Gasterosteus aculeatus (three-spined stickleback): 120809753
Help
Entry
120809753 CDS
T07457
Symbol
irx5b
Name
(RefSeq) iroquois-class homeodomain protein IRX-5b
KO
K24889
iroquois-class homeodomain protein IRX
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gat03000
]
120809753 (irx5b)
Transcription factors [BR:
gat03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
120809753 (irx5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
120809753
NCBI-ProteinID:
XP_040019722
LinkDB
All DBs
Position
XIX:15511199..15516016
Genome browser
AA seq
377 aa
AA seq
DB search
MSFRGFIFPPSVSLSLSPPFGTRVLLGPRPEELGRSSSGSAFAPYSGSGSSPGFSSHLPY
GSSFVSPGYNPSSGVSGSLDYHPSTTLGALGPYAYGEPSYRKNATRDATATLKAWLNEHR
KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPRNRSEDEEEEDHVEL
ERNDEDKETVKVSEEPETGSQAASLGTPCVLLYREDSGSSSDTDRSFTDPDFKNSGNQRL
ALVPGPASTAHPPQTSPTGSFVGPQQEHKEPVDLIRGSNPKPKLWSLAEIATSSDKQKRP
SDTSQTQFPHSPVLARNLYTTSSFLPRYPGFGSLGAPQGGSHLNGLHHTMLQRAEAAARA
SIVQNHNLLDLHELNRS
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttcggggtttcattttcccgccgtccgtgtctctttctctgagcccgcccttc
ggtaccagagttctgttgggaccaaggccggaagagctgggtcggtcctcttcgggatca
gccttcgctccgtactccggatccgggtcctctcccggtttcagctcgcacctcccgtac
ggcagctcctttgtgagtcccggttacaatccgtcctcgggggtctcgggctctttggac
taccacccgtccaccacccttggggccctggggccctacgcctacggagaaccctcttac
cggaagaatgccacgcgggatgccacagcgacgctgaaggcctggctcaatgagcaccgg
aagaacccctaccccaccaagggggagaagatcatgctggccatcatcaccaagatgacg
ctcactcaggtctccacctggttcgctaacgcacgccggaggctgaagaaggagaacaag
atgacctggaccccccggaataggagcgaggacgaggaggaagaggaccacgtcgagctg
gagaggaacgacgaagacaaggagaccgtcaaggtcagcgaggagcccgagactgggagc
caggccgcctctctggggaccccctgcgttttgctgtatcgtgaggacagcggaagcagc
agtgacacggaccgaagcttcaccgatccagacttcaagaactcggggaaccagaggctg
gccctcgtcccgggccccgcttctacagctcaccccccccagacatcacctacagggtca
tttgtagggccacagcaggagcataaagaacccgtagacttgattcggggatcaaaccct
aaacccaaactctggtctctggctgagatcgccacctcttccgataagcaaaaaagaccc
agtgacacatctcagacccagttcccacacagccccgtcctggcccgaaatctctacacc
acctcctccttcctccctaggtaccccggctttggctccctgggggccccccagggcggc
tcacacctgaatggattacaccacacgatgctgcagagggccgaggccgcggccagagcc
tcaatagtccagaaccataacctgctggacctgcatgagctgaacagaagctga
DBGET
integrated database retrieval system
