Gasterosteus aculeatus (three-spined stickleback): 120810495
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Entry
120810495 CDS
T07457
Symbol
ascc3
Name
(RefSeq) LOW QUALITY PROTEIN: activating signal cointegrator 1 complex subunit 3
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gat03400
]
120810495 (ascc3)
Enzymes [BR:
gat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
120810495 (ascc3)
DNA repair and recombination proteins [BR:
gat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
120810495 (ascc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
Helicase_PWI
T2SSE
Motif
Other DBs
NCBI-GeneID:
120810495
NCBI-ProteinID:
XP_040021014
LinkDB
All DBs
Position
XX:19332260..19425265
Genome browser
AA seq
2200 aa
AA seq
DB search
MSPPRLTGTLRSFSTVSKKEAFSGQLYDLKTKRLKRRELFAREGLTWKKIYHFCSEHQDK
AQQQAASQQLKSLLLAAKDIVGNEDGQEAIESAAVFLFETFHNKDHVGTEETRAIKQMFG
PFPSSAAEASCACVARLLAPLGDSRVEDFIQALGSRHDPQRGSAFGRNIAFSYECYTLHP
LEDLPCSGVHEEDTSLDFINFFNNQQSEKKASREGRPSSGGALGSGDGGVLRTEVEKYLD
GGNMVSSSQEELSTSLFEMLASHKSDDELQNELFELLGPEGLEMISILLQRRVAIVDSLL
TMPTDRTSLPADMSRLVSGEVTKPTYGCQVTIQSEQEKQMMKLYRREEKRERKRGKGIDD
GDSSDAALTFDPREMRTQREQALLTARREPILSRERVHERVRYPNVYDCYAEATKMPAFV
GGARMLLPEGVRREDCKMYEEVEIPPNQPMATGFEEKPVYISELDEIAQLVFKGMKSLNR
IQSLVFETAYNTNENLFICAPTGAGKTNIAMLTVLHEIHQHLQPGGVIKKDEFKIIYVAP
MKALAAEMTNYFSKRLEPLGITVKELTGDMQLTKGEILRTQMLVTTPEKWDVVTRKSVGD
VALSQIVRLLILDEVHLLHEDRGPVLESLVARTIRQVESTQSMIRILGLSATLPNYLDVA
AFLHVNPYIGLFFFDSRFRPVPLGQTFVGIKSTNKIQQLRDMEEVCYNKVLEQVKAGHQV
MVFVHARNATVRTAMALIEMAKNHGEICCFQSGQGPDYGQCEKQIQRSRNKQMKEMFPEG
FGIHHAGMLRSDRSLMESMFSKGHLKVLVCTATLAWGVNLPAHAVIIKGTQIYDAKRGAL
VDLGILDVMQIFGRAGRPQFDKYGEGTIITTHDKLSHYLTLLTQQNPIESQFLDSLADNL
NAEIALGTVTNVDEAVKWLSYTYLYVRMRANPLAYGINHRAYQMDPSLELYRKELVVESG
RKLDKAKMIRFEERTGYYASTDMGRTASHFYIRYNTMETFNELFNSQRTEADILSIVSKA
EEFDQLKVRDEEMEELEQLLYNYCELPAAGGVENGYGKINVLLQTYISRGEVDSFSLISD
LSYVAQNAARIVRALFEIALRKRWPAMTYRLLTLCKVIDKRLWGFAHPLRQFSNLSHVIL
NRLEEKKLTVDKLKEMKKDEIGHMLHHVNIGLTVKQCVHQIPSITMEANVQPITRTVLRV
RLIVTPDFRWSDQVHGSVGEPWWLWVEDPINDHIYHSEHFLLQKKQVVAGEPQHIVFTIP
IFEPLPSQYYIKVVSDRWLGAEAVCIINFQNLILPERHPPHTELLDLQPLPVTALGNREF
ESLYKFTHFNPIQTQIFHTLYHSDTNVLLGAPTGSGKTIAAEMAMFRVFNMYPASKVVYI
APLKALVRERIEDWKIRIEGQLGKKVVELTGDVTPDMRAIAQADLIVTTPEKWDGVSRSW
QNRSYVQKVAILIIDEIHLLGEDRGPVLEVIVSRTNFISSHTSKTVRVVGLSTALANARD
LADWLGIRQVGLFNFRPSVRPVPLEVHIHGFPGQHYCPRMASMNKPTFQAIRSHSPAKPV
LIFVSSRRQTRLTALDLIAFLATEDNPKQWLHQDEREIEAIIATVRDSNLKLTLAFGIGM
HHAGLHERDRKTVEELFVNCKIQVLIATSTLAWGVNFPAHLVVVKGTEYFDGKSRRYVDY
PITDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLSVLSDHLNAE
IAAGTISSKQDAMDYITWTYFFRRLVMNPSYYSLEDVSHESINKYLSNLVEKGLRELECS
YCIEIKEDDRTIEPLTYGRIASYYYLRHQTIGTFKERLKAELPVHELLSVLTDAEEYAEL
PVRHNEDQLNSQLAQQLPLQVNPHSYDSAHTKTHLLLQAHFSHAPLPCSDYNTDTKTVLD
NTIRICQAMLDVAANEGWLVTAINICNLVQMIIQGRWLHDSSLLTLPHVEQQHLYLFRKW
FNGKGRSHTGGFKLPIEGLPELIAACNGKESVFAAILGQEFHSTQIAQAWSFLSHLPVLE
VDLRVKGWWEQSQEQTERPLPAAGADPKDGSSWLDVHADQEYVLQVSLRRINTGQQRRKQ
DSKAQASRFPKAKDEGWFLIVGEVDRRELLAVKRVGYVRQRTAVSVAFYTPERTGKCIYT
LYLMSDSYLGLDQQYDIPLNVTAASITAQVNTEVSDSKRL
NT seq
6603 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctccgcggctcacaggcaccctgcgctccttctccaccgtgagcaagaaggag
gccttcagcggacagctctacgacctgaagaccaaacgactgaagaggcgggagctgttt
gccagagagggcctgacgtggaaaaagatttaccatttctgctccgagcatcaagacaaa
gctcaacagcaggctgccagtcagcaactgaagagcctccttctggcagccaaggatatc
gtggggaatgaagatggtcaggaggccattgaaagtgccgctgtctttctgttcgagacc
ttccacaacaaggaccacgtgggcacagaggagacccgggccatcaaacagatgttcggc
cccttcccgtcctctgcagctgaagcctcttgtgcgtgtgtagctcggctgctggctcca
ctcggagactccagagtcgaggacttcatccaagccctgggctcgcgtcacgacccccaa
cgaggctctgctttcggacgcaacatcgccttttcgtatgagtgctacacgctgcaccct
ctggaggacctgccctgctctggcgtccacgaggaggacacaagtctggacttcatcaac
ttcttcaacaaccagcagagcgagaaaaaggccagtagggaagggcggcccagctcaggc
ggagctctgggctctggggatggaggcgtgcttagaacagaggtggagaaatatctggat
ggaggcaacatggtctcgtccagccaagaggagctgtccacgtccctctttgagatgctg
gcctcccacaagagtgacgatgagctgcagaacgagctgttcgagctgctgggcccagag
gggctggagatgatctccatcctcctccagagaagggtggccatcgtcgactccctcctc
accatgccaactgacaggaccagcctcccagcagatatgagccggttggtcagtggcgaa
gtgaccaagcccacctatgggtgccaggtgaccatccagtcagagcaggagaagcagatg
atgaagctgtaccgccgggaggagaagagagagcgaaagagaggcaaaggaatagatgac
ggtgactcctcagacgctgctctgacctttgaccccagagagatgcggactcagcgggag
caggccctgttgacggcccggcgggaacctatactgagccgagaaagagtgcatgaacgc
gtccgctaccccaacgtctacgactgctacgcagaggccacgaagatgcccgcctttgta
ggaggagccaggatgctgcttcctgagggagtccgcagagaagactgtaagatgtatgaa
gaggtggagatcccacccaaccaacccatggccaccggctttgaagagaaacccgtctac
atctctgaactcgatgagatcgcccagctggtgttcaaggggatgaagagtctgaacaga
atccagtccctggtctttgagacggcctacaacaccaatgaaaacctcttcatctgcgcc
ccaactggcgccggtaagaccaacatcgccatgctgacggtcctgcacgagatccaccag
cacctgcagccggggggcgtcatcaagaaagatgagttcaagatcatatatgtggctcct
atgaaggccttggcagctgagatgacaaattacttcagtaagcgattggagccactgggc
atcactgttaaagaactcactggagacatgcagttaaccaaaggagagatcctacggaca
cagatgttggtgacgactccggagaagtgggatgtcgtgaccagaaagagtgttggcgat
gtggctctctcccagattgtgcgtctcctaatcttggatgaagtgcacctcctccacgaa
