Gasterosteus aculeatus (three-spined stickleback): 120811083
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Entry
120811083 CDS
T07457
Name
(RefSeq) collagen triple helix repeat-containing protein 1-like isoform X1
KO
K25700
collagen triple helix repeat-containing protein 1
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gat03037
]
120811083
Cilium and associated proteins [BR:
gat03037
]
Other cilia and associated proteins
Stereociliary proteins
120811083
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Gene cluster
GFIT
Motif
Pfam:
CTHRC1_C
Collagen
Motif
Other DBs
NCBI-GeneID:
120811083
NCBI-ProteinID:
XP_040022173
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Position
20:16474856..16479049
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AA seq
257 aa
AA seq
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MSPLSARPLLLLLVCLSLPLYAVEKVRNRGYRKDPDADKCTGNDAEKANCTRHFGEGRPA
HLNNMFPSCVQGPAGGPGREGNPGTNGIPGTPGIPGRDGLKGEKGECVNEIFEEPWRPNY
KQCAWSSLNYGIDLGKIADCTFTKLRSDSSLRVLFSGSLRLKCKNACCQRWYFTFNGAEC
TGPLPVESIIYLDQGSPELNSTINIHRTSSVEGLCDGVKAGLVDVAVWVGTCSDYPRGDA
STGWNSVSRIIVEELPK
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctctgagcgcgcgcccgctgctgctgctgcttgtctgcttgtctttgcctctg
tatgcggtggaaaaggtgagaaatagaggataccgaaaggatcctgacgccgacaagtgc
actgggaatgacgccgaaaaggccaactgcactagacactttggagaaggaagacctgct
catttgaacaacatgttccccagttgcgtgcagggaccggcgggcggccccggcagagag
ggcaaccccggaaccaacggcatcccggggacgccggggatccctgggcgcgacgggctc
aaaggcgagaaaggcgagtgcgtcaacgagatcttcgaggagccctggaggcccaactac
aagcagtgcgcctggagctctctgaattacggcatcgacctggggaaaatagctgactgt
acgttcaccaagctgcggtcggacagctccctgagggtcctcttcagcggctccctcaga
ctcaagtgtaagaacgcgtgctgccagaggtggtacttcaccttcaacggggcggagtgc
accggacccctgcccgtagagtccatcatctacttagaccaaggaagccctgagctcaac
tcgaccatcaacatccaccggacgtcctcggttgaagggctgtgcgacggtgtcaaagcc
ggattggtggacgtggccgtgtgggtggggacctgttccgactacccacggggggacgcg
tctaccggctggaattcagtgtccaggattatcgtcgaggagctgcccaaatga
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