KEGG   Gasterosteus aculeatus (three-spined stickleback): 120809731
Entry
120809731         CDS       T07457                                 
Symbol
lamb4
Name
(RefSeq) laminin subunit beta-4
  KO
K06245  laminin, beta 4
Organism
gat  Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04510  Focal adhesion
gat04512  ECM-receptor interaction
gat04518  Integrin signaling
Brite
KEGG Orthology (KO) [BR:gat00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    120809731 (lamb4)
   04518 Integrin signaling
    120809731 (lamb4)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    120809731 (lamb4)
SSDB
Motif
Pfam: EGF_laminin Laminin_N EGF_LMN_ATRN LAMININ_IV_B LAMB4 LAMB1 F5_F8_type_C
Other DBs
NCBI-GeneID: 120809731
NCBI-ProteinID: XP_040019688
LinkDB
Position
19:complement(15701513..15725449)
AA seq 1810 aa
MRQSISESSRVYQTSLHNMIFLFIIIFLPGVRQQESQKDPCLSGSCNPQLGDLMVGRSTQ
LSASSTCGLDEPQNYCIIGYLEEEQKCFTCDSRLPYDRYGNTHSHRIENVITTFDPERKT
KWWQSENGVHEVSIRLDLETLFQFSHLVLTFKSFRPAAMLVERSKDFGQNWKVIRYFAED
CSLWFPSVSKQPADSIDDVVCDSRYSGSDPSTNGEVVLKALDPIFELGNPYATNIQDLIT
VTNIRVNFTGLFTLGDTLLGRRRRNPQDKYYYALYNMVVRGHCFCHGHASRCTPVDGGRG
DVFTHTAMIHGRCVCQHNTAGENCERCQDFHHDSPWRPGGENPANTCRRCNCNGHSDSCH
FDASRLEATGGLSGGVCEDCRHDRMGSQCESCGPFLYQDPHRATDDPQACIPCDCDPVGS
EGGGLCDALSGRCVCKENVEGRRCDQCRLGFFGLREDNPAGCQVCRCHVLGSLGSCDKLT
GNCECDHLASGPQCDQCPAGFWGLGTSGFRCSPCDCDAGGAHSNMCSPQDGHCHCLPNMG
GQRCSEPAPGFFLPPLDYFLYEAELAAPLHSGSSSFPTTTPSPPSPSHLVDPVVLPQCEK
YYREQGYDIKYTNGRLVLVRRTRRLAARRRRQQQNSLPLDPGHALQIIPRQRNDYQPLTW
TGLGLVRVLAGAGLRFTVDNIPSSLDYQLVINYESESPSDWLASVSVVKASPGDGGCRRD
PTGSKSLPLLGRSRRGVLDSPVCLTRGSRYFVDVVFNKHSGSDGFGAHILVDSMGLIPSI
EAVQDFCSQRDVDSFRQSHCIGLSVELQPEELLPKVCEGITKSLSARIHNGALLCRCNTD
GSLGPSCSEVGGFCDCKPNVIGRCCDTCAPLTFDFGPDGCKPCECDPRGSLSELCEPIRG
QCVCRSELTGRRCDRCQPAFWDFPSCRPCECNKLSDVCDEQTGECLHCREHATGDMCERC
VEGYYGNPVSGQPCQPCLCPEVPNSGQFFATSCKQDPQSLALICKCREGHTGPRCDRCSP
GFYGDLGLPGNSCKQCPCNNNINPGDRDACNSLTGECQRCLYNTMGPRCQDCKPGYYGDA
MDQACKECSCDRRGTVVTECPLGSPCFCNSKTGQCPCRTGVLGILCDECADGYWNLQGAS
GCQACSCDFVHSFSNICDKVTGQCPCRPEFGGRQCDECGENHFGNPDVQCISCDCNIEGT
EHPSCDPETGECICRVGVSGIFCDECTPGYVSEFPACNECHPCTALWAEDVTDVQRAAVR
MRTFLPHNGYGNMFPGDSRHLRQMLKMHSMLESLAELKGVSPPKLEKLEKLCAKMGKLQN
SIDPNMILIDPSPLLNTEINNIRLEFKNLVTRVKVKHVENSDNEDEYPEERVDEIQKLHE
IQRLHEAFILDEKRVRNGNKAIEDSMDTRHQVKHDLSMCSSKGNMMSVEKKVQQLSMVNL
NKIICGGPGVEGCSGCSEALCGENKCGGPNCEGVLPISQKALSTAERTKERFITLPSSME
LFKNKINDGQRQAKDTKDQGKNLQDQIKKNMDSLKSEKNKTKGLIQRVKDYLIDDMVPAE
DIGKMAQAVLDIQLPKLPVINHINNLLSNATTSPKNLDDHAKDAQTLVHKAQEVREWTRN
IDVTEISRDIYKAEEAQSKANNNLDTGSQDKDVAKDQIKDIKNKLYDIEAKLMSPQPESL
KDKIDALTRKTEHNRNTTRRAQAAADSALNQTTDTEPELANVIWLFKLLKEKTANQTAAE
RLTKMMEEAEELKEQVEEKLLQLFDMEEKIQQLIQNKEGKESEVAMLLQMVDSLQQEIAK
RAKGYSICIS
NT seq 5433 nt   +upstreamnt  +downstreamnt
atgagacagtccatcagtgagtccagcagagtctatcaaacatctctacacaacatgatc
