Gasterosteus aculeatus (three-spined stickleback): 120810500
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Entry
120810500 CDS
T07457
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
gat04054
]
120810500
Pattern recognition receptors [BR:
gat04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
120810500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
NOD2_WH
PRY
LRR_6
SPRY
AFG1_ATPase
Alpha-E
LRR_4
Motif
Other DBs
NCBI-GeneID:
120810500
NCBI-ProteinID:
XP_040021019
LinkDB
All DBs
Position
XX:complement(212592..219717)
Genome browser
AA seq
1029 aa
AA seq
DB search
MFLHREDQESSEVTSAQQHQTHLDSIFMLLEENLLTFVKNELKKIQKIVSSDYPECSEKE
VEEVLDEEQRRSREAFVKISVHFLKRMKQEELAERLQSRLLPADCQRELKSNLKKKFQCV
FEGIAEAGNPTLLNEIYTELYITEGATAEVNQEHEVRQIETASRKPARPETTIRREDLFE
PSAGGEEPIRTVMTKGVAGIGKTVLTQKFTLDWAEDKDHQDIQFTFPFTFRELNVLRGKK
FSLVGLVHHFFSETRAAGICRFEKFQVVFIFDGLDECRLPLDFHNNEVLTDVTEISSVDV
LLTNLIRGKLLPSARLWITTRPAAANQIPPECVDMVTEVRGFTDPQKEKYFMKRFRDKKQ
ASRIISHIKTSRSLHIMCHIPVFCWITATVLEEMKTKDEGELPKTLTEMYIHFLVVQSKV
KKVKYDGGAETDPHWSPESRKMIESLGKLAFDQLQKNNLIFYESDLRECGIDITEASVYS
GVFTQIFREERGLYQDKVFCFVHLSVQEFLAALHVHLTFFSSGVNLLSEEQTTSCRSKRY
KPNPEPTRLYQSAVDEALQSPNGHLDLFLRFLLGLSQEANQTLLRGLLTQTGSHSQTNQE
TVQYIKEKISENVSPEKSINLFHCLNELNDGSLVEEIQQSLRSGRFSREELSPAHWSALV
FILLSSGEDLEVFDLKKYSASEEALLRLLPVVKVSNKVLLSDCNLSERSCEALSSVLSSQ
SSSLRELDLSYNGLQNSGVKLLSAGLESPHCGLETLRLSGCLITEEGVASLTSALSSNPS
HLKELDLSYNHPGDSGVKLLSAGLEYPHWRLETLRVEPAGVRWFRPGLRKYSCELTIDTN
TVNRNLKLSDNNRKVTCEEEDHSYPDHPDRFDCYPQLLCRTGLTGRCYWEVEWSGYVNLS
VSYRGIGRKGKGLDCRFGMNDQSWCLRCSDEGYSVRHNKIRTLITSISSISSSSSGRVAV
YVDWPAGSLSFYRVSSDTLIHLHTFSTTFTEPLYPGVLFWYSSGSSMSLCSLQEGESPPG
GEASSLLTT
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgttcctccacagagaggaccaggagagctcagaggttacgtctgcccagcagcatcaa
acacacctggactccatcttcatgctgctggaggagaacctcctcacttttgtgaagaac
gagctgaagaagatccagaagattgtgagttcagattacccagaatgctcagagaaggag
gttgaggaggtgctggatgaagagcagaggaggagcagagaggcatttgtcaagatctca
gtgcacttcctgaagagaatgaagcaggaggagctggctgagcgtctgcagagcagactt
cttcctgcagattgtcagcgtgaactcaaatccaacctgaagaagaagttccagtgtgtg
tttgaggggatcgctgaagcaggaaacccaacccttctgaatgagatctacacagagctc
tacatcacagagggagcgactgcagaggtcaatcaagaacatgaggtcagacagattgaa
acagcatcaaggaaaccagccagaccagaaacaaccatcagacgagaagacctctttgaa
ccctcagctggaggagaggaaccgatcagaacagtgatgactaagggagtggctggcatt
gggaaaacagtcttaacacagaagttcactttggactgggctgaagacaaagaccaccag
gacatacagttcacatttccattcaccttcagggagctgaatgtgctgagagggaagaag
