Gasterosteus aculeatus (three-spined stickleback): 120810408
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Entry
120810408 CDS
T07457
Symbol
tmc4
Name
(RefSeq) transmembrane channel-like protein 4
KO
K21988
transmembrane channel-like protein
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
120810408 (tmc4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gat02000
]
120810408 (tmc4)
03037 Cilium and associated proteins [BR:
gat03037
]
120810408 (tmc4)
Transporters [BR:
gat02000
]
Other transporters
Pores ion channels [TC:
1
]
120810408 (tmc4)
Cilium and associated proteins [BR:
gat03037
]
Other cilia and associated proteins
Stereociliary proteins
120810408 (tmc4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
120810408
NCBI-ProteinID:
XP_040020845
LinkDB
All DBs
Position
20:complement(7070875..7077696)
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AA seq
702 aa
AA seq
DB search
MASEPQRGSREAYDYAEVAQLLPVRNRSDQQSLRLRRVSSRVSNHNYPENDLRPTPAEEN
EEGDSGPPRELKTIPLPMALKRAVRQAQEMHVPVVSRRQAWRRRKSLHKLKEKARECLHF
FTLWRKSLQKIGGNFGGGVESYFLFLRFLVVLNFVSSLLIAGFVLIPSIVFRSVGGSAVN
GTGPDECTVYDPNPQGLDLFYNYFLNLLSGTGFMEYSYLFYGYYNNTTVEDRNFSYNIPL
AYLFTAVFYFVFCLICIIARMGTAAQVAVATGGGAVGNYSVILFTNWDYGCQGDQATKLK
QKNILYRLQVDLEEESRKKKTAALTLGQKLILYSLRVFMFLVSLGLIVAACYGIFKATNF
SQIKSGVKGILGLVYEYLPSIVITIANFLVPLLGDQIARVERYSPSNTVIVALLRAVFLR
LVSLAVLLFTLWRQITCEGNIESPNCKLCHYNYNDHPCWETRVGQEMYKLTLFDFLVNFA
LLFLAEFPRRMVVDNWSSKLAQWVGRQEFVVPANVLGLVYGQTVVWTGALFCPLLPLINT
IKFILLFYFKKTTLFYNCRPALRTFRSTYSTVVFLVVLLFGWGLATVVMVYSLAQISPSR
GCGPFRFFPSMWSIVPTSFYRLSETTQDFLFFIGSQSFSIPLFALSCVVMCYFVALASVY
GKSVALLRAQLKLEGRDKQFLVKQIEELSRHQILKHTAGAYE
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggccagtgaaccacagagaggctcgagagaggcgtacgactacgctgaagttgctcaa
ctgctcccagtgcgtaaccgcagtgaccagcagtcgctgcggttacgacgggtctcctct
cgggtgtccaatcacaactatcctgagaacgacctgcggccgactcctgcagaggagaat
gaggagggcgacagtggaccaccccgggagctcaagaccattcctctgcccatggcgttg
aagagagctgtgaggcaggcgcaggagatgcatgtgcccgtggtttccaggaggcaggcc
tggcgacggagaaagtctctgcataaactaaaagaaaaagccagagaatgtctccacttt
ttcacactgtggagaaagtctcttcaaaagattggagggaacttcggaggtggcgtcgag
tcctacttcctgttcctgcgattcttggtggtgctgaattttgtttcctctttactgatt
gcgggattcgtcctcatccccagcatcgtcttcagatctgtcgggggcagcgccgttaac
ggcactggtccagatgaatgcacagtgtatgaccccaatcctcaaggcttggacttattc
tataattacttccttaacttactttcggggacgggtttcatggagtattcctacctgttt
tacggctactataacaacacaacggtggaggacaggaacttctcctacaacatccccctt
gcctacctcttcactgccgtcttctactttgtcttttgtctcatttgtatcattgcacgc
atggggactgcagctcaagttgccgtggcaacgggaggcggcgctgtgggcaactacagc
gtgatattgttcaccaactgggactacggctgccagggcgaccaagctaccaaactgaag
cagaagaacatcctttaccgactgcaggtggatctggaggaggagagcagaaagaaaaag
acagcggctctgactttggggcaaaaacttattttatactccctacgtgttttcatgttt
ttggtgtcattggggctcattgtggcagcctgctacggcatcttcaaggccaccaacttc
agccagataaagagtggtgttaaagggatcctgggtttggtttatgagtacctaccttcg
attgtcatcaccattgcaaacttcctggtgccgctgcttggtgaccagatcgcccgggta
gagcgatactcccctagcaatactgtcatagtggctctattaagagcggttttccttcgt
cttgtgagtctggctgttcttctcttcaccctgtggcgtcagatcacctgtgaagggaac
atagaaagtccaaattgtaaactgtgccactacaactataatgaccacccgtgctgggag
acgcgcgtgggacaggagatgtacaagctgacactgtttgacttcctcgtcaacttcgct
ttgctcttcttggcggagtttccacgcagaatggtggtggacaactggtccagtaagctg
gctcagtgggtgggtcgacaggagtttgtggttcctgccaacgtgctcggactggtttac
ggtcagacggtggtgtggaccggagctcttttttgcccgttgctgccgctcattaacacc
atcaagttcatactcctcttctacttcaagaagaccacgctcttctataattgccggcca
gcactgaggacgtttcgctccacctactccaccgtcgtcttcctggtggtactcctgttc
ggttggggcctggccacagttgtcatggtttacagtctcgctcagatcagtccttctagg
ggttgcggtcctttccggttcttccccagcatgtggtcgattgttccaacttctttctac
cgcctctctgaaactacacaggactttctcttcttcatcggctcccagtcattctccatc
cccctgtttgcattatcgtgtgtggtgatgtgctattttgtagccttagcctccgtttat
gggaaatctgtcgccctgttaagagctcagcttaaactggagggccgtgacaagcagttc
ttggtgaagcagattgaggagctgagtcgacatcagatactaaaacatacagcaggggca
tacgagtaa
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