Gasterosteus aculeatus (three-spined stickleback): 120810784
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Entry
120810784 CDS
T07457
Symbol
rorc
Name
(RefSeq) nuclear receptor ROR-alpha A isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gat03000
]
120810784 (rorc)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
gat03310
]
120810784 (rorc)
Transcription factors [BR:
gat03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
120810784 (rorc)
Nuclear receptors [BR:
gat03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
120810784 (rorc)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
120810784
NCBI-ProteinID:
XP_040021577
UniProt:
A0AAQ4RKV0
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Position
XX:6121411..6136331
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AA seq
533 aa
AA seq
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MAHAHVFKRLHGAKQATRCFDGRVMEYEEHDVPPAGSPLKRGGVVSKKTQLTEIEVIPCK
ICGDKSSGVHYGVITCEGCKGFFRRSQLPTVSYSCSRQSNCPIDRTSRNRCQHCRLQKCL
MKGMSRDAVKFGRMSKRQRDSLNAEVERHRQQQQQQQQQQQQCQGDAQSLLSLPSKVRQD
RSPQLLHSVASAYSFTREAELLSYTADVHPYLVCSPSESQVSGMIYRGSGGPPTSRSLAR
LDNGAHLDIRGYESRQPSHDLAGIHPYNPLEDPFSLYPHSLRNTDELCASIVRSHRETSQ
YRVEELLALRWKLLSREEIQAYQSKSVDEMWQYCAIRLTDAVQYVVEFAKHIPGFRLLSQ
NDQIALLKTGSMEVVLVRMSRFFNTENSTVFFDGKFAGVEVFKSLACGDLITAVFDFAHG
MCDLKLTEPQIALFSALVLINTDRPCLEDRGRVQQVQKSVESGLTHILRRDNQESLMYKL
NQRMSVLRSLCSLHMEKLRVFSQRYPLTAHSLFPPLYKELFASEAELLPGTTQ
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggcgcacgcgcacgttttcaaacgcctgcacggagccaaacaggccacccgctgcttt
gacgggagagtaatggagtatgaggagcacgacgtgccccccgctggcagccccctcaaa
agaggaggagttgtgtccaagaagactcaattgaccgagattgaggtcatcccgtgtaag
atctgcggtgacaagtcttctggggtgcattatggagtcatcacctgtgagggctgcaag
ggatttttccggcgcagtcagctacccaccgtgtcctactcctgctccaggcagagcaac
tgtcccatcgaccggaccagccgcaaccgctgccaacactgccgtctgcagaagtgcttg
atgaagggcatgagcagagatgctgtgaagttcggacgaatgtctaaacgtcagcgggac
tctctaaatgccgaggtggagcgacatcggcaacagcagcagcagcagcagcagcagcag
cagcaatgtcagggagacgcccagtctctcttatccttaccttccaaggtccgtcaagac
cgctcgccacagctccttcattccgtggcctccgcctactccttcaccagggaggccgag
ctgctgtcctacaccgccgatgtccacccttacctggtgtgctccccgagcgagtcgcag
gtgtcgggtatgatctaccgaggctccggtgggcctcccacatcgagatccctggccagg
ttggacaacggtgcacaccttgacataagagggtacgaatccaggcagccgtcgcatgat
ctcgcaggaattcacccctacaaccctctggaggatcctttcagcctctatcctcactct
ctgaggaatacagatgagctgtgcgccagcatagtgcgttcccacagggaaaccagccag
tacagagtggaggagctgctggccctcagatggaagctcctcagcagagaggagatccag
gcctaccagagcaaatcggtggatgagatgtggcagtactgtgccatccggctaacggat
gccgtgcagtatgtggtggagtttgcgaaacacatcccaggtttccgcttgctcagccag
aacgaccagatcgctctcctgaagaccggctccatggaggtggttctggtcaggatgagt
cgcttcttcaacacagagaacagcaccgtcttctttgacgggaaatttgctggagtggaa
gtcttcaagtctttggcgtgcggtgatctaatcacggcagtgtttgactttgcccacggt
atgtgtgatctcaagctcacggagccgcagattgctctcttcagtgctctcgtgctgatc
aacacggatcgtccttgtctggaggacagaggcagagttcagcaagtgcaaaaaagcgtt
gagtctggactcacacacattctacgccgagacaaccaagagagtctaatgtacaagctc
aaccagaggatgtcagtgttgcgttcgctctgcagtctgcacatggagaagctgcgcgtc
ttcagtcagcgttacccgctcactgctcactctctcttccctccgctctacaaggagctc
ttcgcctctgaggcggagctgctgcccggcaccacccagtga
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