Gasterosteus aculeatus (three-spined stickleback): 120810398
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Entry
120810398 CDS
T07457
Name
(RefSeq) B-cell receptor CD22-like
KO
K06467
CD22 antigen
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120810398
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gat04515
]
120810398
04090 CD molecules [BR:
gat04090
]
120810398
04091 Lectins [BR:
gat04091
]
120810398
Cell adhesion molecules [BR:
gat04515
]
Immunoglobulin superfamily
SIGLEC family
120810398
CD molecules [BR:
gat04090
]
Proteins
120810398
Lectins [BR:
gat04091
]
I-type lectins (Siglecs)
120810398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_2
Ig_3
ig
I-set
V-set
DUF2808
C2-set_2
K319L-like_PKD
Ig_5
Ig_7
Ig_4
Ig_CD22
Trehalase_Ca-bi
NTCP5_P3_N
Motif
Other DBs
NCBI-GeneID:
120810398
NCBI-ProteinID:
XP_040020832
LinkDB
All DBs
Position
XX:complement(5429395..5463284)
Genome browser
AA seq
1301 aa
AA seq
DB search
MTGAAQLLLLCCLLQGSLCENWGTFLPERLEGLSGSCVMIPCTFSILSEYDTKLQDDDTC
IAKWITGSTSGPTVFNSGLTANGNTLQGNLTGNLRAKNCTTVFHNMSPQDNNKYYFRLEC
KSPFKFILDKNVQITITDSLPKPSITPPPVEVKEGDPVRLECSAVAPCPLLPPALTWTPA
IGDVKENQQSASVSSVLNFTASRLHNGQRLQCSALYRRQAGHSDLQYENNLTLRILYPPK
NTSVSVDPFGPVPDGSSVTLTCTSVANPAAANFSWFRFAGGEKELISSERDFTFNVTKLS
HDQYVCNALNVHGDDDSELVSIDVTFAPQILPSSRCVSIGSLIRCDCNSQGNPPPSLFWE
LPGKAVDHSVIPTREVPLGSLVMWSQITVNYLDEDVLSLVCLSNNSVGSDRFVFNVSSTN
TTPGLYPLSLLIGSLVGAIGTMLVCGLMLLFFFRKGKIRLPTKKRSQNNVVVADETSSSN
VSVIYDNKAILEENEEESLHYASLDFAKLKDNSRGELGEEEVRGLASKTSEYAEIRLSSR
GSNGGHTREEETEADVHQGEGMLESMTGAAQLLLLCCLLQGGLCQNWASFMPQRLEGLSG
TCVMIPCTFSILPTFDQYLDDTCVAIWKTGSTSGPTVFNSGLTANRNTLQGNLTGNLRAK
NCTTVFHNMSPKDDNTYYFRVQCNNDLKYNFPTNVQITITDSLPKPAITPPPVEVEEGDP
VRLECSAVAPCPLLPPALTWTPAIGDVKENQQSASVSSVLNFTASRLHNGQRLQCSALYR
RQAGHSDLQYENNLTLRILYPPNNTSVSHSGPVIEGTSVNLTCNTDANPAVDEFTWYKVD
GGQVVAVGFHALLSTNVSEADSRFFCQVSNRYGSQNSSTTQIDVQFPPKGTTVIVQPDGP
ILEGVSVSLLCKSRANPPVTNYTWYKDDEEEEEEPGSSLKLGAVDPSQIGLYRCKARNDL
GEDQSAAIQLDIQYPPQNTSVSVDPSGPVPDGSSVTLTCTSVANPAAANFSWFRFAGGEK
VLISSERDFTFNVTKLSHDQYVCNALNVHGDDDSELVSLDVTFAPQILPSSRCVSIGSLI
RCDCNSQGNPPPSLFWELSGKAVDHSVIPTREVPLGSLVMWSQITVNYLDEDVLSLVCLS
NNSVGSDRFVFSVSSANTKPGLYPLSLLIGSLVGAIGTLLVCGLMLLFFFRKGKIRLPTK
KRSQDNVVVADETSSSKVSVIYDNKAILEENEEESLHYASLDFAKLKDNSRGELGEEEVR
GLASKTSEYAEVRLSSRGSNGGHTREEETEADVHQGEGMLS
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atgacaggtgctgcccagcttctcctgctgtgctgcctcctgcaaggtagtttatgcgag
aactggggaaccttccttcctgagagactggagggactcagtgggtcctgtgtgatgatc
ccctgcactttcagcattctctcagagtatgatacaaagctacaggatgatgatacctgt
atagccaaatggatcacaggctctacgagtgggccaacggtgttcaactcgggcctcact
gcaaacggaaacactctgcaaggaaacctgacgggaaacctgcgtgcaaagaattgcacc
accgtcttccacaacatgtcgccacaagataataacaaatattacttcagactggagtgt
aagagccctttcaagttcatcctagataaaaacgtccagatcaccatcacagattcactt
cctaaaccgtccataactccacccccggtcgaggtgaaggaaggagatccagtgaggttg
gagtgctcggctgtagctccctgcccccttcttcccccggctctcacttggacccctgct
atcggcgacgttaaggagaaccaacaaagtgcatccgtgagctccgttctgaacttcact
gcttcccgcctccacaacggacagaggttacagtgctctgctctctacagacgacaggct
ggacacagtgaccttcagtatgaaaataatctgaccctccgcattctttatccccctaag
aacacctcggtgtcagtcgacccctttggtccggtgccggatggcagctccgtcactctg
acctgcaccagcgtcgccaatccagcagcagccaacttcagctggttcagatttgccgga