ttcctcttcatcattatctttcttccaggagttcgacagcaggagtcccagaaggacccg
tgcctcagcggctcatgtaatccacagctcggtgacttaatggtgggtcgatccactcag
ctgtcggcctcttccacctgtggtctggatgaaccacagaactactgcatcattggatac
ctggaggaggagcagaaatgttttacatgtgactctcgtctgccatacgatcgctatggc
aacactcacagccaccgcattgagaatgtcatcacaacctttgaccctgaaagaaaaaca
aagtggtggcagtctgagaacggagtacatgaggtcagcatccggctggatctggagact
ttgttccagttcagtcatctggtcctcaccttcaagagtttccgtccggcggccatgttg
gtggagcgatcaaaagattttggacagaactggaaggttattcgttactttgcagaagat
tgttcgctgtggttcccttctgtttccaagcagccagccgatagcatcgatgacgttgtt
tgtgacagcagatactctggatcagatccgtccaccaacggagaggtggtgctgaaagct
ctcgatcctatctttgaattaggaaacccatacgcaacaaatatccaagatctaatcacg
gtgacaaatatccgggttaacttcactggtctcttcacgttgggcgacactctgctgggt
cgaagacgcagaaaccctcaggacaaatattactacgctctttacaacatggtggtcaga
ggccactgcttctgtcacggacatgccagccggtgcacgcctgtggacggaggacgagga
gacgtcttcacacacaccgccatgattcacggcagatgtgtttgtcagcataacacagca
ggagagaactgtgagagatgtcaggactttcaccacgactccccctggaggcctggaggg
gaaaaccctgccaacacctgcaggagatgcaactgtaatggtcactcggactcttgtcac
ttcgatgcttctcgccttgaagcgacaggcgggctgagcggcggtgtgtgtgaggactgc
cgccatgacaggatgggttctcagtgtgagagctgtgggccatttctctatcaggatcct
cacagggcaacagacgacccgcaagcttgcataccttgtgactgcgacccagtgggttcg
gagggaggtggtttgtgtgacgctctgagcggccgatgtgtctgtaaagaaaacgtggag
ggtcgccgctgcgatcaatgcagactcggcttcttcggtttgagagaggacaaccccgcc
ggctgtcaggtgtgcaggtgccatgttttgggaagtcttggctcatgtgataagctgaca
ggaaattgtgaatgtgaccatttggccagtggccctcagtgtgatcaatgtccggctggt
ttctggggtttagggacctcggggttcagatgttcaccttgtgactgtgatgctggaggc
gctcacagcaacatgtgttctccacaggatggacattgtcactgtttacccaacatgggg
gggcagcgctgctctgaacctgcccccggcttcttcttacctccactggactacttcttg
tatgaggcagagctcgctgcaccgctgcatagtggaagctcttcttttcctactactact
ccttcaccaccgtcaccatctcatctagttgatcctgttgttctacctcagtgtgagaag
tattacagagagcagggttacgacattaagtacactaacgggagactcgttctggttcgg
aggacgcggcggctcgccgcccgccgaagacgccaacagcagaacagccttcctctggac
ccgggtcatgccctgcagatcattccacgtcagaggaatgattatcaacctctcacttgg
accgggttgggattggtcagagtgttggctggggcggggcttaggttcactgtggacaac
atcccatcatctctggattaccagctggtaattaattacgagtcagagtctccgtccgat
tggcttgcttcagtcagcgtcgtcaaggcgtcaccgggcgacggcggctgcagacgtgac
ccaacaggaagtaaaagtctgcctcttcttggaagatccagacgaggtgttctcgactct
ccagtgtgtctaaccagaggcagtcggtactttgtggacgtggtctttaacaaacattct
ggatcagatgggttcggcgcacacatactggttgactcgatgggtctgattccgagcatc
gaggctgttcaagatttctgctcacagagagacgttgactccttccgccaatctcactgc
atcggattgtctgttgagctccaaccggaggagttgctgccaaaagtctgtgagggaatc
acaaagagcctttcagcacggatacacaatggagctcttctttgcagatgtaacacggat
ggctcactcgggccgtcctgcagtgaagtgggagggttctgtgattgtaaacccaacgtg
attggccgttgctgtgatacctgtgcaccattgacgtttgattttggacctgatggttgc
aaaccatgtgagtgtgacccccggggatcgctgtcagagctttgcgagccgatcagaggt
caatgtgtgtgtcgctcagagttgacgggtcgacgttgtgatcgctgccagccggccttc
