Gasterosteus aculeatus (three-spined stickleback): 120810790
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Entry
120810790 CDS
T07457
Symbol
cicb
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gat03000
]
120810790 (cicb)
Transcription factors [BR:
gat03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
120810790 (cicb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_Cic_C
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
120810790
NCBI-ProteinID:
XP_040021599
LinkDB
All DBs
Position
XX:8374616..8405801
Genome browser
AA seq
2752 aa
AA seq
DB search
MRPLKKQRGRSPPLTRGRGGRRRGSSQPLQEKDPKRAKRETLVKTTQHSPSAPTSKQISH
SVEEPITNSGTPKRAEPTGLRKPVESVERKAAEKTETEKIDGTNGNKAVSCNSIAFPTTT
PTPLSTATPPPANNHSLGSVSSRKTATFKARVPKKKYTYEHFANNASSLTTIPTSSPALI
HSSYHNAHSKISDSLSTPNNNFKSSNSISQSSNKSIHFSINSSGNSNTTSGIDIVTNRSS
HNTLIDSSNSNNCSGNQPSVLIVDSKAPDGNYVVSGDDKTFRAAGSQDKDFQPGKDKSEG
ARYSVRSSSTDTASEHSADLDGMEATGPCLPQKNPRCPAALHQPHKEARRSEGLAEALAK
GMRNQRVLARRLKTTTESGVGSTGNRGLEESESRPLSPVFRPGVVRRVSGGTVEVQLQGE
ETLVGYPFRGGTAMTSSPGAESPVEFILDAPPPGTAPVAVRTRVCVPFGGEEGGPPLYRE
GIVTQVDPHPGVSFPYQVLFSEDWESLDGAHGGEEKRKANANSQAVWVSRQSLRLLTPPW
EVPHLDGGRAQEREREREREERERREEMEVEREVCQLSIGMGVLGGGARVSHGFEGVAGG
HPYGSTHPPPRSSTGNATSVVACGSGGGSQPNTPEEDVEVSRLNMALAVGAKANAGNSQH
RNIASKSLCYPSSSPHLPAVQVLAPPHLSTLPSPHPPRSPASIGSEINRTTPSLPPLKST
PTQTPTPTSGVGSSSTSSRSRTPLSLAQQKYKKGDVVCTPNGIRKKFNGKQWRRLCSREG
CMKESQRRGYCSRHLSMRTKEMETAAGGGGGSSSGTVTPDLRGRASSEFEWDDTSRESSE
TSSRGDSRPRLVLPSLLPHDLSSRFDFDECEAATMLVSLGSSHSGTPSFSPISTQSPFSP
APSPSPSPLFGFRPANFSPITASPVLQPRRHRQPSGTGGGAAGGSKAATQAGGGERERHS
SGMQPSFHSNLMFTVPMSPSKRKPDALPPPPLPSHHHDYTPKTEPEQGDLNGSFRVLSPH
VQASLSRTHTPTFSRPRGVSTLSSSRPPSSTAVSPPPLLVSPTPPSPLTPDGGPRRLVPG
SQQALRDSPVIVRNPEVPLAKFTACPLERGGGGGGDLGGTDKTLFKDTGLAPLTPQPIAG
LQVPVPINAATAVANGTVLLRSPGQTLVLVSPTPSSVPTAATPAPPLQPLSVVVGTTVAA
AAPSGADGSVEREENGGTGFGGEVQQPVPCHPSPTALLPLILPAESLHPVPRKDIIMGRP
GTVWTNVEPRSVPVFPWHSLVPFLAPTQSDASSQPGEGQHPVNHPQAASLKTEGQGVASL
SQQPAEAPPTVERGPPSRPPPSSDELPPEEEKGDAERERPESETESDVDDLFLPGVVPEQ
PISTSPVKRRTQSLSALPKDGDRSCPGKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQD
NRTVSKILGEWWYALGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSSSDGRGVPG
GKDIRERSMSESTEPHSVELKGAGPGLVGVSERNTGEGLVGQLTRPRAFSQSAVHSLEHS
DRGNTQALAELTQMCGDGGSKFSGHAPPLSQSQRGVSEDMTSDEERMVICEEEGDDDVIE
DPYPSTSIDLKCKERVTDSDSENGSGDESNRKRIFAPVICSSASSSSSSHHTSHGRSVSL
SSYPSSKRYDEGRSGGGGFSDHRRKDRGEGETRDTFGAAAGGAAAAAAAAAAAAAAGGGG
