Gasterosteus aculeatus (three-spined stickleback): 120809963
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Entry
120809963 CDS
T07457
Symbol
si:dkey-33i11.1
Name
(RefSeq) sialoadhesin isoform X1
KO
K06467
CD22 antigen
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
120809963 (si:dkey-33i11.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gat04515
]
120809963 (si:dkey-33i11.1)
04090 CD molecules [BR:
gat04090
]
120809963 (si:dkey-33i11.1)
04091 Lectins [BR:
gat04091
]
120809963 (si:dkey-33i11.1)
Cell adhesion molecules [BR:
gat04515
]
Immunoglobulin superfamily
SIGLEC family
120809963 (si:dkey-33i11.1)
CD molecules [BR:
gat04090
]
Proteins
120809963 (si:dkey-33i11.1)
Lectins [BR:
gat04091
]
I-type lectins (Siglecs)
120809963 (si:dkey-33i11.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_2
Ig_3
ig
V-set
I-set
Ig_CD22
Izumo-Ig
Ig_VWDE
Motif
Other DBs
NCBI-GeneID:
120809963
NCBI-ProteinID:
XP_040020063
LinkDB
All DBs
Position
20:14374661..14381515
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AA seq
675 aa
AA seq
DB search
MVFFPKNCFAHLAVLFSFSGVVAVLVSAEMLAGALVLCIILTALPGIQSGWSVSFSRSDI
CVWAGTTVTLPCRYDYPSGHTVKRVMWFRVSAEGRREFAHHTDPNEVSLSYRGRTRYIGG
SYSSCSVQIRIVELSDAGQYHFRFETDQPLGRWTSPNAIALDVTDLQVQVHPVRPANMFG
LGETVFVGCQARGCAAPGRSLALYRNGLNLGSHEKWMIINRFDQQHAGAYTCRPIPPQNV
QSPALSLALGHGPSSTSIGVFPVADVSEGGSVTLTCSSDAAPPVESFAWFKDMESGSIPD
SFRPQLQLSPLRYTDRGEYFCVARNPLGTDRSKPLLLNVTYSPKNTRVLLTPPADIREGF
YVNMSCVSQAHPAASRYAWYRILGDQVLATGTFQNLTFPSVRAHHAGQYYCKAWNRLGYQ
TSPVATLTILYPPKNTSVLARPSGVVDAGRPLTLTCSSQANPAVDNFTWHRLALDGGSVQ
SWGSRSGPVFTFSEVGPRESGQYYCEARNRIGAHSSPVLTVRVRGRLKVIALASAVGVSA
GLITLTVAIMISKNMHRVDMESGEVANKHPPVTADTRFYESTQQTFPVKRGKMSDIPEEP
EDLSDSGHPAIVPLKDAPPITEVESHSPALNYITVHYSKLSSVDQVQVHNLPLGADKKQK
DSSKVVYTLLQQPRR
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggtgttttttcctaaaaattgttttgctcacctcgctgtgcttttctccttctccggt
gtcgttgcagtgctcgtgtcagcggagatgttggcaggtgcgttagttctgtgcatcatc
cttacggcgttaccaggtattcagagcgggtggagcgtgtcattttctaggagcgatatc
tgcgtgtgggcaggaacaaccgtcactctgccctgccgctatgactacccatcaggtcac
accgtgaagcgggtcatgtggttccgtgtgtctgcagagggtcgcagggagttcgctcac
cacactgaccccaacgaggtcagcctgtcgtaccgcggacgcacccgctacattggaggc
agctactccagctgctcagtccagatccggatcgtcgagctgagcgacgcgggccagtac
cacttcaggtttgagacggaccagccgctggggagatggacgtccccgaacgccatcgct
ctcgatgtaacagacctccaggtccaggtgcacccggtcaggcccgccaacatgttcggc
ttgggagagactgtattcgtaggctgccaggccagaggatgcgctgctccagggaggagc
cttgcactgtacaggaacgggctgaacctgggctcccatgagaaatggatgatcatcaac
cgctttgaccagcagcatgctggcgcatacacctgccgaccgatcccgccacagaacgta
cagtcaccagccctctcgctggctctgggccacggtcccagctccacctccataggagtc
ttccccgtggcagatgtttcagagggggggtcagtcactcttacgtgcagtagtgacgca
gcgccgcctgtagagagctttgcatggttcaaagacatggagagtggcagcatcccggac
agtttcaggcctcagctgcagctgtcccccctcagatacacagacagaggagagtacttc
tgtgttgcacgcaacccactgggaacggaccgctcgaagccacttctactcaatgtcacg
tactctccaaagaacacgcgtgtgctgctgactcctccagctgacatccgagaaggcttc
tacgtgaacatgagctgtgtcagccaggcccaccctgctgccagcaggtatgcttggtat
cgtatcctaggtgaccaggtgctggctacaggaaccttccagaacctgacgttcccctca
gtgcgtgctcaccacgctggtcagtactactgcaaagcatggaaccggttgggataccaa
acctccccagttgctacactcactatactctaccctcctaagaacacctcagttcttgct
cgtccctccggtgtggttgatgctggccgacctttgaccttgacctgcagcagtcaggcc
aacccggcagtggacaacttcacatggcaccgcttagctctggacgggggctctgtacaa
tcgtggggcagcaggtccggtcctgtcttcaccttctccgaggtcggccctagagagagc
ggacagtactactgcgaggccaggaatcggatcggagcccacagctctccggtcctcact
gtacgagtcagaggtcgtctaaaggtcattgccttggcctcagcagtaggggtgtctgct
ggactcatcactctcacagtggccattatgatcagtaagaacatgcacagagtagacatg
gagtcaggagaagtagcaaacaagcatccgccagtgacagctgacaccaggttctatgag
tcaacccaacagacctttccagtgaagaggggcaagatgtccgacataccggaagagcca
gaggacctgagtgacagcggccaccctgccattgttcctctgaaggatgctccaccaatc
acagaagtggaatctcacagccccgccctcaactacatcactgtccactactccaagttg
tccagtgtggaccaggtgcaggtccacaacctaccactgggtgctgataagaagcagaag
gattcctccaaagttgtttacactttacttcagcagcctcgccgctga
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