ggagagaaggagctgataagctccgagcgagacttcactttcaatgtgaccaaactctcg
cacgaccagtacgtctgtaatgctctgaatgtccacggagacgatgactcagagctcgtc
agtattgatgtcacatttgctccacagattctgccttcttcacgctgtgtcagcattggt
tccctgatacgatgtgactgtaacagccaggggaaccctcctccctctcttttttgggaa
ttgcctgggaaggctgtcgatcactctgtcatcccaaccagggaagttccccttgggagt
ttggtcatgtggagccaaatcaccgtgaactatttggacgaagacgtgctctctctagtc
tgccttagtaacaactctgtgggctccgatcgcttcgtattcaacgtgtcctccaccaac
actacgccaggcctctatcctttgtctctattaatcggctctttggtgggagccatcggg
acgatgctggtgtgtgggctcatgttactgttcttcttcagaaagggaaaaatacgactt
ccaacaaagaagagatcgcagaacaacgttgtagttgctgatgagaccagctcatcaaac
gtcagtgtgatttatgacaataaagccattctggaagagaatgaggaagaatctcttcac
tacgccagtctggactttgctaaactcaaagataattcaaggggtgagctcggggaagag
gaggtcagaggcctggcctctaagacgtctgagtatgcagagatccgtctgtcctccaga
ggaagcaatggaggacacacaagggaggaagagacggaggctgacgtccatcagggggaa
gggatgttggaaagcatgacaggtgctgcccagcttctcctgctgtgctgcctcctgcaa
ggtggtttatgccagaactgggcgagcttcatgcctcagagactggagggactcagtggg
acctgtgtgatgatcccctgcactttcagcattctcccaacatttgatcaatacctggat
gatacctgtgtagccatttggaagacaggctctacgagtgggccaacggtgttcaactcg
ggcctcactgcaaacagaaacactctgcaaggaaacctgacgggaaacctgcgtgcaaag
aattgcaccaccgtcttccacaacatgtcgccaaaagatgataacacatattacttcaga
gtgcagtgtaacaacgacttgaagtacaactttccaacaaacgtccagatcaccatcaca
gattcacttcctaaaccggccataactccacccccggtcgaggtggaggagggagatcca
gtgaggttggagtgctcggctgtagctccctgcccccttcttcccccggctctcacttgg
actcctgctatcggtgacgttaaggagaaccaacaaagtgcatccgtgagctccgttctg
aacttcactgcttcccgcctccacaacggacagaggttacagtgctctgctctctacaga
cgacaggctggacacagtgaccttcagtatgaaaataatctgaccctccgcattctttat
cctccaaacaacacgtcagtcagccactcgggtcccgtgatagagggcacctcggtcaac
ttgacctgcaacaccgacgcaaatccggccgtggacgagttcacctggtacaaagtggat
ggaggtcaggtggtggcagtgggtttccacgctttgctctccactaatgtctcagaggcg
gacagcaggttcttctgccaagtcagtaacagatatggaagccagaactcgtccaccact
cagatagacgtacagtttcctcccaagggaaccacagtcattgtccaacccgacggtccc
atactggagggcgtctctgtttctctgctctgtaagagccgtgcgaacccccccgtgacc
aactacacctggtacaaagatgatgaggaggaggaggaggagcctgggtcgagcttgaaa
ctaggcgccgtggacccgagccaaatcggtctctaccgctgtaaggccagaaacgatctg
ggggaggatcagtcagcagcaatccagctggacattcagtatccccctcagaacacctcg
gtgtcagtcgacccctctggtccggtgccggatggcagctccgtcactctgacctgcacc
agcgtcgccaatccagcagcagccaacttcagctggttccgatttgccggaggagagaag
gtgctgataagctccgagcgagacttcactttcaatgtgaccaaactctcgcacgaccag
tacgtctgtaatgctctgaatgtccacggagacgatgactcagagctcgtcagtcttgat
gtcacatttgctccacagattctgccttcttcacgctgtgtcagcatcggttccctgata
cgatgtgactgtaacagccaggggaaccctcctccctcccttttttgggaattgtctggg
aaggctgtcgatcactctgtcatcccaaccagggaagttccccttgggagtttggttatg
tggagccaaatcaccgtgaactatttggacgaagacgtgctctctctagtctgccttagt
aacaactctgtgggctccgatcgcttcgtattcagcgtgtcctccgccaacactaagcca
ggcctctatcctttgtctctattaatcggctctttggtgggagccatcgggacgctgctg
gtgtgtgggctcatgttactgttcttcttcagaaaaggaaaaatacgacttccaacaaag
aagagatcgcaggacaacgttgtagttgctgatgagaccagctcatcaaaagtcagtgtg
atttatgacaacaaagccattctggaagagaatgaggaagaatctcttcactacgccagt
ctggactttgctaaactcaaggataattcaaggggtgagctcggggaagaggaggtcaga
ggcctggcctctaagacgtctgagtatgcagaggtccgtctgtcctccagaggaagcaat
ggaggacacacaagggaggaagagacggaggctgacgtccatcagggggaagggatgttg
tcatag
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