Gasterosteus aculeatus (three-spined stickleback): 120810462
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Entry
120810462 CDS
T07457
Symbol
ubr5
Name
(RefSeq) E3 ubiquitin-protein ligase UBR5 isoform X1
KO
K10593
E3 ubiquitin-protein ligase EDD1 [EC:
2.3.2.26
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120810462 (ubr5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gat04121
]
120810462 (ubr5)
Enzymes [BR:
gat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
120810462 (ubr5)
Ubiquitin system [BR:
gat04121
]
Ubiquitin ligases (E3)
HECT type E3
120810462 (ubr5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
E3_UbLigase_EDD
MLLE
zf-UBR
Motif
Other DBs
NCBI-GeneID:
120810462
NCBI-ProteinID:
XP_040020924
LinkDB
All DBs
Position
XX:complement(16916795..16946115)
Genome browser
AA seq
2896 aa
AA seq
DB search
MTSIHFVVHPLPGTEDQLNDRLREVSEKLNKYSYNSHPHLSLLEQATLKQCVVGPNHAGF
LLEDGRVCRISFAVQPDRLELSKPDGGDGSKLSSGSGTGRSSRPGRTSDPPWFLSGSDTL
GRLAGNTLGSRWSSGVNGATGGSGTGGGAGGGGAGGGSSSSGGGGGGGGGGGTSGRSSTA
ARDSRRQTRVIRTGRDRGSGLLGSQPQPVIPASVIPEELITQAQVVLQGKSRSVIIRELQ
RTNLDVNLAVNNLLSRDDEDGDDGDDTASESYLPGEDLMSLLDADIHSAHPSVIIDADAM
FSEEISYFGYPSFRRSSLSRLGSSRVLLLPLERDSELLRERESVLRLRERRWLDGASFDT
ERGSTSREGEPSLDKKNIPVQSPVSLGEELQWWPDKDGVKFVSIGAMFSELVAVSSKGEL
YQWKWSDPEPYRNPQSSSIHHPRVSFLGLANEKITLLSANSIRATVATETNKVATWVDDT
LSTVASKLEHSAQAFPELQGERMVSLHCCALYTCAQLENSLYWWCSGSVHQSHTQNNRGV
VPFSQRKKMLEKARAKNKKPKSSAGISSIPNITVGTQVCLRNNPLYHAGAVAFSVNAGIP
KVGVLLESVWNMNDSCRFQLRSPESLKNMEKTAKTQEIKTETKPELVKTEMGPPPSPAST
CSDTSSIASSASLPYKRRRSTPAPKEEEKVNEEQWPLREVVFVEDVKNVPVGKVLKVDGA
YVAVKFPGTSSSMNNQTTAAAAAAAAAAAAAAAAPTDSDPSSLLQDCRLLRIDELQVVKT
GGTPKVPDCFQRTPKKLCIPEKAEILAVNVDSKGVHAVLKTGNWVRYCIFDLATGKAEQE
NNFPTSNLAFLGQSERNVAIFTAGQESPIILRDGNGTIYPMAKDCMGGIRDPDWLDLPPI
NSLGMGVHSLANLPSNSTIKKKAAIIIMAVEKQTLMQHVLRCDYEACRLYLVNLEQAFLL
DQGGQALRALLDHRCDGNRNILHAAVSVCFPVSNKETKEEEEAERSERNTFAERLSAVEA
IANAISVVSSNSSGNRTGSSSSRGLRLREMMRRSLRAAGLGRHESGPSSGDHQDPVSPPI
APPSWVPDPPPMDPDGDIDFILAPAVGSLTTASTGTSQGPSTSTIPGPSTEPSVVESKDR
KANAHLILKLMCDSVVLRPHLRELLSAKDARGMTPFMLAVSGRAYPAAITVLEAAQKMSK
VGDPGIAEKEDADTVFTEMICPSGTNPDDSPLYVLCCNDTCSFTWTGAEHINQDIFECRT
CGLLESLCCCTECARVCHKGHDCKLKRTSPTAYCDCWEKCKCKTLIAGQKAARLDLLYRL
LTTTNLVTTPNSRGEHILLFLVQTVARQSVEHCQYRPPRIREDRNRKATNAEDSDMPDHD
LEPPRFAQLALERVLQDWNALKSMIMFGSQENKDPLSASSRIAHLLPEEQVYLNQQSGTI
RLDCFTHCLIVKCAPDITFIDTLLGTLVKELQNKYTPGRREEAVNVTRRFLRSVARVFVI
LSVEMASSKKKNNFIPQPIGKCRRVFQALHPYAVEELCNVAESLIVPVRMGIARPTAPFT
LASTSIDAVQGSEELFSVEPLPPRPSPDQSSSSSQTAASYIIRNPQPRRSSQSQPTRGRD
EEQDDIVSADVEEVVEVVEGVAGEEDHHDDQEEQGEENAEAEGQHDEHDEDGSDMELDLL