GGGGGGGGGVVQATSLSLTSGSSVISTSAAGGYPSSSAGALGVNPLPGIGAVRVASTVVT
NVMRPVISTPLPIASKSREGGTSSPHPPERKSLTLHQQPQFVIGSGPGGGVSGTGGGYYS
SSSPNPLGAGIGSGGVVTNLVLGGALSAQPAVQLITPSHHHHPSQQQAFSSSAVSVSHSQ
TNGPLPLSLLHPQFLPTSSLASPGGKAITQVQYILPTLPANTNPNSPPQQLSQPTGIFNL
PTAPPTHMSLANGRQQGIGSLTGYSSSSAVGVVSPAARVQTQSPVLQGKMIVPMATVRTA
PAPAQQVPVMAPTLPVQNGAQAGGKIIQIAPMPVVQSHLSHGGTVHPASPFPRTVGTTAV
VSPGSAPSQAVLLPPAPTRITYVQSTPGVPSTLPLVSTTSVSSIGQQPLPVHGSAYVQSP
LATLGFTAIGPPGQTLVQPLIAGQPPLLATAPSSQPSISAPAPGSGGQAVTAIYPPSPNV
TMATGVVSMTAVPPSVVYSISGPSTVSSHILSKHTVTPSTITHSHPQPQPDRQADRHPPP
DRPPDRQTDRPAGGQTELMTHSDRHLERQTSASVSSVAPSGGSVVSTRSCSPLPIQTPGS
TPGTPKLTQLPVRTPQKVKATLANIPVGSYEGGGRGKEREREREREKERVAAATSRFSFD
AEPAGQTGPPSTHPAEGPPSSSSSSSSSDRPLEGCSAAESFDAQHRESTTTKEAGWKESL
PSSPPPPPSATEPPLPPPQADKDGPPAKKVKARPPPLKKTFESVDKSGRVLSEVYFEERF
AELPEFRPEEVLPSPTLQSLATSPRAILGSYRRKRKNSTDLDSATDEQVSPKRKSRRRSS
CSSEPNTPKSAAKCEGDIFTFDRAATDGEDILTDLEFDKVPYSSLRRTLDQRRALVMQLF
QEQGFFPSAQATAAFQARYSDIFPTKVCLQLKIREVRQKIMQTAAPSDVSAFGIPDSLGS
LPGPSSSQSGEGALKGGGDLQDDDVEQGAEGSPEDLRDSQESSRRGMLTNLN
NT seq
8259 nt
NT seq
+upstream
nt +downstream
nt
atgaggccattaaagaagcagcgaggccgttctcccccgctgaccagaggtcgagggggg
agacggagaggaagctctcagccccttcaagagaaggaccccaaaagagccaagagggaa
acactcgtcaagaccacacagcattcacccagcgctccaacaagcaaacagatatcgcac
tccgtcgaagagccgatcacaaacagcggtactcccaagagagcggagcctactggactg
aggaaacctgtggaatcggtcgagagaaaagcagcagaaaagacagaaacagaaaagata
gacggcacgaacggaaataaggccgtgtcctgtaactctatagcatttcctaccaccacc
ccaacgccactctccacagccacgccccctccggccaacaatcacagcttaggctcagtc
tctagtaggaaaacagccacatttaaggctcgtgtgcccaagaagaaatacacgtatgag
cactttgcaaacaacgcaagtagcctgactaccattcctacctccagccctgcacttata
cacagcagttaccacaatgctcacagcaaaatcagcgatagtttgagtacacccaataac
aatttcaagagtagtaacagtattagtcaaagcagtaataaaagtattcattttagtatc
aatagtagtggtaatagtaacactaccagtggtattgacattgtgactaaccgtagtagc
cataatactcttatagatagcagtaatagtaataattgctcaggtaatcagccatcagtg
ctaattgtggacagcaaagctccagacggaaactacgttgtttccggggacgataaaacc
ttcagggcggcaggatcccaggacaaagatttccaacctgggaaagataagtcggagggg
gcccgttactcagtgcgctcctcctccacggatactgcgagcgagcactccgctgacctg
gacgggatggaagcaacaggaccgtgcctgcctcaaaagaacccccgctgcccagccgct
ctccaccagccgcacaaagaggccaggcgttcagagggactggctgaagctttggccaag
ggcatgaggaaccagagagtccttgctcgccggttaaagacgaccacggagagcggggtc
gggtccacgggcaaccgagggttggaggagagtgaatcacggcctctatccccggtgttc
aggccaggggtggtgcgcagggtgagtggagggactgtagaagtgcagctccaaggagag
gagacccttgttggatacccgttccgtggcgggaccgcgatgacatcgtcacctggagcc