gaccgaggaccggttctggagagcttggtggcccggaccatcagacaggtggaatccacc
cagagtatgatcaggatcctgggactgtcggcaaccttgcccaactacctggacgtggcc
gccttcctgcacgtcaacccctacatcggcctcttcttcttcgacagtcgcttcaggccg
gtgccccttggacagacctttgttggcatcaaatccactaacaagatccagcagctccgt
gacatggaggaggtgtgttacaacaaagttctggagcaggttaaagccggtcatcaggtg
atggtgtttgtccacgctcgtaatgccacagtgagaacggccatggctttgatcgagatg
gccaagaaccacggagaaatatgctgcttccagtcaggccagggtccagactacggccag
tgtgagaaacagatccagcgctccagaaataagcagatgaaggagatgttcccagaaggc
tttgggatccatcatgctggtatgctgcggtctgaccgcagcctgatggagagcatgttc
tccaagggccacctcaaggtgctggtctgtactgccaccctcgcctggggagtcaacctg
ccggcccatgcagtcatcatcaagggcactcagatctacgatgccaagcgcggggccctg
gtggacctgggcatcctggacgtcatgcagatctttgggcgcgccggtcgcccccagttc
gacaagtacggggagggcaccatcatcaccacccacgacaagctgagccactacttgacc
ctgctcacccagcagaaccccatcgagagccagttcctggacagcctggccgacaacctc
aacgccgagattgctctggggactgtcaccaacgtggatgaggcagtgaagtggctcagc
tatacttacctctatgttcgcatgagggccaacccactggcttacggcatcaaccacagg
gcctatcagatggatccctccttggagctgtacaggaaggagcttgttgtggagtcaggc
agaaagctggataaagccaagatgattcgcttcgaggagcggaccggctactatgcctcc
actgacatgggcaggaccgccagccacttctacatcagatacaacaccatggagacgttc
aatgaacttttcaactctcagcggacagaagcagacatcctcagcatcgtgtccaaggcg
gaagagtttgatcagctaaaggtccgtgatgaggagatggaggaactggaacagttgctg
tataactactgtgagctgccggctgcaggtggggtggagaatggatatggcaagatcaac
gttctccttcagacgtacatcagccgtggagaagtggacagcttctccctcatctcagat
ctgtcctatgtggcccagaatgctgctcggatcgtcagggctctgtttgagattgccctc
agaaagcggtggccggccatgacctaccgactgctcaccctctgtaaggtgatcgataag
cggctgtggggctttgcccaccctctccgccagttctccaacctcagccatgttatactc
aaccgcctggaagagaagaagctaactgtggacaaactgaaggaaatgaagaaggatgag
atcggtcacatgctgcaccatgtcaacattggcctaacagtcaaacagtgtgtccaccag
atcccctccatcacgatggaggccaacgttcagccgatcacacgcaccgtcctacgggtg
cgcctcatcgtcacgcccgacttccgctggagcgatcaggtccacggctcggtgggggag
ccgtggtggctgtgggtggaggatcccatcaatgatcacatctaccactctgagcacttc
ctcctgcagaagaaacaggtggtagcaggagagcctcagcacattgtgttcaccatcccc
atctttgagccgctgccctctcagtactacatcaaggtggtgtctgaccgctggctcggg
gccgaggccgtgtgcatcattaacttccagaacctcatcttgcccgagagacaccccccc
cacactgagctgctggacctgcagccgctaccggtgaccgctttggggaaccgggagttt
gagagcctgtacaagttcacccacttcaaccccatccagactcagatcttccacacgctg
tatcacagcgacaccaacgtcctgctgggggcgccaacgggctctggaaaaaccatcgcc
gcagagatggccatgttcagggtcttcaatatgtatcccgcttctaaggtggtgtacatc
gcccctctgaaagccctggtcagagagaggattgaggactggaagatccggattgagggg
cagctggggaagaaagtggtggagctgacgggtgacgtgactccagacatgagagccata
