Gasterosteus aculeatus (three-spined stickleback): 120810501
Help
Entry
120810501 CDS
T07457
Name
(RefSeq) LOW QUALITY PROTEIN: NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
gat04054
]
120810501
Pattern recognition receptors [BR:
gat04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
120810501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
NOD2_WH
PRY
SPRY
LRR_6
LRR_4
AFG1_ATPase
Motif
Other DBs
NCBI-GeneID:
120810501
NCBI-ProteinID:
XP_040021020
LinkDB
All DBs
Position
XX:complement(230424..240407)
Genome browser
AA seq
983 aa
AA seq
DB search
MLLEENILTFVKNELKKIQKIVGSDYPECSEKEVGEVLDEEQMRSREAFKKISVHFLRRM
KQEELADRLQSRLLPADCQRELKSNLKKKFQCVFEGSLKAGNPPLLNEMYTELYITEGGT
ADVNQEHEVRQIETASRRPAQTETTIRREDLFEPSAGGEEPIRTVMTKGVAGIGKTVLTQ
KFTLDWAEDKDHQDIQFTFPFTFRELNVLREKKFSLVGLVHHFFSETRAAGICRFEKFQV
VFIFDGLDECRLPLDFHNNEILTDVTESASVDVLLTNLIGGKLLPSARLWITTRPAAANQ
IPPECVGMVTEVRGFTDPQKEKYFRKRFRDKKQASRIISHIKTSRSLHIMCHIPVFCWIT
ATVLEEMKTRDGGELPKTLTEMYIHFLVVQSKVKKVKYDGGAETDPHWSPESRKMIESLG
KLAFDQLQKGNLIFYESDLTECGIDIRAASVYSGVFTQIFREERGLYQDKVFCFVHLSVQ
EFLAALHVHLTFFSSGVNLLSEEQTTSLVSKGFKPNPEPKRLYQSAVDEALQSPNGHLDL
FLRFLLGLSLETNQTLLRGLLTQTGSLSQTNQRTVQYIKEKISENVSPEKSINLFHCLNE
LNDGSLVEEIQQSLRSGRLSTDKLSPAQWSALVFILLSSGEDLEVFDLKKYSASEEALLR
LLPVVKASNKVLLSDCNLSERSCEALSSVLSSQSSSLRELDLSYNGLQDSGVKLLSAALE
SPHCDLETLRLSGCLITEEGFSSLASALSSNPSHLRELDLSYNHPGDSGVKLLSAGLEDP
HWRLETLRVEPAGVRWFRPGLRKYSCELTIDTNTVNRGLKLSDNNRKVTRVMEYQSYPDH
PDRFVSYHQLLCRTGLTGRCYWEVEWSGKVYVSVSYRGIGRKGNSDDCWFGMNDQSWCLR
CSDEGYSVFHNKTRTPITSSSSSSSGRVAVYVDCPAGSLSFYRVSSDTLIHLHTFSTTFT
EPLYPGFWFCSGSSVSLCSLQEG
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgctgctggaggagaacatcctcacttttgtgaagaacgagctgaagaagatccagaag
attgtgggttcagattatccagaatgctcagagaaggaggttggggaggtgctggatgaa
gagcagatgaggagcagagaggcatttaagaagatctcagtgcacttcctgaggagaatg
aagcaggaggagctggctgaccgtctgcagagcagacttcttcctgcagattgtcagcgt
gaactcaaatccaacctgaagaagaagttccagtgtgtgtttgagggatcgcttaaagca
ggaaacccaccccttctgaatgagatgtacacagagctctacatcacagagggagggact
gcagacgtcaatcaagaacatgaggtcagacagattgaaacagcatccagaagaccagcc
cagaccgaaacgaccatcagacgagaagacctctttgaaccctcagctggaggagaggaa
ccaatcagaaccgtgatgactaagggagtggctggcattgggaaaacagtcttaacacag
aagttcactctggactgggctgaagacaaagaccaccaggacatacagttcacatttcca
ttcaccttcagagagctgaatgtgctgagagagaagaagttcagcttggtgggacttgtt
catcacttcttcagtgaaaccagagcagcaggaatctgcaggtttgagaagttccaggtt