gagagcccggtggagttcattctggacgcccccccgcctggcacggcacccgtggcagtg
aggacccgagtatgcgttcccttcggtggagaggagggtggtcctccgctgtacagagaa
ggcattgtcacccaggtggacccccaccctggcgtgtcctttccttaccaggtgctcttc
agtgaagactgggagtctctggacggcgcccatgggggggaagagaaaaggaaagctaac
gccaattctcaggccgtgtgggtgtcccgacaaagtctgaggctgctcacccctccctgg
gaggtcccacacctggatggtgggagggcccaggaaagagagcgcgagagggagagggag
gagagggagcgcagggaggagatggaggtggagagggaagtgtgccagttgagcattggg
atgggcgtgctgggagggggagcaagggtgagccatggctttgaaggagtggccgggggg
catccctatggaagcacacatccgccaccccgttcctccactggtaacgccacttctgtc
gtggcctgcgggtcgggcggagggagccagccgaacaccccggaagaggatgtcgaggtc
tctcgtttgaacatggcgctcgccgtcggcgccaaggcaaacgccgggaactcccagcac
agaaacatcgcctccaagtccctctgctacccctcctcctctccccacctgcctgcggtg
caggttctggcgcccccccatctctccaccctgccgagcccccatccgccccggtcccct
gcctcaatcgggtctgagattaacagaaccactccgagcctacctcctttgaagtccact
cccactcagacccctactcccacttccggtgtggggtcctcctctacctcctctcgctcc
aggacccccctctcgttggctcagcagaaatacaagaagggcgacgtggtgtgcacaccc
aatggaatccgtaagaagttcaacggtaagcagtggaggaggctgtgctccagggaaggc
tgcatgaaggagtctcagcgtcgaggatactgctcaagacacttgtccatgaggaccaaa
gagatggagacggcggcagggggcggaggaggcagcagctcagggaccgtcacccctgac
ctgcgggggagggcgagcagtgagtttgagtgggacgacacgtcaagggagagcagcgag
actagtagcagaggagactccagaccccgcctggtcctcccttccctcctcccccacgac
ctgtcgtcgcgctttgactttgacgagtgcgaggccgccaccatgcttgtgtcgctgggg
agctcgcactccggcaccccctccttctcgcccatctccacccagtcgcccttctccccc
gccccgtctccctcgccctccccgctgttcggcttcaggcccgccaacttctccccgatc
accgcctccccggtcctgcaaccccgaaggcacaggcagcccagcgggacaggggggggt
gcggccgggggcagcaaagcagcgacccaggccggaggaggagaaagggagagacactcg
tcgggtatgcagccctccttccacagcaacctgatgttcacggtccccatgagccccagc
aaacgaaagcccgacgctcttcctccgccgcccctcccctcgcaccaccacgactacacg
cccaagacagagccggagcagggggacctgaacggctcttttagggtgctgtccccccac
gtccaggcctcactgtcccgcacgcacacgcccaccttctctagacccagaggagtcagc
accctctcgtccagtaggccaccgtcctccaccgccgtctccccccctcctctgctggta
tctccgactcccccttcccctctcactcccgatggagggcctcgccgcctggttcctggg
tcccagcaggccttgcgggactcccccgtcattgtgaggaatccggaagtcccgctggca
aaattcacggcgtgtcccttagaaagaggaggaggaggtggtggagacttgggggggacg
gataagaccttgtttaaagacaccggcttagcacccctcaccccgcagccaattgctggc
ctccaggttcccgtccccataaacgctgcaaccgcagtagccaatggcaccgtcctcttg
cggagcccgggccaaacattagtgcttgtgtccccgactccgtcctctgtccccaccgct
gccacccctgctccccctctgcagcccctgtcagttgtcgtcggcacaacggtcgcagct
gccgctccgagtggcgcggacggctcggtggagcgggaggagaatggggggacggggttc
