Gasterosteus aculeatus (three-spined stickleback): 120810339
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Entry
120810339 CDS
T07457
Symbol
msh5
Name
(RefSeq) mutS protein homolog 5 isoform X1
KO
K08741
DNA mismatch repair protein MSH5
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gat03036
]
120810339 (msh5)
Chromosome and associated proteins [BR:
gat03036
]
Eukaryotic type
Meiosis-specific proteins
Others
120810339 (msh5)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
Motif
Other DBs
NCBI-GeneID:
120810339
NCBI-ProteinID:
XP_040020741
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Position
XX:8692848..8702303
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AA seq
819 aa
AA seq
DB search
MAELESLRGGGRGGRNFGPPEIPGDEDEEEDSPTVLLSVLAQQGQMGLCFYDSKDSSLHY
MRDTPDTYELHLLARVLREVSPHVIITSAKQERCMTRFLQQLGLNPDYKPEVVTYPYVDF
GLEVGKQRLLSAHLPFLPTYISERDKMSYISSSISFDSPLVLRALGALLKCLDRRRVGVE
LEDSSVGVPILQFNAYTLKGVVCIDPDTYSVLQIFKSEVHPSVYKLHSGEKEGLSLYGIL
NRCRCKFGSKLLRQWFLRPTQDLAVLHRRQEVIRFFTSPRNSDALNTLQSSLRNISNIPT
LLHRMSLSHTKVSDWRSLYKTVYNVVCIRDTVRHLPQSIHLFRDIGEGFSDDLHHIASLI
SRVVDFETSIAESRFTVKPNVDPAIDEKKRKMMGLSDFLTDVARRELEHLDARIPSCCVI
YIPLIGFLLSVPRLPSMVEKEDFEIEGLDFMFLSEERLHYRSQRTKELDDLLGDLHCVIR
DMETAVMIQLQSAVLERSASLYKVLDLTAELDCLMAMSTASQEYGYTCPTLASHRKITVT
QGRHPLLELCSPVFVANSFHSSESQGRVKIITGPNSSGKSIYLKQVGLIVFMALIGSDVP
AKEAEIGLVDGMFTRMQSRESVSVGLSTFMIDLNQMATALNSSTGNSLVLIDEFGKGTNT
VDGLSLLAASISHWLRNPPEDVPHVLLATNFHSLLQLGLLPSSGLLCLLTLETAVDGDEL
VFLHQLKEGICQSSYAANIAALAGLPTSLVHRGVEVSELFRTGRLIKRIDRASSDERTNR
CRSLVEAFLSLDLDDNELNLQNFMTEELLPSAGELLNHS
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggcagaactggaaagcctgagaggaggaggaagaggaggaaggaactttggtccaccg
gagataccgggagatgaagacgaggaggaagactcaccgacagttttactgagtgtttta
gcccagcagggacagatgggcctctgcttctacgacagtaaggactcgtctttacactac
atgagagacactccggacacctacgagctccacctcttggccagagtcctgcgggaggtc
agtcctcatgtcatcattaccagtgcaaagcaggagcgctgcatgactcgcttcctgcaa
caactcggtttaaacccagactacaaaccggaggtcgtcacttatccatatgttgacttt
ggtctggaggtcggtaagcagaggttactttccgcccatctgcctttccttcctacctac
atttcagaaagagacaaaatgtcctacatctcctcctctatctcctttgactcacccctg
gtgctcagggcattgggcgctctgctgaaatgtctggacaggaggagagtgggagtggag
ctggaagacagcagtgttggagttcctatcctacagttcaacgcctacacacttaaaggt
gttgtttgcattgaccctgacacctacagtgtactacagatcttcaaatcggaagtccac
ccatcagtgtacaagctgcattctggtgaaaaggaaggactcagtctatatgggatactg
aaccgctgcaggtgcaagtttggctcaaaactgctacgccagtggtttctccggcccaca
caggacctggccgtgttacacaggagacaggaagtaatacgtttcttcacgtcacctcgt
aactctgacgccctgaacaccctgcaatcctcgctacgcaacatcagtaacataccaact
cttctgcacaggatgtctctgtctcacactaaagtgtctgactggcggagcctctacaag
acagtgtacaacgtggtgtgtatcagggacacggtgcgacacctgcctcagtctattcat
ctctttcgtgatatcggtgaaggtttctctgatgacctccaccatattgcctccctcatc
agccgagtcgtggattttgaaacaagtatagctgagagccggttcaccgtcaaaccgaac
gtggacccggcaatcgatgagaagaagagaaagatgatggggttgtctgacttcctgaca
gatgtagccagaagagagctggaacatctggacgcccgcattccctcctgctgcgtcatc
tacatccctctgattggattcctgctctccgtccctcggctgcccagcatggtggagaaa
gaagattttgagatagaagggcttgatttcatgttcctctcagaggaacgtctgcactac
cgcagccagagaaccaaggagctagacgacctcttaggagacttgcactgtgtcatcaga
gacatggagacggcagtgatgatacagctgcagagtgcagtcctggagaggagcgcgtcc
ctgtacaaggtacttgatctcactgccgagctggactgtctgatggcaatgagcaccgcc
tctcaagagtacggctacacctgccccactctagccagccacaggaagataacggtcaca
cagggcagacacccgctgttggagctgtgctctcctgtgtttgtggccaactccttccac
agctcagaatcgcagggcagggtcaagatcatcaccggccccaactcatctggcaagagc
atctacctcaaacaggtgggtctgattgtgttcatggctctgattggctcagacgtccct
gcaaaggaggcagagatcggtctggtggacgggatgttcacccgaatgcagagcagagag
tctgtgtctgttggtctcagcacgttcatgatagacctcaaccagatggccacggctctc
aacagcagtactggtaactcattggttctcatcgatgaatttggaaagggaactaacaca
gtggatggactctctttgttggcagcatcgatctctcattggctgagaaaccctccggag
gatgttcctcatgtcctgttggctacgaacttccacagcctgctgcagctgggcctgctg
ccctcctctggcctgctgtgccttctgactctggagacggcagtggacggggatgagttg
gtgtttctgcaccaactgaaggaaggaatctgccagtccagctatgccgccaatattgct
gcactggcaggcctgccaactagccttgtgcatagaggagtggaggtgtccgagctgttc
aggacagggcggctcatcaagcgaatcgacagagcgtcgtctgatgagcgaacgaaccgg
tgcaggtctttggtggaggccttcctgagcctcgacctggacgacaacgagttgaacctt
cagaacttcatgacagaggagctcctgccctctgctggggagctgctgaaccacagctga
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