Gasterosteus aculeatus (three-spined stickleback): 120810084
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Entry
120810084 CDS
T07457
Symbol
sntb1
Name
(RefSeq) beta-1-syntrophin
KO
K24064
beta-syntrophin
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120810084 (sntb1)
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GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_6
PDZ_2
PH_9
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
120810084
NCBI-ProteinID:
XP_040020280
UniProt:
G3NV28
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Position
XX:complement(11738995..11762471)
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AA seq
556 aa
AA seq
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MAVVITTGVPGVSGVQKSGFLDVLVRERWHKVLVNLNEEALTLSCEEEDCGPDRDSVTPN
GVTNGSYLDNNNANSNNGPHAARTAFTDLPERVPEAIANRKRCVKVTKQEIGGLGVSIKG
GKENKMPILISKIFKGLAADQTQALYVGDAILSVNGVNLRDATHDEAVQALKRAGKEVTL
EVKYMREATPYVKKGSPVSEIGWETPPPESPRLGSPTVLSSPTSFSFSPSDSPSSPSMPS
LSLQGDRRCIPLKMCCVTRALTTPDPENRQLELHSPDARHTVVLRCPDQPSALSWFSAMH
SVTSKLAKRALSEVIHSTARTDVAGSREIRHLGWLAGKTESEKQCWKPVLVVVTEKDLLL
YESLPRGKEAWQSPAHQYPLLATRLVHSGSERGSPHSGTELLFATRTGTRLGIETHLFRA
ETAKDLSLWTRQLVNGCHASAEMIKEVTTSCLYQSQECRLVIHYEQGFSVLADPKLGDGE
NREERGAHTPTRPQVLLSYPYEKLKMSSDDGVRMLFLDFGGEEGEIQLDLHSCPKPIVFI
LHSFLSAKIYRLGLVA
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggtaataacgacgggagttccaggtgtctccggagtacaaaaaagtggattc
cttgacgttttggtgcgggagcgttggcacaaagttttggtcaacttaaacgaggaagcg
ctcacgctgagctgcgaggaggaggactgcggtccggaccgcgacagcgtcacccccaac
ggcgtcaccaacggatcttacctggacaacaacaacgccaactccaacaacggcccccac
gccgcgcgcaccgccttcacggacctcccggagcgggtgccggaggccatcgccaaccga
aagcgctgcgtcaaggtgaccaagcaggagatcggggggctcggggtcagcatcaaaggt
gggaaggagaacaagatgcccatcctcatcagcaagatattcaagggactcgcggcggac
cagacccaggccctgtacgtcggggacgccatcctgtccgtgaacggcgtgaacctgcgg
gacgcgacccacgacgaggcggtgcaggcgctgaaacgggccgggaaggaggtgacactg
gaagtgaagtacatgcgcgaggccacgccgtacgtcaaaaaaggctccccagtgtcagag
atcggctgggaaacgccacctcccgagtctcctcgcctcggcagcccgaccgtcctctcc
tctcccacctccttctccttctccccatcggactctccgagctctccctccatgccctct
ctgtccctccagggcgacaggaggtgcataccactcaagatgtgctgtgtaacccgagcc
ttgaccacaccagaccccgagaaccgacaactggagctgcactcccctgacgccagacac
accgtggtgctgagatgcccggaccaaccgtccgccctgtcctggttctctgccatgcat
tctgtcacttccaaactggcaaagcgggcactatcagaggtcatccacagcacagccagg
acggatgtagctggcagcagagagatacggcacctgggatggctggcagggaagacggag
agtgagaagcaatgctggaagccggtgctggtggtggtgacagagaaagacctactgctg
tatgagagtctaccacgaggcaaggaggcatggcagagccccgcacaccagtatccactt
ttagcaacccgtttggtccactcagggtctgagcgggggtcgccacactctggcacagag
ctgctctttgccactcggactgggacgcgactcggcatcgagactcatctgttccgggcg
gagaccgccaaggatctgtccctgtggaccagacaactagtcaacggatgtcacgcatca
gctgagatgatcaaagaagtcacgacaagttgtctataccagagccaggagtgccggctg
gtgatccactacgaacagggcttctccgtactggctgaccccaaactgggagacggtgaa
aatcgggaggagagaggagctcacacacccaccaggcctcaggtgctcctctcctacccc
tacgaaaagctgaagatgtcctcggatgacggagttcgcatgctcttcctcgactttgga
ggggaggagggggagattcaactggacctccactcttgtccgaagccgatagtcttcatc
ctccactccttcctctctgctaagatctaccgtctgggtctggtggcctga
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