tgggatttcccttcctgtcgaccgtgtgaatgtaacaagctgtcagatgtgtgtgatgaa
cagactggagagtgccttcactgtagggagcacgccacaggggatatgtgtgaaaggtgt
gtcgagggttactatggtaacccggtctccggacagccctgtcagccctgcctgtgtcca
gaagttccaaacagtggacaattctttgctacttcatgcaaacaagacccacaatccctc
gctctcatctgtaaatgcagggagggacacacaggcccacgctgtgacagatgcagcccc
ggtttctatggcgatctgggtttgccaggtaacagttgtaagcagtgtccctgcaacaac
aacatcaacccgggggaccgcgatgcatgcaacagcctgactggagaatgtcagcgctgc
ctctacaacacgatgggaccacgctgccaagactgcaaacctggttactacggcgacgcc
atggaccaagcatgcaaagagtgctcttgtgaccggcggggaacggtggtgactgagtgt
cctctcggaagtccttgtttctgtaactcaaagacgggacagtgtccctgcaggacagga
gtgcttggcatcctttgtgacgagtgtgcagatggatactggaacctgcagggagcatca
gggtgtcaggcctgcagctgtgactttgttcactccttctccaacatctgcgacaaggtg
acgggacagtgtccatgtcgtcctgagttcggaggaaggcagtgtgatgaatgtggagaa
aatcattttgggaatccagacgtgcagtgcatctcttgtgactgtaacattgagggaact
gagcatccatcatgtgaccctgagactggtgagtgcatctgtcgggtcggagtctccggt
atcttctgtgatgagtgcaccccaggatacgtctcagagttcccggcatgcaacgagtgc
cacccctgcaccgctctatgggctgaagacgtgaccgatgtgcagcgagctgccgtgagg
atgagaacgttcctgcctcacaatggctatggcaacatgtttcccggcgacagtcggcat
ctacgacaaatgctgaagatgcactccatgttggaaagccttgccgaactgaagggagtc
tctcctccaaagctggagaagctggagaaactatgtgcaaaaatggggaagctgcaaaac
agcatagacccaaatatgatccttattgacccgtcccctctcctcaacactgaaatcaac
aacattcgtctggagttcaagaacctggtgaccagagtaaaagtgaaacacgtcgagaac
tcggacaatgaagatgaatacccagaagagcgggtggatgaaatccagaagcttcatgaa
atccagaggcttcatgaagcctttatattggatgagaaaagagtgagaaacggcaataaa
gccatcgaggactcaatggacaccaggcatcaagttaaacatgacttgagcatgtgcagc
agcaaaggaaacatgatgtcggtggaaaagaaggtccaacagctaagcatggtcaatctc
aacaaaatcatctgtggaggaccaggtgtggagggctgttctggatgtagtgaagctctg
tgtggagaaaataaatgtggaggtccaaactgtgaaggggtccttccaatcagtcaaaaa
gctttaagtacagcagagagaacaaaggagcgtttcatcaccctcccatccagtatggag
ttgttcaaaaacaagatcaatgatggccaacgacaagctaaggacaccaaagaccagggc
aaaaacctccaggaccagatcaagaaaaacatggactctctcaagagtgagaaaaataaa
accaaagggctcatccagcgagtcaaagactacctaatagatgacatggttcctgctgag
gatattggaaaaatggcccaggctgttctggacattcagctgccaaaattaccagtgatc
aatcacatcaataatctgctgtccaacgcgaccacttccccaaagaacctggacgatcac
gccaaggatgcccagactctcgtgcacaaagctcaggaagtcagggagtggacaagaaac
attgatgtgacagagatcagcagagatatttataaagcagaggaagctcagtccaaagcc
aacaacaacctggacacaggcagccaagacaaagacgtggcaaaagaccaaatcaaagac
attaaaaacaaactatatgacatcgaagcaaagctgatgagtcctcaacctgaaagtttg
aaggacaagatcgatgcactgacgaggaaaactgaacacaacagaaacacaaccagaagg
gcccaagcggctgcagactctgctttaaaccagacaactgacacagaaccagagcttgct
aatgtgatatggctgtttaagcttctaaaggagaagacagccaatcagacggctgcagaa
cgactgacaaagatgatggaagaggccgaggaattaaaggaacaggtggaggaaaaactc
ctccagctattcgatatggaggagaagatccagcagctgatccagaataaagaaggcaaa
gaatctgaagtcgccatgttgttacaaatggtggattcacttcaacaggagatcgctaaa
cgagctaagggatactccatttgtatctcataa

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