Gasterosteus aculeatus (three-spined stickleback): 120809737
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Entry
120809737 CDS
T07457
Name
(RefSeq) LOW QUALITY PROTEIN: cartilage intermediate layer protein 1
KO
K24436
cartilage intermediate layer protein
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gat04990
]
120809737
Domain-containing proteins not elsewhere classified [BR:
gat04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
120809737
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CILP_C
CILP_8th
CILP
CILP_5th
Mucin2_WxxW
Ig_3
TSP_1
Ig_2
I-set
CarboxypepD_reg
CarbopepD_reg_2
V-set
ig
TSP1_CFP_C
Ig_4
Motif
Other DBs
NCBI-GeneID:
120809737
NCBI-ProteinID:
XP_040019703
LinkDB
All DBs
Position
II:9399844..9406110
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AA seq
1159 aa
AA seq
DB search
MSVRPFLLLTVGITTAMVVTAQESWRSHTRDSSLHHSDDNYEWTTWFNVDHPGGRGDYEQ
LEAIRFYYRARVCETPRAIEARTTDWVPARKTGETVHADPTVGFWCLNEEQGPERNCSNY
AVRFLCPKDNSENLLDNWGPWSDWNACSALCGQSGVQVRSRNCQSRSAPCSGPKAEEVAC
SGPKCPKTDCSLQCVMGKVNAECDACMCEEHILLGSVRGAGGLTAEGATILRSGKLLTLT
DHNGHFRIPGICPDGNTTLSVQLQGHSTLSAVVPHSGERTSVLSVRLKRTEKLHLLGSPE
SKVRREGHTAAFCCKVSGTPQPDTYQWFHNNSLLEKQSEGTMVLKNLRLDQTGEYYCKAS
GPSGAIKTKPATLKVLGRDEHSCNPSPESHLIRLPHDCHQNSTDSFYYDVGKCPSTICAG
QLDNGIRCKDKMAYCCGVKKMEKRQLTCQGYQLPTMVVTECGCQKCVDTRAIVHGRAVAA
DNGEPMRFGHVLMNGVRISRTGYKGTFSIQVPPDTLRLVLTFVDNMQKFVNTTKVLPFNT
KGGAVYHEIKLLRKKRPVTISPTEVNTLELGEVEGQEAMIQIQIPPYAFYTEKGEVFTGN
VNASVTFLDPRDVSTAAAAQSDLNFVGDEGDTLPLRTYGMFSVDFRGEENNEPLNAGEVK
VFLDSAQVKMSEHLDTMKLWSLNPDTGLWEEEGSLQVEKKRRGKREERTFLIGNMEIRER
RLFNLDVPENRRCYVKVRTFRSERFMPSEQVEGVVVSLINMEPTAGYSSNPRAWGRFDSV
VTGSNGACLPAFCDEQKADAYSAYVMANLGGEELEAVASAPKLNPNLIGVPQPRLGKLNY
RRTDHEDPKVKATAFSINVAKPSSNTAEEGSGPVYTFENLKECEEASFSAAHFRFSRVEG
DRYDYNTVPFNEDNPMSWTEDYLTWWPKPMEYRACYVKVKINSPHEINVRSRNMGGTHPK
TVGQLYGLRDTRSIRDMDRPTVSAVCLEFKCSGMLYDQERVDRTLVKVIPQGSCKREQVN
TILQEYLVNHLPLAVNNDTNEFTMLAPLDPLGHNYGIYTVTDQDPRTAKEIALGRCFDGS
SDGTSRVMKSNEGVALTFTCGDREVKSQSPFQASSQRQTVTSAARGEGRQNRRRQRANAP
RSSGRSTRNPTGRRTKDRS
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtgaggccctttcttcttctcactgtgggaatcaccacagccatggttgttacc
gctcaagagtcatggagaagccacaccagagattcatccctacaccactctgacgacaac
tatgagtggaccacgtggttcaatgtcgatcaccccggaggccgcggagactatgagcag
ctggaggccattcgcttctattaccgggcccgagtgtgtgagactcccagggcaatcgaa
gccagaaccactgactgggtgccagcccgtaaaactggggagacggtccacgcggaccca
accgtgggcttctggtgcctcaacgaggagcagggtcctgaacgcaactgttccaactac
gcagtccgtttcctctgtcccaaagataacagtgagaatctcctggataactggggtccg
tggtcagactggaacgcatgctctgcgctctgcggtcagtcgggggtccaagtgcgctcc
agaaactgccagtcacgctctgcgccttgcagtggacctaaagcggaagaggtagcatgc
agtggacccaagtgccccaaaacagattgttccctgcagtgtgtgatggggaaggtaaat
gccgagtgtgacgcatgcatgtgtgaggaacacatccttctgggttctgttcgtggtgca
gggggtctcactgctgaaggtgctactatccttcgctctggcaagctccttacccttacc
gaccacaatgggcatttccgcatccccggtatctgccctgacggcaacactaccctgtcg
