Gasterosteus aculeatus (three-spined stickleback): 120810214
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Entry
120810214 CDS
T07457
Name
(RefSeq) ribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gat03019
]
120810214
Messenger RNA biogenesis [BR:
gat03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
120810214
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_4
zf-CCCH_2
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
120810214
NCBI-ProteinID:
XP_040020511
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Position
XX:complement(1808900..1814274)
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AA seq
608 aa
AA seq
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MDPPELDLLEANSEELQLRVDLFRKLGYRSAEVKAALRKLGLSTDTNSVLGELVLSRTDA
APCATGPEPAGRKDPLLPPSWAVGPCGVNLYPGDRKNTDTELRPIVIDGSNVAMSHGNKE
VFSCRGIQLAVNFFLDRGHTAVTVFVPTWRKEQPRPDSPITDQHILLEFEKRKIVVFTPS
RRVGGKRVVCYDDRFIVKLAYDSDGVIVSNDTYRDLQGERSEWKKCIEERLLMFSFVNDK
FMPPDDPLGRHGPSLDNFLRKKPLPAEQKRQLCPYDKKCTYGMKCKFYHPERSNQAYLSL
ADELREKAQISTVKEQGNARISPRPIPSDPGPAHNAFSDAKDPNTEHTRSQHSSSHTGQF
CENARYWEDPGKSPIQMPPRVTGSLTEWPGLHSTPNQYYPNVSHEYLDSGFGSCESQYSD
YSHCVSNSLRRRPPQQSSPGGPSHAPLNGEENNTGQTCRCCSHEEPAHQRHHGGQDAKRQ
PKHDAYPPHVFPHQNHFSSHLHYGAAPHHQQQYWSDPFQVLPQARTSSPGHSSHPYSGAY
EGPQYHSWGQQQSPQAAYDPQRLELRRRLQAIFPPQQVDAVMGMFPHVMNAEKLAAEILN
RKAQRGVF
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggatcccccagagttggacctgcttgaagcgaacagcgaggagctccagctgagagtg
gacctcttcaggaaactgggttaccgctcagcagaggtgaaggccgctctcaggaagctg
ggcctgagcacagacaccaactcggtgctgggagagctggttctgagcaggaccgacgcc
gcgccgtgtgcaaccggtcccgagccggcaggccggaaggaccccctgctgcctcccagt
tgggccgttggaccgtgcggggtcaacctctatccgggcgaccggaagaacaccgacaca
gaactaagacccatcgtgattgacggcagcaacgtcgcaatgagccacggcaacaaggaa
gtgttctcgtgccgcggcatccagctggcggtgaacttctttctggacagaggtcacact
gccgttaccgtgtttgttcccacctggcgcaaagagcagcccagaccggacagccccata
acagatcaacacatcctgctggagtttgaaaaacggaaaatagtggtcttcactccgtcg
cgccgggtcggtggtaagcgagtggtctgctacgacgaccgcttcatcgtcaagttggcg
tacgattccgacggagtgatcgtatccaatgacacctaccgagacctgcaaggagaaaga
tccgagtggaagaaatgcattgaggagaggctcctcatgttctcgtttgtgaacgacaag
ttcatgcccccggatgaccccctgggtcgccatggccccagtctcgacaacttccttcgg
aaaaagccactgcctgccgagcaaaagcgacagctgtgtccttacgacaaaaagtgtact
tacggtatgaaatgcaagttctaccacccagagcggtcgaaccaggcctacctgtccctg
gctgatgaattgagagaaaaagcccagatttctactgtaaaagaacaggggaatgccaga
atatcacccagaccgattccgtctgatccaggccctgctcacaacgccttctccgatgcc
aaagaccctaacacagagcacacaagatcccagcacagttcttcacacacaggtcagttt
tgtgaaaatgcacggtactgggaggacccgggaaaaagtccaattcaaatgccgcctcga
gtaacaggaagcctgacagagtggcccggcctgcactccacgccaaatcagtactacccc
aacgtctctcacgagtacctggactctggcttcggctcttgtgagagtcagtactctgac
tattcgcactgcgtcagcaactccctgaggcgcaggcctccgcagcaaagttctcccggc
gggcccagccacgcccccctgaatggagaggaaaataacaccggccagacctgcaggtgc
tgttcccacgaagaaccagctcaccagcggcatcacggaggccaggacgccaagcgtcag
cccaaacacgacgcctaccctcctcacgtgttcccgcaccaaaaccacttttccagccac
ctccactacggcgcagccccacatcatcagcaacagtactggtccgatcccttccaggtg
ctgccccaagccaggacctcaagcccgggccattcatcacacccttacagcggcgcttac
gaaggcccacagtaccactcgtggggccaacagcagtcgccgcaagccgcctacgaccca
caaaggttggaacttcgcagaaggctgcaagccatcttccccccgcagcaggtcgatgca
gtcatgggaatgtttccacacgtgatgaatgctgagaaactggccgcagagatcctcaac
cgtaaggctcagcgaggggtgttctga
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