtaaagccatcactcggtgac
ttgatcgaattcagcccatgcgttggagagagtctgcttaacatcctggaagactacgaa
gatgacgacatccaaaagctcgacatggattttgtaatttactgggatgacaaagaagtt
gaccttgatactaaaaatcctggaaagccactgacagggcaaaataagaaggagtttgtg
gaggcctacgtgaaccatgccttcaacacatcggtggagggtgtgtttcaggagttcaag
caaggcttcttcaaggtatgtcaccaggatttggtgaagctgttccaaccaaaagagctg
caggaagtgctggtgggcaaagacttccatgactgggcaaagctgaaacagaacactggt
tatgagggggtgtaccgtaccacaccacctcaccccaccatacagatgttttgggaggtt
tttgatgaactgactgaggatcagaggagagcttttctttggtttgtgactggctctgaa
agggttcccactcttggcctggacaagatcaagatgacgatcaaggttaaagaagttgag
gacctctgctatgacgagtactaccctcagacacatacatgtttctcaaccctggagctg
cccttgtactccaccaaggagatcatgcacaccaagcttacagaggccctgagcaagaat
agaaaaatctactctgactgtatatga
DBGET
integrated database retrieval system
