Gasterosteus aculeatus (three-spined stickleback): 120810238
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Entry
120810238 CDS
T07457
Name
(RefSeq) ankyrin repeat and IBR domain-containing protein 1-like
KO
K11967
ankyrin repeat and IBR domain-containing protein 1 [EC:
2.3.2.31
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gat04121
]
120810238
Enzymes [BR:
gat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
120810238
Ubiquitin system [BR:
gat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
120810238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
IBR_1
Ank_5
Ariadne
Ank
Ank_2
IBR_2
Ank_4
UBA_ARI1
Ank_3
zf-C3HC4_2
zf-C3HC4
zf-RING_2
Rcat_RNF216
zf-RING_UBOX
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
120810238
NCBI-ProteinID:
XP_040020548
UniProt:
G3NSR5
LinkDB
All DBs
Position
20:13503383..13529121
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AA seq
1105 aa
AA seq
DB search
MGNTATKFRKALVNGDDVLACHLYESNPQFKEALDPNSTYGESYQHNTPLHYASRHAMAR
LLRSFLFGKDGNPNKRNVHNETSLHLLCMGPQILTSEGALQPRISRPYEDKQRRAESLQI
ILAWTGAKLDHGEYESADINATDNKKNTCLHYAAASGMKTCVEFLLQRGADLFAENEDRE
TPCDCAEKQHHKELALCLESQMVFSLAPEAEGIEAEYAALDRRELYEGLRPQDLRRLKDM
LIVETADMLQAPLFTAEALLRAHDWDREKLLEAWMSNAVECCQRSGVQMPNPPPSGYNAW
DTLPSPRTPRITRSSITSPDQISLTPAEEESSLCGICMSSISVFEEPVEMSCGHEFCRPC
WEGFLNLKIQEGEAHNIFCPAFDCYQLVPVEVIESVVSREMDRRYLQFDIKAFVENNPAI
RWCPEAGCEMAVRLSTQGPGTSTSDSLSFPLLRAPAVDCGKGHLFCWECQGEAHEPCDCE
TWKLWLQKVTEMRPEALAGVSEAYEDAANCLWLLSNSKSCTNCKSPIQKNEGCNHMQCAK
CKYDFCWICLEEWKKHSSSTGGYYRCTRYEVIQQVEEQSKEMTEEVEKKHKSFQELDRFM
HYYTRFKNHEHSYQLEQRLLKTAKEKMEQLSRALSGMEENPPDTTFIEDAVLELLKTRRI
LKCSYPYGFFLEPKCTKKEIYELMQTDLEMVTEDLAQKVNRPYLRTPRHKIIRAACLVQQ
KRQEFLASVARGVAPNDSPEAPRRSFAGGTWDWEYLGFASPEEYAEFQYRRRHRQRRRGD
MSSLRSNTPDPDDSGNSILDTQAVRGGRRHHQMSLGSLDDDDPNILLAIQLSLQDSAMAE
IGSNHDALGTSLPSRLEQHAPGVEVLSRASLSSSELLELGDNFARLGNIGTSRQHSAATG
VSASVQHCDRHPRAFGASLPTPVGPRGSDSSTGLFSSSSDTLDLTTCGSHDPSTSSAANA
NLLGNIVAWFHDMNPQGITLVPSTSSDTDSNLGTLCSAGEGERPQEDEKGGGVPPDCRRP
REVGFFSQRLGDTEECAVAQRPTQLDLVGLDTMALPYAATLNTGGDHGQRRGSKVCRVDT
PQCDSVSDHLPSSSSSEWEDQVHLV
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggggaacacggcgaccaagttccgcaaggctctcgtcaatggcgacgacgtgctggcc
tgccacctgtatgagagcaacccgcagttcaaggaggctctggatcccaactctacatac
ggagagtcctaccagcacaacactccactgcactatgcttcccggcacgccatggcccgc
cttctcaggtctttccttttcggaaaagatgggaatcctaataaacgtaatgtgcacaat
gagacatctctgcaccttctctgcatggggccgcagatcctcacctctgagggggccctg
caacctcggatctcacgcccatatgaagacaaacagcgtcgggccgaatccctgcaaatc
atcctggcgtggaccggagcaaagctggaccatggagaatacgagagcgccgatatcaat
gccactgacaacaagaaaaacacctgcctccactatgcggctgcgtcaggcatgaagacg
tgtgtggagttcctgttgcagagaggagcggacctgtttgccgagaatgaagatcgcgag
actccatgtgactgtgcagagaagcagcaccacaaggagctggccctctgcctggagtcg
cagatggtcttctcgcttgcccccgaggcagagggtatagaggcagagtacgcagccctt