AAAETESDSESNHSNQDNASGRRSVVTAATAGSEAGSRVSLAFPIFGASSVPAFFSEDDS
QSNDSSDSDSSSSQSDDVDQETFLLDEPLERTTTASHANSAAQAPRSMQWAVRNTPSQRA
AGSAPSSSSTPAASSTGLIYIDPTNLRRSSAISSSAAAAAAALEASNSSSYLTSASSLAR
AYSIVIRQISDLMSLIPKYNQQVYTQYPAAVKLTYPDAVNLQNYVEEKLIPTWNWMVSIM
DSTEAQLRYGSALSSAGDPGHPSHPLHASQHSARRERITAREEASLRTLEGRRRAATLLT
ARQGMMSARGDFLNYALSLMRSHNDEHSDVLPVLDVCSLKHVAYVFQALIYWIKAMNQQT
TLETPQMDRKSIVNPLVLRNREILELGLDNEDSEHENDDDTNQSSTLQDKDEDPVPAEMG
QNHPFFRRSDSMTFLGCIPPNPFDVPLAEAIPLADQPHLLQPNARKEDLFGRPSQGLYSS
SYMATKGLAETNMDRNCLEVNMGSSLPSHSQILPTKMSYSANLKNVMSMETSQRSTENEP
LAEQELEASKPGPSPHDLAAQLKSSLLAEIGLTESDGPPLSTFRPHCSFMGMMISHDMLL
GRWRLSLELFGRVFMEDVGAEPGSILTELGGFEVKESKFRREMEKLRNLQSRDLALEVDR
DRDQLIQQTMRQLNTHFGRRCATTPMAVHRVKVTFKDEPGEGSGVARSFYTAIALALLSN
DKLPNLDCVQSVSKGMQASSTCHHDYNSNLMQRLRNRDRERERRSGGLRAGSRRDRDRDS
RRQLSIDTRPFRPSSEGNPSDEPDPLPAHRQALGERLYPRVHAMQPAFASKITGMLLELS
PAQLLLLLASEDSLRARVEEAMELLIAHGRENGADSILDLGLLEAPEKAQQQENRKRHGS
TRSVVDMELDDPDDGDDNAPLFYQPGKRGFYSPRPGKNTEARLNCFRNIGRILGLCLLQN
ELCPITLNRHVIKVLLGRKVNWHDFAFFDPVMYESLRQLIRHSQAGEADAVFAAMDLAFA
IDLCKEEGAGQVELLSGGVNMPVTPLNVYEYVRKYAEHRMLVVAEQPLHAMRKGLLDVLP
KNALEDLTAEDFRLLVNGCGEVNVQMLISFTSFNDESGENADKLLQFKRWFWSIVEKMSM
TERQDLVYFWTSSPSLPASEEGFQPMPSITIRPPDDQHLPTANTCISRLYVPLYSSKQIL
KQKLLLAIKTKNFGFV
NT seq
8691 nt
NT seq
+upstream
nt +downstream
nt
atgacatctatacacttcgtggttcacccgttgccggggaccgaggatcagctcaatgac
aggctccgcgaggtctcggagaaactcaacaagtacagctataacagtcatccgcacctt
agtctgctggagcaggccaccctaaaacagtgtgttgttggtccaaaccatgccggattc
ctccttgaggatggccgcgtgtgcagaatcagcttcgctgtccagccggaccgcctggag
ctcagcaaaccggatggtggcgatggttcaaagttgagcagtggttcagggacaggaagg
agctccaggccaggcaggactagcgatccgccctggttcctgtctggctctgacacactg
ggcagactggcaggcaacaccctggggagtcgctggagctctggcgtgaacggcgccacc
ggaggcagcggaactggaggtggagcggggggaggcggagccgggggtggcagtagtagt
agtggcggcggcggtggaggcggaggcggcggcggcacgtcagggaggtcgtcaacggca
gcgcgggattcccgcagacagactagggtgatccgtacagggagggaccgcggctcgggc
ctgctgggtagccagcctcaaccggtcattccggcgtctgtcatccctgaagaacttatc
actcaggcccaggtagtccttcaggggaagtccaggagtgtgatcattagggaactccag
cggaccaaccttgatgtcaacctcgccgtcaacaacctgctgagtcgggatgatgaagat
ggcgatgatggagacgacacagccagcgagtcctacctgcctggagaggatctgatgtca
ctgttggacgcagacattcactccgcccatcccagtgtgattattgatgctgatgcaatg
ttctcggaggaaatcagctactttggctacccttcttttagacgctcctcactgtcgcgc
ctgggatcctccagagttctccttcttcccttagagcgcgactccgagctgttgcgtgag
cgtgagtctgtgttgaggttgcgcgagcgccggtggctggacggggcctcgttcgacacg
gagcgaggctccaccagccgcgagggcgagcccagcttggacaagaagaacatcccggtc
cagagccctgtctccttgggagaggagctccagtggtggcctgacaaggatggtgtgaag