gcgcaggccgacctcatcgtcaccacaccggagaagtgggacggggtgagccgaagctgg
cagaacaggagctacgtccagaaagtagccatcctcatcatcgatgagatccacctgctg
ggtgaggacagaggtcctgtgctggaggtcatcgtgtcacggaccaacttcatctcctcg
cacacatcgaagaccgtccgggtagtcggtctgtccaccgctctggccaacgcccgggac
ctggctgactggctgggaatcagacaggtgggcttgtttaacttccgtccgtctgttcgc
cctgtaccgctggaagttcacatccatggtttcccgggacaacactactgcccccgcatg
gccagcatgaacaagcctaccttccaagcgatccgtagtcactcgccggccaagccggtg
ctgatctttgtctcatcacgacggcaaacccgactcaccgctctggacctcatcgccttc
ctggccacggaggacaaccccaaacagtggctgcaccaggacgagagagagatagaggcg
atcatcgccacggtgcgcgactccaacttgaagctaacgctggcctttgggatcggcatg
catcacgcgggtctgcatgagagggacaggaagacggtggaggagctgtttgtcaactgt
aagatccaggttctgattgccaccagcactctggcttggggggtgaacttccctgctcac
ctggtggtcgttaagggaactgaatactttgatggcaaatccaggcgctacgtggactac
cccattacagatgtcctgcagatgatggggcgagcaggccggcctcagtttgatgaccag
ggcaaagccgttatcctcgtccatgacatcaagaaggacttctacaagaagttcctctat
gagccttttcctgttgagtccagcctcctcagtgtgctgtcagaccatctgaatgctgag
attgctgcaggaaccatctcatccaaacaggatgccatggactacatcacctggacgtac
ttcttcaggcggctggtgatgaacccgagttattacagcctggaagacgtcagccacgag
tccatcaacaagtacctgtccaacctggtggagaaaggcctgcgggagctggagtgctct
tactgcatagagataaaggaggacgatcggaccatcgagccgctgacctacggtcgcatc
gcctcctattactacttgaggcaccagaccatcggcacgtttaaagagcggctgaaggcg
gagctgcccgtccacgagctgctctccgttctgacggatgcagaggagtatgcggagctg
cccgtcagacacaatgaggaccagctgaacagccagctagctcagcagctccccctgcag
gtcaacccccattcctacgacagtgcccacaccaagacccacctgctgctgcaagcccac
tttagccacgccccactgccgtgcagcgactacaacaccgacaccaagacggtgctggac
aacaccatccgaatctgtcaggcaatgctggatgtagcagccaacgaaggctggctcgtc
acggccatcaacatctgtaacctggtgcagatgatcatccagggccgctggctgcacgac
tcctctctcctcacgctgccacatgttgagcaacaacacctctacctgttcaggaaatgg
tttaacgggaaggggaggagccacacgggaggcttcaagttacccattgaaggacttcct
gaactaattgctgcctgcaacgggaaggaaagtgttttcgctgctatccttggtcaagag
tttcattccactcagattgcccaggcctggtccttcctcagtcacctcccagtgctggag
gtggacctgagagtgaagggctggtgggagcagagccaggagcagacggagcgcccgctg
ccagcggcaggagccgaccccaaggacgggagcagctggctggacgtccacgctgaccag
gagtacgtcctgcaggtgtccctgaggcgcatcaacacgggccagcagaggaggaagcag
gacagtaaggcccaggcgtccaggttccccaaggcgaaggacgaaggctggttcctgatc
gtgggcgaggtggaccgcagggagctgctggctgtcaaacgggtgggatacgtgcgccag
cgcacagccgtgtccgtggccttctacacccccgagaggactggaaagtgcatctacact
ctgtacctgatgagtgacagctacctggggctggaccagcagtatgacatccccctgaac
gtgacagcagccagcatcacggctcaggtcaacaccgaggtgtctgactccaaacgtctg
tga
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integrated database retrieval system