gggggtgaggtccagcagccggttccgtgtcacccgtctcccaccgctctgctgccactg
atcctcccagccgaaagccttcaccccgtcccacggaaggacatcatcatgggacgccct
ggcacagtatggaccaacgtagagccccggtcagttccggtcttcccctggcattcgttg
gtccctttcctggcacccactcaatcggatgcttcttctcagccaggagagggtcagcac
ccagtcaaccacccccaggcagccagtctgaagacagagggccagggggtggcttcgctg
tcacagcagcctgcagaggcacctcctaccgtagagcgaggtcctccgtcccggcctcct
ccctcttccgatgagctgcctccagaggaggagaaaggcgacgcagagagggagaggcct
gaaagcgagacagagagtgatgttgatgacctcttcctcccaggagttgtaccggagcag
cccatctctacatcaccagtaaagagacgcacccagtccctcagcgcgttgcccaaagac
ggagataggagctgccctggaaagagagagaaggaccacatccgacgaccaatgaatgca
ttcatgatttttagtaagcgccatcgagcattggtgcaccagcggcacccgaaccaggac
aacaggaccgtcagcaagattctcggagagtggtggtatgctcttggaccaaaggagaaa
cagaaataccatgatttggcgttccaggtaaaagaggctcactttaaagctcacccagac
tggaagtggtgtaacaaagacaggaagaagtccagctcagatggccgtggagttccaggg
ggcaaagacatcagggagaggagcatgtctgagtccacagagccccattctgtggagcta
aagggtgctggtccaggtctggtgggcgtatctgagaggaacacaggggaaggtcttgtg
ggccagcttacccgtcccagagccttctcccaaagtgccgtgcacagcctggagcacagt
gacaggggaaacacacaggcccttgcagaactgacacagatgtgtggggatggcggcagt
aagttttcgggtcatgctccgcccctgtcccaatcccagaggggggtcagcgaggacatg
accagtgacgaggagcgcatggtcatctgtgaagaggagggagatgatgatgtcattgag
gacccttatccgagcacttccatagacctcaagtgtaaggagcgggtgacggacagcgat
agtgagaacggttctggagacgaaagcaatcggaagcggatttttgctccagtcatttgc
tcctctgcgtcatcatcgtcttcctcacaccacacctctcatggcagaagtgtctctctg
tcctcttacccaagcagcaagcgttacgatgaagggagatcaggaggggggggattttca
gatcacaggaggaaggacagaggagagggagagactagagatacatttggagcagcagca
ggaggagcagcagcagcagcagcagcagcagcagcagcagcagcagcaggaggaggagga
ggaggaggaggaggaggaggaggaggagtagtgcaagccacatctctctccctcacttct
ggttcgtcagtcatctccacttctgcagctggagggtatccatcctcatcagcaggtgcc
ctgggggtaaaccccctcccggggattggcgctgtaagggtggcctccacggtggtgacc
aatgtaatgcgtcctgttatcagcacgcccctcccaatcgccagcaaatccagagaagga
gggacatcaagcccacatccgccagagaggaagtcgctaactctccatcagcagccacaa
tttgtgatcggttcaggaccaggaggaggagtttcggggacagggggtgggtactactct
tcgtcatcacctaatccgttaggtgcaggcattggctccggtggtgtagtgactaatttg
gtgttgggaggggctctgtctgctcaaccggccgtacagctcatcacaccctcccaccac
catcatccctcccagcagcaggccttttcctcctccgctgtttcagtgtcgcatagccaa
accaacgggcccctgcctctgtccctgcttcacccccagttcctccccacctcttcctta
gcgtccccggggggtaaggccatcacgcaggttcagtacatccttcccaccctacctgcc
aacaccaaccccaatagtccacctcagcagctcagccagccaaccggtatcttcaacctg
cccacagctccacccacacacatgtccttggccaatgggaggcaacagggaataggttca
