Gasterosteus aculeatus (three-spined stickleback): 120809940
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Entry
120809940 CDS
T07457
Symbol
taf2
Name
(RefSeq) transcription initiation factor TFIID subunit 2
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120809940 (taf2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gat01002
]
120809940 (taf2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gat03021
]
120809940 (taf2)
03036 Chromosome and associated proteins [BR:
gat03036
]
120809940 (taf2)
Peptidases and inhibitors [BR:
gat01002
]
Metallo peptidases
Family M1
120809940 (taf2)
Transcription machinery [BR:
gat03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
120809940 (taf2)
Coactivators
SAGA/TFTC/STAGA complex
120809940 (taf2)
Chromosome and associated proteins [BR:
gat03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
120809940 (taf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_2
Peptidase_M1
Peptidase_M1_N
IL2
Motif
Other DBs
NCBI-GeneID:
120809940
NCBI-ProteinID:
XP_040020012
UniProt:
A0AAQ4PXY5
LinkDB
All DBs
Position
XX:complement(17091801..17109111)
Genome browser
AA seq
1223 aa
AA seq
DB search
MNRKKDKGFESPRPFKLTHQVVCINNINFQRKSVIGFVELTIFPTVVNLNRIKLNSKQCR
IYRVRVNELEAPFIYNDPTLEVCHHESKQRNLNYFSSAYTAAVSAVDPDAGHGELVIKVP
SELWKQGDDLKVLKVYIEFSLDQPKGGLHFVVPDVEGSMAERGAHVFSFGYQNSTRFWFP
CVDSYSELCTWKLEFTVDASMVAVSCGDLVETIYTHDMRKKTFHYVLPIPTAAPNISLAV
GPFEILVDPYMHEVTHFCLPQLLPLLKHSMSYLHEIFEFYEEILTCRYPYACFKTVFVDE
AYVQVSSYASMSIFSTNLLHSAMIIDQTPLTRRCLAQALAQQFFGCFISRMSWADEWVLK
GISGYIYGLYLKKTFGVNEYRHWIKEELDKIVEYELKMGGVLLHPTFSGGKEKDNPTPHL
HFSIKHPHTLSWEYYKMFQCKAHLVMRLIENRISMEFMLQVFNKLLSLASTASSQKYQSH
MWSQMLLSTHAFLKSISNVSGKDIGPLIKQWVDQSAVVKFFGSFAFNRKRNVLELEIRQD
YTSSGTQKYVGPIKVTVQELDGSFNHTLQIEENSLKHDIPCHSKSRRNKKKKIPLMNGEE
VDMDLSAMDADSPLLWIRIDPDMSILRKVEFEQADFMWQYQLRYERDVVAQEESISALEK
FPTAASRLALTDILEQEQCFYKVRMQACFCLAKIANAMVSTWQGPPAMKSLFTRMFCCKS
CPNIVKTNHFLSFQSYFLQKTMPVAMALLRDVQNLCPKDVLNFILDLIKYNDNRKNKFSD
NYYRAELIEALTNSLTPAISITNEVRTVDNLNADVRLILEEITRFLNMEKLLPSFRNTIT
VSCLSAIRQLQKNGHIPSDASLFKSYAKYGHFVDVRVAALEALVDYTRVERSSVDLQWLL
EMAQNDPAHYVRHKILGMLCKNPPFTKTTDPAPPFTKTTDSALCNEALVDQLWKLMNSGT
SHDWRLRCDAVNLYYALFGLTRPSCLPLPELGLVLNLKEKKAVLNPTIKPELGVGPVMDT
PASIGIHGVGMSYSAVDEEPDPISLGVCGVGQPPLSLKRKAETPLGSPPEPGQILQQQED
DARGGRFKIRFNTMEDEDIDMETVHDSQAFIHHHLNLLERPSTPGKEPPSVEQSMLSMPA
TPVPSFPKETTPLSSKHGGEHGHHHHHHHHEHKKKKKKHKHKHKHKHKHESKDKEKDRER
DNSQAYSNSPASGRSLRSPSLSD
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggaagaaggataagggatttgagagccctcgcccctttaaattgacccaccag
gtggtgtgcatcaacaacatcaacttccagaggaagtctgtcattggctttgttgagctg
accatcttccccacagtggtcaacctgaacaggatcaagcttaacagtaaacagtgccgc
atctacagggtccgagtcaatgaactcgaagccccattcatttacaacgaccccaccctg
gaggtgtgccaccacgagtccaagcagaggaatctcaactatttctccagcgcctacaca
gcagcagtgagtgctgtagaccccgatgcaggacacggggagctggtcatcaaagttcct
tctgaactctggaaacaaggagatgatttgaaagtcttaaaggtgtacatagagttttcc
ctggaccagccgaaaggaggtctccacttcgttgtgcctgatgtggaaggcagcatggca
gagagaggcgctcatgtgttctcctttggataccagaactccaccagattctggttcccg
tgtgtggactcctactcagagctgtgcacgtggaagctggagttcaccgtggatgcttca
atggtggctgtgtcgtgtggagacctggtcgagactatctacacccatgacatgaggaag
