Gasterosteus aculeatus (three-spined stickleback): 120810291
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Entry
120810291 CDS
T07457
Symbol
si:dkey-24p1.1
Name
(RefSeq) B-cell receptor CD22 isoform X1
KO
K06467
CD22 antigen
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120810291 (si:dkey-24p1.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gat04515
]
120810291 (si:dkey-24p1.1)
04090 CD molecules [BR:
gat04090
]
120810291 (si:dkey-24p1.1)
04091 Lectins [BR:
gat04091
]
120810291 (si:dkey-24p1.1)
Cell adhesion molecules [BR:
gat04515
]
Immunoglobulin superfamily
SIGLEC family
120810291 (si:dkey-24p1.1)
CD molecules [BR:
gat04090
]
Proteins
120810291 (si:dkey-24p1.1)
Lectins [BR:
gat04091
]
I-type lectins (Siglecs)
120810291 (si:dkey-24p1.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_2
Ig_3
I-set
ig
Ig_CD22
V-set
Ig_4
Ig_5
Ig_C17orf99
C2-set_2
Izumo-Ig
C2-set
MHC_II_alpha
Ig_ADGRF3
Ferlin_C
DUF6377
COX2_TM
Motif
Other DBs
NCBI-GeneID:
120810291
NCBI-ProteinID:
XP_040020644
LinkDB
All DBs
Position
XX:5365206..5386029
Genome browser
AA seq
1022 aa
AA seq
DB search
MKAHSVWWLVVLAILKNVSCSEATVFELVTTSLTAKEGSCVEISCRVNGRVKAAGAHWFW
IKDVVWSKTVLIGTVIYSMNKSLIPVSTDFADRVKGISSLLPASGGYLTISKKSSILLCN
LKKSDNGKYFFRFDGEEKWYTDPVILYVKDNPCLITFQQPPVFKENDTATLTCSTLSSCG
LNPVIKSSSPRSPTSHLTHPQESRNQKSTSLSFTVNWQHDGEEFSCQTDDSDRYLIRNIS
LTVEYAPRDTQAEKHPADVVEGGSVTLKCVANGRPDPNFTWFGNENKEIGRGAEHKITLI
VESQSGEYHCEATNKLGTMKSNPVNINVTYRPEVEVSMSPTATVRQGDVMTLTCRVRRSN
PLPHTFTWFKDEKALSEERTERYVVQSIQPEDAGVYKCSAINVRGEGTSVPFRVKVQYGP
RRTNISISEDDERVGVGKSLTFYCQTEANPSPLGYSWYRDNEIMEIDSSRWKYETTRDNK
RTLVTVERTDEGCYTCKATNFINTGKQSEPVCIEVLYAPTSPSLSMKTEVREGQLVSISC
SVESSPPSKLTLTLTSESNPPSSKVLFTHPGSDRRPNNLYHTFHVTYTHAGFYTCDATNT
EGSMTSERKKLEVKYSPKDVSVIARPSLVVEEKEPLTLECSARSDPPVTSVTWRKMSDGA
TEILGKTQTFSLKSVGPSDSGQYSCEASNDVGTGNSPQTELRIKYAPKLTKITETEHWGA
DGTSSVTLSCSSHSYPPITQYLWYKENHKAANKKVSISDHQNYTVYSDQPGSYYCVATND
IHQRASSPVHLFERNVLKTVLIILFIVFLLTIFLIVVVYRQKRKRSSEQAATNTFGFLWE
PIQRWWNSSERNRTNGRGAEDDLCPDRPKAPRCKSHPDSTPAANIHSIYCTVNEPSGQHG
PPALNGITEKGVNTPEDSLNYASVHFGKINQRAKAGEDVYAKVSKQKPPKKSEERQEDYE
NASSAHLARDPDPWSYDTDSSEEEVEVHYSQVTFAAKPGRGGGGWYSSSSEGDETQYSEV
KV
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctcactcagtttggtggttggtggttctggcaatattaaaaaatgtttcttgt
agtgaagcaaccgtcttcgaactggtcaccacgtccctgacagctaaagagggatcctgc
gttgaaatcagctgcagagtcaatggaagagtgaaagctgctggtgctcactggttttgg
ataaaggacgtagtgtggagtaaaacagttttgattggcaccgtcatctacagcatgaat
aagtcactcattcctgtcagcacagactttgctgacagagtgaaaggaatcagttctctt
ttaccagcttcaggaggttatcttacaatctcaaaaaagagcagtattttactctgcaac
ttgaaaaagtccgacaatggaaaatatttctttagatttgatggggaagaaaagtggtac
accgacccagtgatactatatgttaaagacaatccatgcctgatcacttttcagcaaccg