tttgtgagcatcggagccatgttctcagagttggtggccgtcagttccaaaggagagctg
tatcagtggaagtggagtgaccctgaaccctacaggaatcctcagagttcttccattcac
cacccgcgggtgtccttcctgggcttggccaatgagaagatcaccctattgtctgccaat
agcatcagagccactgtagcgacagaaaccaacaaggtggcaacctgggtggacgacaca
ctgagcacagtggcctctaagctggagcacagtgctcaggctttccctgagctgcagggg
gagcgtatggtgtcgctgcactgctgtgcgctctacacatgtgctcagctggagaatagc
ctctactggtggtgtagcgggagtgttcatcaaagtcacacgcaaaacaataggggtgtt
gtgccttttagtcaacggaagaagatgctcgaaaaggccagagccaagaacaaaaagcct
aagtccagcgctggcatctcctcgataccaaacatcaccgtgggaacacaagtgtgcttg
aggaacaaccccctctaccacgccggcgcagtggccttctctgtcaatgctgggattccc
aaagtgggcgtcctgttggagtccgtctggaacatgaacgacagttgccggttccagctg
cgctcaccagagagcctcaagaacatggagaagaccgcaaagacccaggaaatcaagacg
gagaccaagccagagctggtgaagactgagatgggtccccctccctccccggcatctacc
tgcagtgatacctcttccatagcgagcagtgcctcgctgccctacaagcgaaggcgttcc
accccggctcccaaagaggaggagaaggtgaacgaggagcagtggccactcagggaggtg
gtgtttgtagaggacgttaaaaatgtccctgtgggaaaggtacttaaagtcgatggcgcg
tatgtagctgtgaagtttccagggacatccagcagcatgaataaccagaccaccgccgct
gccgccgccgccgccgccgctgctgctgctgccgctgctgctcccacagactctgaccca
tcatcactgttgcaggactgcaggctcttgagaatagacgagctccaggtggtcaaaact
ggtgggactcctaaagttccggattgttttcagcgcacacctaaaaagctttgtatccca
gaaaaagctgagattctggctgtgaatgttgactccaaaggagttcacgcagttctaaaa
actggtaactgggtgaggtactgtatctttgacctggccacaggcaaagccgaacaggag
aataacttccccaccagcaacctggccttcctgggccagagtgagcgcaatgtggccatc
tttactgcaggacaggaatctcccatcatccttcgagatggaaatggtacaatctacccc
atggctaaagattgcatgggtggaataagagatcccgattggttggacctgcctcctata
aacagcctgggaatgggagtgcactctctggcaaacctcccctcgaactctacaattaaa
aagaaagctgctattattattatggctgtcgagaaacagactctgatgcagcacgttctg
cgttgtgactacgaggcgtgccggctgtacctggtgaaccttgagcaggctttcctgttg
gatcagggcggccaggccctccgagcccttttggatcatcgctgcgatggaaaccgcaac
atccttcacgcggccgtctctgtgtgcttccctgttagcaacaaggagaccaaagaggag
gaagaagctgaaaggtcagagagaaacacatttgcagagcgtctatctgctgtggaggca
attgccaacgccatctctgtggtttcaagcaacagttctgggaatcggacgggctcctcc
agcagcagagggcttcgtctgagggagatgatgcggaggtctttgagagccgcaggtctt
ggtcgtcacgagtccggcccgtcatccggtgaccaccaagaccccgtttctccgcccatc
gccccaccaagttgggtccctgaccctccacccatggaccctgacggtgacatcgacttc
attctagcaccagctgtgggttcactgaccaccgcctccactgggaccagccagggaccc
agcacctccaccatccccgggccgtccaccgagccatccgtggttgagtctaaagaccgg
aaggccaacgcccacctgatcctgaagctgatgtgtgacagtgtggttctaaggccacac
ctacgggagctactctcggcaaaggatgcccgtggaatgactccgttcatgctggcagtc
agcgggagagcttatccggcagccatcactgtactggaggctgctcagaaaatgtccaag
gtgggtgacccgggcattgcagagaaggaggatgcagacactgtgttcacggaaatgatt
tgcccctctggaaccaacccggatgattcgcctctctatgttctctgctgcaacgacacc