aagactttccactatgtcctccccatccctaccgcggcccccaacatctccctggcagtg
gggccctttgaaatcctggttgatccctacatgcatgaggtgacacacttctgcctgcca
cagctgctgccactgctcaaacactccatgtcgtacctgcatgagatctttgagttctac
gaggagattctgacatgccgctacccttacgcctgcttcaagacggtgtttgtggacgag
gcctatgtgcaagtgtcctcctatgcttccatgagcatctttagtaccaacctgctccac
agcgctatgatcatagaccagaccccgctgacccgccgctgtctggcccaagctttggcc
cagcagttctttggctgtttcatctccaggatgtcatgggccgatgagtgggtgttgaaa
ggaatctccggatacatctacggcctgtacctgaagaagacctttggagtcaatgagtac
cgccactggatcaaagaggagttggacaagattgtggaatatgaactaaagatgggagga
gttctgttgcacccgaccttcagtggaggcaaagagaaggacaacccaactccccacctt
cacttctccatcaagcaccctcacactttgtcctgggagtactacaagatgttccagtgt
aaggcccacctggtgatgaggctgatagagaacaggatcagcatggagttcatgttgcag
gttttcaacaagcttctcagcctggccagcacggcctcgtcccagaagtaccagagtcac
atgtggagccagatgcttctctctactcacgcctttcttaaatccatctccaatgtctca
ggcaaagacatcggccctctgatcaaacaatgggtagatcaaagcgctgtggtgaagttc
tttggcagctttgccttcaataggaagaggaacgtgttggagctggagatccgacaggac
tacacgtcatctgggactcagaaatatgtgggtcccatcaaagtgacggtgcaggagctg
gatggatccttcaaccacacgttgcagatcgaggagaacagtctgaaacacgacatcccc
tgtcactccaagagcagacgaaacaagaaaaagaagatccctctgatgaacggagaggaa
gtcgacatggatttatctgccatggatgcggactctcccctcctgtggatccgcatcgac
ccagacatgtccattctgaggaaggtggagtttgagcaggctgacttcatgtggcagtat
cagcttcgctacgagagggatgtagttgcacaggaggagtccatctcagcattggaaaag
tttcccaccgcggcctccaggctcgctctgacggacatcctagagcaggaacagtgtttc
tacaaagtccgcatgcaggcctgcttctgtttggccaagatagccaatgccatggtgagc
acgtggcagggtccgccagcgatgaagtccctgtttactcgaatgttttgctgtaagagc
tgcccgaacatcgtgaagaccaaccacttcctgagcttccaaagctacttcctgcaaaag
acgatgcctgttgccatggcgctgctaagagacgtgcagaacctttgtcccaaagacgtc
ctcaacttcatccttgatctcatcaagtataacgacaacaggaaaaacaaattttcagat
aactactaccgtgcagagctgatcgaagctctgaccaactctctgaccccggccatcagc
atcaccaacgaggtgcgcaccgtggacaatttgaacgctgacgtccgtctcatcctggag
gagatcacgcgcttcctcaacatggagaaactgctgccgagcttcagaaacaccatcact
gtcagttgtctgagcgcaatccgccagcttcagaagaacggtcacattcccagtgacgcg
tcactcttcaagtcctacgccaagtacggacactttgtagacgttcgcgtcgccgcactg
gaggccctggtggactataccagagttgaaagaagctcagtggatctgcagtggctgctt
gaaatggcccagaatgacccagctcattatgtcagacataagatcctgggtatgctctgt
aagaatccacctttcaccaagacgaccgacccggctccacctttcaccaagacaaccgac
tcggctctgtgtaatgaagctctggtcgaccagctctggaaacttatgaactcagggacc
tcccacgactggcggctgcgctgtgacgccgtgaacctctactacgccttgtttggattg
acccgaccctcatgcctccccctgcccgagctgggcctcgtgctcaacctgaaggagaag
aaagctgtgctgaaccccaccatcaagcccgagctgggggtcggtcccgtcatggacacg
cccgccagcataggcatccatggcgtgggcatgagctactctgctgtggatgaagagcca
gatcccatctcactgggggtgtgtggggtggggcagccccctctgagcctgaagaggaag
gctgagacccctctgggctcccctcccgagccggggcagatactgcagcaacaggaagat
gatgcgcgaggagggcgcttcaagatcaggttcaacacaatggaagatgaagatattgat
atggagacggttcatgacagtcaggccttcattcaccatcacctgaatttgttagagagg
ccctccacgccaggtaaagagcctccgtcagtcgaacagtccatgctgtccatgcccgcc
acgcccgtgccgtccttcccgaaggagaccacgcccctgtcctccaaacacggcggcgag
cacgggcaccaccaccaccaccaccaccacgagcacaagaagaagaaaaagaagcacaag
cacaaacacaagcacaagcacaagcacgagagcaaagacaaggagaaggaccgagagagg
gacaactcccaagcctacagcaacagcccggccagcggcaggtcgctgcgctcgccgtct
ctgtccgactaa
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