gtccagctgcagggccactccaccctgagtgctgttgtgccccacagtggtgaacgcacc
tctgtcctcagtgtccggctgaaaagaacagagaagcttcatttgttgggcagccctgag
agcaaagtcaggagggaaggacacaccgcggccttctgctgcaaagtgtcaggaacacca
caaccagacacgtaccaatggtttcataacaacagcctcctggagaagcagtctgagggc
accatggtcctgaaaaacctgcgccttgaccagactggagagtactattgcaaagcaagt
gggccgtcaggtgctattaagaccaaaccagcgacactcaaagttttaggtagagacgag
cattcatgtaaccccagccctgaatcccacctcatccgtcttccacatgactgtcaccaa
aacagcacagactccttttactacgatgtgggcaagtgcccctcaactatatgtgctgga
cagctggacaatggcatcaggtgcaaagacaaaatggcatactgctgtggtgtcaaaaag
atggagaagaggcaactaacatgccagggctaccaactgcccaccatggtggtgactgag
tgcggctgccagaaatgtgtggacaccagggccatcgtgcacggtagggcagtggctgca
gacaacggtgagccaatgaggtttggccacgtcttaatgaacggagtccgaatcagccga
accggctacaaaggtaccttctccatccaggttcctccagacacattgaggctggtcctg
acttttgtggataacatgcagaaatttgtcaacaccacaaaggtacttccatttaacacc
aaaggaggggctgtttaccacgagatcaaacttttgagaaagaaacgtcctgtgaccatc
agcccaacagaagtcaacactctggagctcggggaggtagagggccaggaggcaatgatt
caaatacagattccaccctatgccttctatacagaaaaaggagaagtcttcactggtaat
gtaaatgccagcgtgacgttcctagaccccagagacgtctccacagcagcggcagcgcaa
agtgatctcaactttgtaggcgacgaaggagataccttgcccctgagaacttatgggatg
ttctcagtggactttaggggtgaagaaaacaacgagccgctgaacgcaggtgaagtgaag
gtgttcctagattctgcccaggtaaagatgtcggagcacctcgatactatgaagctgtgg
tcgctgaaccccgatactggcttgtgggaggaggaaggaagtctgcaggttgagaagaaa
aggagaggaaagagggaggagagaacctttctgattggcaacatggagatcagagagagg
cgcctttttaatctggacgtcccggaaaaccgaaggtgttacgtgaaagtcagaaccttc
cgcagtgaacgcttcatgcccagtgagcaggtggagggagttgtggtaagtcttataaac
atggagcccacagctggctactcttctaacccgcgtgcctggggccgtttcgatagcgtc
gtaactggctccaatggggcctgtcttcctgctttttgcgatgaacaaaaagctgatgcc
tactcggcgtatgtcatggccaaccttggaggagaggagctggaggccgtcgcttctgct
cccaaactcaatcccaacctaattggagtgccccagcctcgcctgggcaagctgaactac
aggcggacggatcatgaagaccctaaagtgaaggcgactgcattcagcatcaacgtggca
aaaccgagttccaacacagcggaagaaggcagcggaccagtgtacacatttgaaaacttg
aaggaatgtgaggaggcgtcattcagcgcagcacacttccgcttctcaagagtggaagga
gatcgctacgattacaacacagtgccgttcaatgaagacaaccccatgagctggacagag
gactacctgacctggtggccaaagcccatggaataccgggcctgctacgtcaaagtcaaa
atcaacagcccgcatgagatcaatgtgcggtcccgtaacatgggcggcacccacccaaag
acggtgggccagctgtacggcctccgagatacacgaagcatccgcgacatggaccggcca
acggtttcagcagtgtgcctggagttcaagtgtagcggtatgttgtacgatcaggaacgt
gtggatcgcaccctggtgaaggtgattccgcagggaagctgtaaaagagaacaggtcaac
acaatacttcaggagtacctggtcaaccacctgcccctcgccgtcaacaatgacaccaac
gagttcaccatgctcgcacctctcgaccccctgggccacaactacggaatttacacagtg
acggaccaggatccgcgcacggccaaagagatcgccctgggacgctgtttcgacggcagt
tccgatggtacatctcgcgtgatgaaaagcaacgagggcgtagcgttgacgttcacctgt
ggagaccgtgaggtgaaaagccagagtcccttccaggcgagttctcagcgtcaaactgtg
accagcgcggcgagaggagaaggcaggcagaaccggcgccgacagagggccaacgcgcca
cgcagcagtgggcgtagcacaagaaatccaacgggacggcgcacaaaggacagaagctaa
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