ttcagcttggtgggacttgttcatcacttcttcagtgaaaccagagcagcaggaatctgc
aggtttgagaagttccaggttgtgttcatctttgacggtctggatgagtgtcgacttcct
ctggacttccacaacaatgaggtcctgactgatgtcacagagatctcctcagtggatgtg
ctcctcacaaacctcatcagggggaagctgcttccctctgctcgcctctggatcaccaca
cgacctgcagcagccaatcagatccctcctgagtgtgttgacatggtgacagaggtcaga
gggttcactgacccccagaaggagaagtacttcatgaagaggttcagagataagaagcag
gccagcaggatcatctctcacatcaagacctcacgaagcctccacatcatgtgccacatc
cctgtcttctgctggatcactgcaacagttctggaggagatgaagaccaaagatgaagga
gagctgcccaagaccctgactgagatgtacatccacttcctggtggttcagtccaaagtg
aagaaggtcaagtacgatggaggagctgagacggatccacactggagtccagagagcagg
aagatgatcgagtctctgggaaaactggcctttgatcagctgcagaaaaacaacttgatc
ttctatgaatccgacctgagagagtgtggcatcgatatcacagaagcctcagtgtactca
ggagtattcactcagatctttagagaggagagaggactgtaccaggacaaggtgttctgc
ttcgtccatctgagtgttcaagagtttctggctgctcttcatgtccatctgaccttcttc
agctctggtgtcaatctgctgtcagaagaacaaacaacctcctgccggtctaaacgctat
aaacccaatcctgaaccaacacgtctctaccagagtgctgtggacgaggccttacagagt
cctaatggacacctggacttgttcctccgcttcctcctgggtctttcccaggaggccaat
cagactctcctgcgaggtctgctgacacagacaggaagccactcacagaccaatcaggag
acagtccagtacatcaaggagaagattagtgagaatgtgtctccagaaaaaagcatcaat
ctgttccactgtctgaatgaactgaatgatggttccctagtggaggagatccaacagtcc
cttagatcaggacgtttctcccgcgaggaactgtctcctgctcattggtcagctctggtc
ttcatcttactgtcatcaggagaagatctggaggtgtttgacctgaagaaatactctgct
tcagaggaggctcttctgaggctgctgccagtggtcaaagtctccaacaaagttctactg
agtgactgtaacctctcagagagaagctgtgaagctctgtcctcagtcctcagctcccag
tcctctagtctgagagagctggatctgagctacaatggcctgcagaattcaggagtgaag
ctgctgtctgctggactggagagtccacactgtggcctggagacgctcaggctgtcagga
tgtctgatcacagaggaaggcgttgcttctctgacctcagctctgagctccaacccctcc
catctgaaagagctggacctgagctacaatcatccaggagactcaggagtgaagctgctg
tctgctggactggagtatcctcactggagactggagactctcagggtggagcctgctgga
gtccgatggttcagacctggtctgaggaagtattcctgtgaactcacaatcgacacaaac
acagtaaatagaaacctcaaactgtctgacaacaacaggaaggtgacatgtgaggaggag
gatcactcgtatcctgatcatccagacagatttgactgctatcctcagctgctgtgtaga
actggtctgactggtcgctgttactgggaggtcgagtggagcggatacgttaatctatca
gtgagttacagaggaatcgggaggaaaggaaaaggtttagactgtcgttttggaatgaat
gatcagtcctggtgtctgagatgctctgatgaaggttactctgtccgtcacaataagata
agaacactcattacctccatctcctccatctcctcctcctcctctggtagagtagcagtg
tatgtggactggcctgctggctctctgtccttctacagagtctcctctgacacactgatc
cacctccacaccttcagcaccacattcactgaacctctttatcctggggtcttgttctgg
tacagttctggttcctcaatgtctttgtgttccctgcaggagggagagtctcctcctggt
ggagaagcttcctctctgctcaccacatag
DBGET
integrated database retrieval system