ctgacaggatattcgtccagctcagcagtgggagtggttagccctgcagcgagagtgcaa
acacagtccccggtgctgcagggtaaaatgattgttcccatggcaacagtacgaacagca
ccagcccctgcccagcaggttcccgttatggctccaactcttccggtccagaacggtgct
caggctggagggaagatcatccaaatagctcccatgcctgtggtccagtcccacctgtct
catggcggaacggtccatccggccagccccttccccagaacagtgggcacaactgccgtg
gtgtccccgggatcggccccctcccaggctgtgctgctgcctccagctcctaccaggatc
acttatgtccagtccactccaggggtcccatccactctgcctctggtctccacgacatca
gtctcttccatcggccagcaacccctgccggtgcatggttctgcatatgtgcaatcgccc
ctggcaactctcggattcaccgctattgggccacccggtcaaaccctggtgcagcctctg
atcgcgggtcagccacctctcttagccacagctccgtcctcacagccctccatctcggcc
cctgccccgggatccgggggccaggcggtcactgcaatctaccctccctcacctaacgtc
accatggcaacaggggtggtctccatgacagcagtaccccccagcgtggtctactccatc
tcgggcccttctactgtttcctcccacatcctgtccaaacacactgtgacccccagcaca
atcacacactcacatccgcagccccagccggacagacaggccgacaggcacccgcctcca
gaccgacccccagatcgacagaccgaccgaccggccggggggcagacagaactgatgact
cattcggacagacatctggagaggcaaacctccgccagtgtcagctcagtggccccttca
gggggctccgttgtgtccacgaggtcctgcagtcctcttccgatccagacacctggcagt
acaccaggtacacctaaactaacccagctgcctgtcaggacccctcaaaaggtgaaggca
acactggcgaacattcctgtaggcagctatgaaggaggaggccgaggaaaagagagagaa
agggagagagagcgggagaaggagagagtggccgcagccaccagtcgcttctcctttgat
gctgagccagcaggacagacggggcctccatcaacacatcctgccgagggcccgccctcc
tcctcctcttcctcctcctcctccgaccgacccttggaggggtgtagtgccgcggagtcc
tttgacgcccaacacagagaaagcacaaccaccaaagaggctggatggaaggagtccctc
ccctcctcaccccccccccctccatcagccacagaaccgcccctgccgcccccgcaggct
gacaaagatggtcctcccgccaaaaaagtgaaagcccgaccaccaccactgaagaagact
tttgaatccgtcgacaagtcgggcagggtgctgtcggaggtatatttcgaggagcgcttc
gctgagctgccagagtttcggcccgaggaggtcttgccttcccccaccctgcagagtctg
gccacctcaccccgcgccatcctgggcagttatcgccgcaagaggaagaactccacagat
ttggattcagccactgacgagcaagtctctcctaagagaaagagccgtcggcgctcgagc
tgcagctcggagcccaacacgcctaaaagtgcggccaagtgtgagggagacatcttcacc
tttgacagagcagccacggacggagaagacatcctgacggatctggagtttgataaggtt
ccctactcgtccctgagaagaaccctggaccagaggcgagcgctggtcatgcagctgttc
caggagcagggcttcttcccttcagctcaggccactgcagccttccaggcgagatactcc
gatatattccccaccaaggtgtgcctccagctgaagatcagggaggtgcggcagaagatc
atgcagacagccgccccctccgacgtctctgctttcggcatcccggactctctcggctcc
ctccccggaccttctagctcccagtcgggagagggagctctcaagggaggtggggacctg
caggacgacgacgtagagcagggcgcagaggggagccccgaggatcttcgtgattcacag
gagtcttctagacgagggatgctgactaatttaaattga
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integrated database retrieval system