tgcagtttcacttggactggagctgagcacattaaccaggacatctttgagtgtcggacc
tgtggtctgctcgagtccctctgctgctgcacggagtgtgcaagggtgtgtcacaaagga
catgactgcaagctgaagaggacgtctcccacagcatactgtgactgttgggagaaatgt
aagtgtaagacgctgatcgccggccagaaggccgcccgtctggatctgctgtacaggtta
ctcacaaccaccaacctcgtcacaacacctaacagcaggggagagcatatattgttgttc
ctggtgcagactgttgccaggcagagtgttgagcactgtcagtacagaccaccacgcatc
agagaagaccggaaccgcaaggctacaaacgcagaggactctgacatgccagaccacgat
ctagaacctccccgctttgctcagctggctctggagagggtcctgcaggactggaatgcc
ctgaagtctatgatcatgtttggctcccaggagaataaagacccacttagtgccagcagc
agaattgcccacctcctgcctgaagagcaggtctacctgaaccagcagagtggcaccatt
cgccttgactgtttcacccactgcctcattgtcaagtgtgctcctgacatcacttttata
gacaccttgctgggtacactagtaaaggagctgcagaacaagtacactccaggccggaga
gaagaggcagttaatgtgaccaggaggttcctgcgttccgtcgcccgggtgtttgtcatt
ctcagcgtggagatggcgtcatcaaagaagaaaaacaacttcatccctcagcctattggg
aaatgtcggcgtgttttccaagcactgcatccctacgctgtggaggagctgtgtaatgta
gccgagtcgctgattgtgccggtgcgaatgggtatcgcgaggccgactgctccgttcact
ctggccagcaccagcattgacgccgttcagggcagcgaggagctcttctctgtggaaccg
ctgcccccaaggccctcacctgaccagtccagcagctccagtcagacggctgcctcttac
atcatcaggaacccccagcctcggcgcagcagccagtctcagcctaccagagggagagac
gaggagcaggatgacattgtgtcagcagatgtggaagaggtggttgaagttgtagaagga
gtagccggtgaggaagatcatcacgatgaccaagaggaacagggagaggaaaatgcggag
gcagaaggccagcacgacgagcacgacgaagacggaagcgacatggagctggaccttttg
gcagcggctgaaactgagagcgacagcgaaagcaaccacagcaatcaggataatgccagc
ggccgcaggagtgtcgtcacggcagccacagcgggctcggaagcaggcagtagggtgtcc
ttggcatttcctatttttggcgccagcagcgttccggccttcttctcagaagatgactcc
cagtccaatgactccagtgactccgatagcagcagcagtcagagcgacgacgtcgaccag
gagacgttcctgttggatgagccgctggaaaggacaactaccgcctctcatgccaacagt
gcggcccaggctccccgctccatgcagtgggccgttagaaacacgcccagccagagggcc
gcggggagcgctccctccagctcgtcaacacctgctgcgagctctactggcctgatctac
atcgaccccaccaacctgcgacgctccagcgccatcagctcgagtgcggcggctgcggcg
gcggcccttgaggccagcaactccagcagctatctgacatctgccagcagcctggcccgg
gcctacagcatcgtcataaggcagatctctgacctcatgagtctaattcccaagtacaac
caacaagtctacacgcagtaccctgctgctgtgaagctcacctacccggatgctgtcaac
ctgcagaactatgttgaagagaagctgattccaacctggaactggatggtgtcgatcatg
gactccaccgaggctcagctgcgttacggctcggctctgtcatcggctggagacccgggt
caccccagccacccgctccacgcgtcgcagcactctgctcgcagggagcgtataacggcc
cgggaggaggccagcctgcgcacccttgagggacgcaggagagcggctaccttgctgacg
gctcgccagggcatgatgtcggcgcggggcgacttcctgaactacgcgttgtccctcatg
cgttcccacaacgatgagcactccgatgtgcttcctgtgctggacgtgtgctccctgaaa
cacgtggcctacgttttccaggctcttatctactggattaaagccatgaaccagcagacc
acgctagaaaccccacagatggacaggaagagtattgttaatccacttgttttaaggaat
cgagagattttggagctgggtttggacaatgaggattctgaacacgagaacgatgacgac
