Gasterosteus aculeatus (three-spined stickleback): 120810196
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Entry
120810196 CDS
T07457
Symbol
gpc6a
Name
(RefSeq) glypican-6a isoform X1
KO
K08112
glypican 6
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
gat00535
]
120810196 (gpc6a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
gat00537
]
120810196 (gpc6a)
Proteoglycans [BR:
gat00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
120810196 (gpc6a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
gat00537
]
Others
120810196 (gpc6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glypican
DUF5856
Serglycin
Motif
Other DBs
NCBI-GeneID:
120810196
NCBI-ProteinID:
XP_040020481
UniProt:
A0AAQ4PAM6
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Position
II:complement(8335561..8432965)
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AA seq
569 aa
AA seq
DB search
MNAMWRLHAAVCTLSLLSLSSAAESKARSCGEARHAYHAKGFSLANVPHQEISGEHLRVC
PQGHTCCTSEMEDKLNQESKVEFENLVEESSRNMRTTFFSRHKKFDEFFLELLDNSEKSL
NSMFTRTYGKLYMQNSEVFQDLFTELKRYYTGGNVNLEEMLNDFWSRLLERMFQLLNSQY
QFTDDYLECVSKYTDQLKPFGDVPRRLKAQVTRAFIAARTFVQGLMVGREVANRVAKVNV
IPACVRALTKMLYCPYCRSMPGLKPCHNYCHNVMRGCLANQADLDAEWNLFIDAMLLVAE
RLEGPFNIEAVVEPVDIKISDAIMTMQDNSMQVSAKVFQGCGQPKPSGVGRSARGISDVF
SARFRPYTPEERPTTTAGTSLDRLRVVWRTMQHSLIDIKEKLKESKRFWSNLPDDICAKG
KFTEPDEDQCWNSHTKGRYFPEVVKEGLTNQVNNPEVDVDITRPDTLIRQQIMALRVMTN
KLKNAYNGNDIYFQDSSDEGSASGSGSGCSDGCTTEYVFVGTEASVIGADRGDERAAAAA
GKSCSVGPSLLLLMAAIALSLQATQTQWR
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcgatgtggaggctgcacgccgccgtatgcaccctgtcgctgctgtccctgtca
tccgccgctgagagcaaggcgcggagctgtggcgaggcgaggcacgcgtaccacgccaaa
gggttcagcctcgccaatgtgcctcatcaggaaatatcaggtgagcacctgcgtgtctgt
ccacagggacacacctgctgcacatccgagatggaggacaaactcaaccaggagagcaaa
gtggagtttgagaacttggtcgaggaaagcagccgcaatatgaggacaacatttttttca
agacataagaagtttgacgagtttttcttggagctgctggacaattctgagaagtctctc
aacagtatgttcacaaggacctacgggaagctgtacatgcagaactcagaggtgttccaa
gacctgttcaccgagctaaagcgctactacacagggggcaacgtcaacctggaggagatg
ctcaatgacttctggtccaggctgctggagcgcatgttccagttactcaactcccagtac
caattcaccgacgactacttggagtgcgtcagtaaatacacggatcagctcaagcccttt
ggagatgtgcccaggagactgaaggcccaggtcaccagggccttcatcgctgcccgcacg
tttgtccaggggctgatggtaggccgggaggtcgccaacagggtggccaaggtgaatgta
atcccggcatgcgtcagagctttgaccaagatgctgtactgcccgtactgtcgcagcatg
ccgggactgaaaccctgccacaactactgtcacaacgtcatgaggggctgcttagcgaac
caggcggacctagatgccgagtggaacctcttcatcgatgccatgttactggtggcagag
agactggagggacccttcaacattgaagcagttgtagagccagttgacatcaagatttct
gatgccatcatgaccatgcaggacaacagcatgcaggtgtcggccaaggtttttcaaggg
tgcggccagccgaagccgtcgggagtaggcaggtctgcacgcggcatctcggatgtgttc
agtgcgcgcttcagaccgtacacccctgaggagaggccaacaaccacggctggaaccagc
ctggatagattgagggttgtgtggaggacaatgcaacacagcttgattgacatcaaagag
aagttgaaagagtccaagaggttctggtccaacctgccggatgacatctgtgccaagggc
aagttcacagagcctgacgaggatcagtgctggaacagtcacacaaagggcagatatttc
cctgaagtggtgaaggaaggtctcaccaaccaggtgaacaacccagaggtggatgtggac
atcaccaggcctgacacactcatacgacagcagatcatggctctacgtgtcatgaccaac
aaactaaagaatgcttacaatggaaatgacatctacttccaggactcaagtgacgagggc
agcgcttctggcagcggcagcggctgctccgacggctgcacaacagagtatgtttttgtt
ggaacagaagcttctgtgatcggagccgatagaggcgacgaacgagcagcagcagccgca
ggcaagtcgtgttccgtcggaccctccctactgctgttgatggcggccatcgcactgtct
ctccaggcaacgcagactcaatggagataa
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