gaccgaagagagctgtatgaaggcctgcggcctcaggatctacggaggctgaaggacatg
ctgatagtggagacagccgacatgctgcaggcccctctcttcactgcagaggcactgcta
cgtgcccatgattgggacagggagaagctcctcgaggcctggatgagcaacgcagtggaa
tgctgccaacgctcgggggtgcagatgcccaacccgcccccaagcggttacaacgcctgg
gacaccttgccctcaccccggacgccacgcatcacccgctcctccatcacttctcctgac
caaatcagcctgacgcctgccgaagaggagtcctctctgtgtggcatctgcatgtcttcc
atttctgtcttcgaggaacctgttgaaatgtcctgtggccatgagttttgcagaccatgc
tgggaagggtttctaaatctaaagattcaagagggggaagcccacaacatcttctgcccg
gcctttgactgctaccagctagtgcctgtggaagttattgagagtgtggtgtctagagag
atggataggcgctacctccagtttgacatcaaggcatttgtggagaacaatccggcaatc
cgctggtgtcctgaggccgggtgtgaaatggcggtgagactgagcacgcagggtcctggg
acctccacctcagactctcttagctttcccctccttcgggctccagccgtggactgtggc
aaaggtcacctcttctgctgggagtgtcaaggtgaggcccatgagccctgtgactgtgag
acctggaagctgtggctccagaaagtcaccgagatgagaccggaggcattggctggtgtg
agtgaagcttatgaggatgcagccaactgcttgtggctgctgtcgaactccaaatcctgc
accaattgcaagtctccgattcagaaaaatgagggctgcaaccacatgcagtgtgctaag
tgtaagtatgacttctgttggatctgtctggaggagtggaaaaagcatagctcatcaaca
ggaggctactatcgttgcactcgctacgaagttatccagcaggtggaggagcagtcaaag
gagatgactgaagaggtagaaaagaagcacaagagctttcaggaacttgaccgttttatg
cactactacacacgcttcaagaaccacgagcacagctatcagctggagcagcgcctgtta
aaaacagccaaagagaagatggagcagctcagtcgagccctgagtggaatggaagaaaac
ccacctgacactacgttcattgaagatgcagtcctagaactactaaagacacgccgcatc
ctcaagtgctcttatccttatgggttctttcttgagcccaaatgcacaaagaaggagatc
tacgagcttatgcagacggacttggagatggtgacggaggacctggctcaaaaggttaac
cggccttatctaaggacgccgcgccacaaaatcatccgtgcagcatgtctcgttcagcag
aagaggcaggagtttctagcctcagtagccaggggagtggcccccaatgactctcctgag
gcccccaggcgcagttttgctggcggaacgtgggactgggaatatttaggctttgcatca
cctgaggagtacgcagagttccagtacagacggaggcacagacagcggaggcgaggtgac
atgtccagtctccgtagcaacacacccgaccctgatgattccggcaacagcattttagac
acacaggcggtcagaggcgggcgtagacatcatcagatgagtctaggttctctggatgat
gatgatccaaacattctactggccattcagctgtccctccaggactctgcgatggcagag
attgggtccaaccatgacgcgctcggcacctcgctgccttctaggctcgagcagcacgct
ccgggcgtagaggtcctttccagagcttctctaagcagctcagaactgctggagctggga
gataactttgccagacttggcaacatcggcaccagcaggcagcactcggccgcaaccggt
gtctccgcctctgtgcagcactgtgacagacaccctagggccttcggggcttcactgccg
acaccagtgggtccacgaggcagcgactcatcgacgggcctcttctcgtcttccagcgac
acgttggacttgaccacatgcggcagccacgacccctccacgtcctccgcagcaaacgcc
aatttgctgggcaacatcgtggcctggttccacgacatgaatccccaaggtatcaccctg
gtcccctccacctcctctgacaccgactcaaacctcggcacactctgctccgccggtgaa
ggggagcgcccgcaggaggacgagaaaggcgggggggtcccgcctgactgcaggagacct
cgggaagtgggtttcttctcccagcgactaggcgacacggaggagtgtgccgtcgctcag
aggccgacgcagttggatctggtggggctggacaccatggcgctgccctacgcggccacc
ctcaacacaggcggggaccacggccaacggaggggctcaaaggtctgccgcgtcgacact
ccgcagtgtgactcggtctccgaccatctgcccagcagcagctcctctgagtgggaggac
caagtgcacttggtgtga
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