cccgtcttcaaggaaaacgacacagcaacgctcacttgctccactttgagttcatgtggt
ttaaacccagtaatcaaaagttcgagtccacggtctccgacttcacacctaacgcatcca
caggagagcagaaatcagaagagcacctcgctcagttttactgttaactggcagcatgac
ggagaggagttttcctgccagacagatgacagcgacagatatttgattcgaaatatcagc
ttaactgtggaatatgctcccagagacacacaggctgaaaaacaccctgcagatgttgtg
gagggaggatctgtgactctcaaatgcgtcgccaacggacgtccagatcccaacttcaca
tggttcggaaatgaaaataaagaaattggaagaggggccgaacataagatcacattgatt
gtagagtcacagagtggggaataccattgtgaagctacaaacaaactggggacaatgaaa
tcaaaccctgtcaacattaacgttacataccggcccgaggttgaggtgtccatgtcccct
actgccacagttagacaaggagatgtgatgactttgacatgtcgtgtgaggagaagcaac
ccgctacctcacactttcacctggtttaaggatgagaaagccctcagcgaggagaggacg
gagcggtacgtcgtccagagcatccagcctgaggacgcaggcgtttacaagtgttcggcc
attaacgtccgaggcgaaggaacatcggtgccctttagggtcaaagttcaatatggcccg
aggaggacaaacatttccatcagtgaagatgatgaacgtgtgggagttggtaaatctctg
acattttattgtcagactgaggccaatccctccccgcttggatactcctggtaccgagac
aatgaaatcatggagattgactcctcacggtggaagtatgagacaaccagagataacaaa
cgaacgctggtcacagtagagagaacagatgaaggttgttacacgtgcaaagcaaccaac
ttcatcaatacagggaagcaaagcgagccagtgtgcatagaagtgctctatgctcccacc
agtccatcgctatccatgaagaccgaggtcagggaaggtcagctggtctccatcagctgc
agcgttgaaagctccccgccctcaaagctcaccttgacactgacctcagagtcaaatcct
ccgtcttcaaaggtgcttttcactcatcctggtagtgaccggcggcccaacaatctctac
cacacgtttcacgtcacttacacccacgctggcttctacacctgcgacgccaccaacacc
gaaggctcaatgaccagcgaacggaagaagctggaggtgaaatatagtcccaaagacgtg
agcgtaatcgctcggccttccctcgtcgtggaggagaaggagccgttgactctggagtgc
agcgcccggtccgacccaccggtgacctctgtcacctggaggaagatgagcgatggcgcg
accgagatcctcgggaagacgcagaccttctccctgaagtcggtcggcccttccgacagc
ggacagtacagctgtgaagcgagcaacgacgtgggaaccggaaactcaccgcaaaccgag
cttagaatcaagtatgccccgaagctgacaaagatcacagagacggagcattggggggcc
gacggcacaagttctgtgacgctgagctgcagcagccacagctacccgccgatcacgcag
tacttgtggtacaaggagaaccacaaggcagcgaataaaaaggtgtccatcagcgaccat
cagaactacacggtgtattcagaccaaccgggatcctactactgcgtcgcaacgaacgac
atacatcagagagcgtccagccccgtccatctgtttgagcgaaacgtcttgaagaccgtg
ttgatcatcctgtttatagtctttctactcaccattttcttgattgtcgttgtctataga
caaaagaggaagcgatcaagtgaacaagcagctacaaacactttcggttttctgtgggaa
cccattcagcgctggtggaacagcagcgagaggaatcggacgaacggccgcggtgcagag
gatgacctctgcccggaccgtccaaaggccccacgatgcaagtctcatccagacagcaca
cctgcagccaacatccacagcatttactgcacggtgaacgagccctcgggacaacacggt
cctcctgcactaaacggaatcacagagaaaggtgtgaacacaccggaggattccctcaac
tacgcctctgtgcactttggaaaaataaaccaacgggcaaaggcgggagaagatgtgtat
gctaaagtgtccaagcaaaagccgcctaaaaagagcgaggaaaggcaggaggactacgag
aacgccagctccgcccacctggccagagatccagatccatggagctacgacacggactcc
agcgaggaggaggtggaggtccactactctcaggtgaccttcgcggcgaagcccggacga
gggggaggcggctggtactccagcagctccgagggagacgaaacgcagtactctgaggtc
aaagtgtga
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integrated database retrieval system
