Gasterosteus aculeatus (three-spined stickleback): 120810924
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Entry
120810924 CDS
T07457
Symbol
zswim2
Name
(RefSeq) E3 ubiquitin-protein ligase ZSWIM2 isoform X1
KO
K15716
E3 ubiquitin-protein ligase ZSWIM2 [EC:
2.3.2.27
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gat04121
]
120810924 (zswim2)
Enzymes [BR:
gat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120810924 (zswim2)
Ubiquitin system [BR:
gat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120810924 (zswim2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
SWIM
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-UBR
zf-RING_UBOX
ZZ
Motif
Other DBs
NCBI-GeneID:
120810924
NCBI-ProteinID:
XP_040021913
UniProt:
A0AAQ4PLQ4
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All DBs
Position
I:complement(28244210..28247939)
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AA seq
591 aa
AA seq
DB search
MFRNTARRSTASESVSLHQDQALNTTIFLLKSFGPTGFLLREDGEVGDVRVSLGDPHACT
CPAFTKEQEPCKHICWVLLRKFRLPREHECKLLISNANLLHTCQLNSQTNHFKLTIPSQP
VLYGHHKTEINMSLSILLFVGNLNELTVKKIKKRSLDSFQRGLVDRQILELLHGLHQTKG
QQAEDGTLSQAASGPQAGRVCRRPIQAQDVCPICHEALLLEKGQPVSHCRFGCGNNIHIS
CMQVWAEYQGLSGGADAVKCPLCREDFCSLQLLREQARNAAKLFTGSEREKPNRHLGVRC
QGCRLGPVTGKCFKCTVCSYFYLCEDCVKKGSHPQHPLASRTKRMGTWHLVPEDPKDEAP
GATSQSADDSIVPAAAQPLPQYVLDRLPTVRVKPGSLLSDVGQQCRICLLEFSLGQRVRT
LPCHHKFHADCVDEILRKWNSCPVDGYVLHNRCARRRTGETKPSPSGADANPPGDDLKGL
FVPGVALGGRKPGVAPGGPPRSTADADPRTEERQRKEPAGNPKGSSSPNKHGAVTEIRGH
PRPDLFVGGRRPEPRHPAVAGPSGTQPQKDGQHSRYKQATHTDRLGQQRNH
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgtttcggaatactgctcgcaggagcacagccagtgaatcagtgagtctccaccaggac
caggccctcaacacaaccatattcctcctcaagtccttcggcccaaccggctttctactc
cgagaggacggggaggtcggggacgtcagggtgtccttgggggacccacatgcgtgcacc
tgccctgcgttcaccaaggagcaggagccatgcaaacacatctgctgggttttactgcgg
aaattccgactacccagagaacatgaatgtaagctgcttatatcaaatgctaatttgttg
catacctgtcagttaaattctcaaacaaatcattttaaactaacaattccttctcaacct
gttttatatggacaccacaagactgaaataaacatgtctctcagcatattattgtttgta
ggaaatttgaatgaattgactgtgaaaaaaataaagaaaaggtctctagattcctttcag
cgtggactcgtggacagacagatcctggagttgctccacggtttgcatcaaaccaaaggc
cagcaggcagaagacggtactctgagccaagcggccagcggcccgcaggctggacgcgtc
tgccggagacccatccaagcccaggacgtgtgtcccatctgccacgaggcgctgctgctg
gagaaagggcagcctgtgtcccactgcaggttcggctgtggcaacaacatccacatctcc
tgcatgcaggtgtgggcggaataccaggggctgtccggcggggcggacgcggtgaagtgt
cccctgtgcagggaggacttctgctccctgcagctgctccgggagcaggcgagaaacgca
gcgaagctcttcaccggctctgagagggagaagccgaacagacacctgggggtccggtgc
caaggctgccggctcggcccggtcaccggcaaatgtttcaaatgcacggtctgcagttac
ttttacctctgcgaggactgcgtaaagaagggaagccacccgcagcatccacttgcgtca
cgaacaaaaaggatgggaacgtggcaccttgtgcccgaagacccgaaggatgaagcgccg
ggtgcaacgtcccagtcagctgatgacagcatcgtacctgcggctgcacagcctctccca
caatacgtgttggaccgcctccccactgtgagggtgaagccgggctctctcctctcagac
gtgggtcagcagtgtcggatctgtctgctggagttcagcctgggccaacgcgtccgaacc
ctcccctgccatcacaagttccatgccgactgcgtggacgagatcctgcgcaagtggaac
tcctgccccgtggacggatacgtcctccacaaccgctgtgctcggaggaggaccggggag
acaaagccctccccgtcgggcgccgatgcaaacccaccaggcgatgacttaaagggcctg
tttgttccgggagtggcactggggggcaggaagcccggagtcgcccccggcggccccccg
cggtccacagctgatgcggaccctcggacggaagagaggcaaagaaaggaacctgcgggg
aatcccaaaggcagctcttctcccaacaagcatggcgcagtgacggaaatcagggggcac
ccgcggccggacctttttgtgggggggcgtcgccccgaaccacgtcacccagctgtagcc
gggccgtccggaacgcaaccccaaaaggacggacagcattcaagatacaagcaagcgact
catacagacagactcggacagcaacgaaaccactag
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