gtgttcatctttgacggtctggatgagtgtcgacttcctctggacttccacaacaatgag
atcctgactgatgtcacagagtcggcctcagtggatgtgctcctcacaaacctcatcggg
gggaagctgcttccctctgctcgcctctggatcaccacacgacctgcagcagccaatcag
atccctcctgagtgtgttggcatggtgacagaggtcagagggttcaccgacccccagaag
gagaagtacttcaggaagaggttcagagataagaagcaggccagcaggatcatctctcac
atcaagacctcacgaagcctccacatcatgtgccacatcccagtcttctgctggatcact
gcgacagttctggaggagatgaagaccagagatggaggagagctgcccaagaccctgact
gagatgtacatccacttcctggtggttcagtccaaagtgaagaaggtcaagtacgatgga
ggagctgagacggatccacactggagtccagagagcaggaagatgatcgagtctctggga
aaactggcctttgatcagctgcagaaaggcaacctgatcttctatgaatccgacctgaca
gagtgtggcatcgatatcagagcagcctcggtgtactcaggagtgttcactcagatcttt
agagaggagagaggactgtaccaggacaaggtgttctgcttcgtccatctgagtgttcag
gagtttctggctgctcttcatgtccatctgaccttcttcagctctggtgtcaatctgctg
tcagaagaacaaacaacatccctggtgtctaaaggctttaaacccaatcctgaaccaaag
cgtctctaccagagtgctgtggacgaggccttacagagtcctaatggacacctggacttg
ttcctccgtttcctcctgggtctttccctggagaccaatcagactctcctgcgaggtctg
cttacacagacaggaagtctctcacagaccaatcagagaacagtccagtacatcaaggag
aagatcagtgagaatgtgtctccagagaaaagcatcaatctgttccactgtctgaatgaa
ctgaatgatggttccctagtggaggagatccaacagtcccttagatcaggacgtctctcc
acagataaactgtctcctgctcagtggtcagctctggtcttcatcttactgtcatcagga
gaagatctggaggtgtttgacctgaagaaatactctgcttcagaggaggctcttctgagg
ctgctgccagtggtcaaagcctccaacaaagttctactgagtgactgtaacctctcagag
agaagctgtgaagctctgtcctcagtcctcagctcccagtcctctagtctgagagaactg
gatctgagctacaacggcctgcaggactcaggagtgaagctcttgtctgcagcactggag
agtccacactgtgatctggagactctcaggctgtcaggctgtctgatcacagaggaaggc
ttttcttctctggcctcagctctgagctccaacccctcccatctgagagagctggacctg
agctacaatcatccaggagactcaggagtgaagctgctgtctgctggactggaggatcca
cactggagactggagactctcagggtggagcctgctggagtccgatggttcagaccaggt
ctgaggaagtattcttgtgaactcacaatcgacacaaacacagtaaatagaggactcaaa
ctgtctgacaacaacaggaaggtgacacgtgtgatggagtatcagtcatatcctgatcat
ccagacagatttgtctcctatcatcagctgctgtgtagaactggtctgactggtcgctgt
tactgggaggtcgagtggagcggaaaagtttatgtatcagtgagttaccgaggaatcggg
aggaaaggaaacagtgatgactgttggtttggaatgaatgatcagtcctggtgtctgaga
tgctctgatgaaggttactcggtctttcacaataagacaagaacacccatcacctcctcc
tcctcctcctcctctggtagagtagcagtgtatgtggactgtcctgctggctctctgtcc
ttctacagagtctcctctgacactctgatccacctccacaccttcagcaccacattcact
gaaccgctttatcctgggttctggttctgttctggttcctcagtgtctctgtgttctctg
caggaggga
DBGET
integrated database retrieval system