accaatcagagttcaactctccaggacaaggatgaggatccagtcccggctgagatgggt
cagaaccaccccttcttccgtcgctctgactcaatgaccttcctgggttgcattccaccc
aacccgttcgatgttcccctggctgaagccatcccactggcagaccagccccacctccta
cagcctaatgccaggaaggaggatctgttcggtcggccctctcagggcttgtactcgtcc
tcctatatggcaaccaaaggcctggctgagacaaacatggacaggaactgcctggaggta
aacatgggctcctctctaccctcccactctcagatcctgcccaccaagatgtcttactca
gccaacctgaagaatgttatgagtatggaaaccagccagcggagcactgagaacgagcca
ctagcagagcaggagcttgaggcttcaaaacctggcccttcgccccacgacctcgccgcc
cagctgaagagcagcctacttgctgagattggactcactgaaagtgatggacctcctctc
tcaacattcagacctcactgtagtttcatggggatgatgatctctcatgacatgctgctc
ggccgctggcgtttgtcactggagctgttcggtcgcgtcttcatggaggacgtcggagct
gagcccggatcgatcctcacagagctcggtggctttgaggtaaaggaatccaagttccgt
cgggagatggagaagctgaggaacctgcagtcccgtgacctggccctggaggtggaccgg
gatcgagaccagctgatacagcagaccatgcgtcagctcaacacccacttcggcaggcgc
tgcgcaaccacgcctatggctgtgcaccgggtgaaagtcaccttcaaagacgagccgggc
gaaggcagcggcgtggcccgcagcttttacacggccatcgccttggccctcctctcaaac
gacaagctgcccaatctggactgtgttcagagtgtcagcaagggcatgcaggccagcagt
acgtgtcatcacgattacaattcaaatctgatgcagcgcttgagaaaccgagaccgggaa
agagagcggaggagcggcgggcttcgagcgggatctcgtcgagaccgagacagagactcg
aggaggcagctgtccatagacacccggcccttcaggccttcgtcggagggaaaccccagc
gatgagcccgaccccctgcctgcacacagacaagccctgggtgaaaggctctacccacga
gttcacgccatgcaaccggcttttgccagtaaaatcacaggcatgttgctggagctgtcc
cccgcccagctgctgctgctgctcgctagtgaggactctctccgagccagggtggaggag
gccatggagcttctcattgcacatgggagggaaaatggagcggacagcatattggacttg
ggtcttttggaggctccagagaaagcacaacagcaggaaaaccgcaagcgtcatggttca
acgcgcagtgtggtcgacatggagctggacgacccagacgatggggacgacaacgcccct
ctcttctaccagcctggcaaaagaggcttttactcccctcgccccggcaagaacacagaa
gcccggttgaactgcttccgtaacattggcagaatactgggcttatgtctgcttcaaaat
gaactctgtccaatcacgttgaacagacatgtcatcaaagtgctgcttgggaggaaggtg
aactggcatgactttgcattctttgacccggtcatgtacgagagcctgcggcagctgatc
cgccattctcaggccggtgaagcagatgcagtgtttgctgctatggacctcgcctttgcc
attgacctctgcaaagaggaaggagctgggcaggtggagcttctgtccggtggggtcaac
atgccagtgacccctctgaacgtgtacgagtacgtgaggaagtatgctgagcacagaatg
ctggtggtggctgagcagcctctccacgcaatgaggaagggtttgctggatgtgcttccc
aaaaacgccctggaggacctgactgcggaggacttccggctgctggtaaacggctgtgga
gaagtcaatgtccagatgctcattagtttcacctccttcaatgatgaatctggggaaaat
gcagacaaactactgcagtttaaacgctggttttggtccatagtggaaaagatgagcatg
actgagaggcaagatctggtatacttctggacctccagcccgtccctgccagccagcgag
gagggcttccagccgatgccctccatcaccatccggcctccagacgaccagcacctcccc
acggccaacacctgcatctcacgtctctacgtgccactatactcttcaaaacagatactc
aaacagaaactcctgctagccattaagaccaaaaactttggttttgtgtag
DBGET
integrated database retrieval system
