KEGG   Gasterosteus aculeatus (three-spined stickleback): 120810922
Entry
120810922         CDS       T07457                                 
Symbol
xrcc1
Name
(RefSeq) DNA repair protein XRCC1
  KO
K10803  DNA-repair protein XRCC1
Organism
gat  Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:gat00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    120810922 (xrcc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gat03400]
    120810922 (xrcc1)
DNA repair and recombination proteins [BR:gat03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     120810922 (xrcc1)
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT
Other DBs
NCBI-GeneID: 120810922
NCBI-ProteinID: XP_040021868
LinkDB
Position
XX:complement(5525883..5537813)
AA seq 616 aa
MPEIRLKHVVSCSTEDTTHKADNLLSSDTYRKWKAARPGEKQISVILQLEKEEQVHSIDI
GNEGSAFIEVLVGNSSAVRDQDYEVLLVTSSFMSPTESRNGTNMNRVRFFGTTQLQKSPA
QEKWDRVKIVCSQPYSKNIAYGLAFVKFHSPPDKNDPPATASPKLTKLGQFRVKEESPSV
SPSLQPGSLFFSRDTATKSSTPLKVSPQSERLSYAAAALQAGAGSHSSAQGPSSSSSSSA
SPQPPTKRKFEFGKERQSTSGLSPSKKTSPAGSPEVKAATSKPKPSPAGTPSPGAPKASP
ALKSADKKRESRPKPEPQKAGGPQVPLKRIMEGVVFVLSGFQNPFRGELREKALEMGGKY
RPDWTPDATHLICAFANTPKYSQVKSAGGIIVRKEWVMDCHKRKQKLPCKRYLMDGAESS
SESEMEVDEQSDEEVKAKTPQRQVTPKKAPERRTEEDEYAGSTDVEETGAGDDESAVDTE
DELQRVEIEQQKKAAEGKQEDPYGGSTDENTDAEAEEDHPIPELPDFLSGKHFFLYGKFP
NNERRLLLRYIVAFNGLIEDYMTEKVQFVVTSEGWHDSFEDALMENGNLNFVKPAWIYSI
NERQKILPYQPYSVVP
NT seq 1851 nt   +upstreamnt  +downstreamnt
atgccagaaatccgactcaaacacgtcgtgtcttgcagcaccgaggacactacacacaaa
gcggacaacctgctgagctctgacacctacagaaagtggaaagcagcgagacccggcgag
aagcagatatcggtcatcctgcagctggagaaggaggagcaggtgcacagcatcgatatt
ggaaatgaagggtctgctttcatcgaggtgctggtggggaattcttcagccgtcagagac
caggactatgaggttctgttggtcacgtcttccttcatgtcccccacggagagccgcaac
ggcaccaacatgaaccgagtgcgtttcttcgggacgacgcagctgcagaagagtcccgca
caggaaaagtgggaccgagtgaaaatcgtgtgtagccagccgtacagcaagaacatcgcc
tatggactggcctttgtgaagttccattcaccgcctgacaaaaacgatcctcctgcgaca
gcctccccgaaactcaccaagttggggcagttcagggtgaaggaggagtctccctccgtc
agtcccagccttcagccgggaagtctcttcttcagtcgcgacactgcgacaaagtccagt
actccactcaaagtgtctcctcagagcgagaggttgagctacgctgctgccgcgctgcag
gcgggggccgggtcccactcctcggcgcaaggtccctcctccagttcctccagctccgcc
tcgcctcagccaccaacaaaaaggaaatttgagtttggcaaagagcggcagtccacctcc
ggcctctcgccctcgaagaaaacgagcccggccggctcgcccgaggtcaaagccgcgacc
tccaaacccaagccgagcccggccggcacgccgagccccggcgcccccaaagcttcgccg
gcgttgaagtctgccgacaagaagcgggagagccgacccaaacccgaaccccagaaagcc
ggcgggccgcaggtcccgctcaagcggataatggagggggtggtgtttgtcctcagcggc
ttccagaaccctttccggggggagctgagggaaaaggctctggaaatggggggtaaatat
cgacccgactggacccccgacgccacgcacctcatctgtgccttcgctaacacccccaag
tacagccaggtgaagtccgcggggggcatcatcgtacggaaggaatgggtgatggactgc
cacaagaggaaacagaagctcccctgcaaacggtatctgatggacggagccgagtcgagc
tccgagagcgagatggaagtggacgagcagagtgacgaggaagtcaaagcaaagactcca
cagagacaggtgacccccaagaaggccccggagaggaggaccgaggaggacgagtacgcc
ggctccacggacgtggaggaaacaggagccggcgatgacgagtcggctgtggacacggag
gacgagctgcagagggtggagatagagcagcagaagaaagcagccgaggggaagcaggag
gacccgtacggagggtcgacggatgaaaacaccgacgcggaggccgaagaggatcatccc
atccccgagctaccagacttcctgagcggaaagcactttttcctctacggtaaattcccc
aacaacgagcggcgcctgctgctgcgatacatcgttgcctttaacgggctgattgaggac
tacatgacggagaaggtgcagttcgtggtgaccagcgaagggtggcacgactccttcgaa
gacgcgctgatggagaacggcaatctgaacttcgttaagccagcatggatttactcaatc
aacgaacgacaaaagattctgccgtatcaaccctactcggtggtcccctga

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