Gasterosteus aculeatus (three-spined stickleback): 120810234
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Entry
120810234 CDS
T07457
Symbol
gsdmeb
Name
(RefSeq) gasdermin Eb
KO
K22146
gasdermin-E
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
120810234 (gsdmeb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gat02000
]
120810234 (gsdmeb)
Transporters [BR:
gat02000
]
Other transporters
Pores ion channels [TC:
1
]
120810234 (gsdmeb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gasdermin
Gasdermin_C
Motif
Other DBs
NCBI-GeneID:
120810234
NCBI-ProteinID:
XP_040020537
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All DBs
Position
XX:complement(9688129..9692179)
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AA seq
463 aa
AA seq
DB search
MFATATRNFVQEVDRGGLLIPVSSLNDTIALLTVVVKRKRFWLWQKAKYIPTDFTLNDIL
TGDAPIKPGVTETDFIKYDGTFGDNIQATVDANFNSANVSLEGKDSSKLQSSFGSLKKEE
LEVQKLLLDCKERILDMSHGLIQQTKEKRRRVFGIVKERILTTQPCSVIEEVQQGVQFAG
GLSLCGPRCTKVSLKENGSLSKDSNITMEIPVLTPIAYSLIELEVKQDGRYELCLMSYTS
GFLEVDGLACEGLASVGAAASGNLHLRQELEQLRDHFQLLSSLPATTRSSLLQQITQVMV
DRLALASLQSVLERMCVDEAPVVEDDTTTDSPNQSVRAILDLLEQSGQVDSRRALSAFHL
ITSAMDEMTNDCLSLLGMFCSLTVLPALELLVQCVSGKGELPLSSAGLAALTEDVYEKTE
RLFASSNVSLMRDGSTVKTTISSRVCPALVLCIAVRGLASLAH
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgttcgccacggccaccaggaacttcgtgcaggaggtggaccgcggcggtctgctgatc
ccggtgtccagcctgaacgacacgatcgccctcctgacggtggtggtgaaacgcaaacgc
ttctggctgtggcagaaggccaagtacattcctaccgatttcaccctcaatgacatactg
acgggagacgcgcccattaagccaggcgtcacggagacagatttcatcaaatacgatggg
acttttggggacaacattcaggcaactgtcgacgcaaatttcaacagcgccaatgtgagc
ctggagggcaaagactcgtccaagctccagtcgtcatttggcagtttaaaaaaagaagaa
ctggaggtgcagaagttgctgctagactgcaaagagaggatcctggacatgtcccacggg
ctgatccagcagacaaaagagaagcgcaggcgggtttttgggatcgtgaaggagcgtatt
ttgaccactcagccctgctcagtcatagaggaggtgcagcagggagtacagtttgcagga
ggcctgagcctctgcgggcccaggtgcacaaaggtttccttgaaagagaacgggagcttg
agtaaagacagtaacatcaccatggagattcccgtcctcactcccatcgcatattccctc
atagagctggaggtcaaacaggacggacgctatgagctgtgtctgatgtcgtacaccagt
ggatttcttgaagtcgacggcctggcgtgcgaaggactggctagcgttggagctgctgcc
tctgggaatctccaccttagacaagagctggagcaactgcgagatcatttccagctgctc
tcctctcttcctgccaccacgaggtcttctctactgcaacagatcacacaagttatggtt
gaccgactggccctcgcttcactgcagagtgtgttggaacggatgtgcgttgatgaggcg
cctgtcgtggaggacgacacaacaacagattccccaaatcagagcgtccgagctattctc
gaccttttggagcagtctggtcaagtggattccagacgggcgctctctgcatttcacctc
attaccagcgccatggatgagatgacaaacgattgtctttctcttttgggaatgttctgc
agcctcactgtgttaccggctctggagctactggtgcagtgtgtatcggggaagggggag
ttgcctctgagcagcgcaggcttggccgcactgacggaagacgtctatgagaagaccgag
cgcctttttgcctcctccaatgtgtctctgatgagagatggaagcacagtgaaaaccaca
ataagcagcagagtttgccccgctttggtcctttgtattgctgtcaggggtctcgcctcg
ttggcccactga
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