Gasterosteus aculeatus (three-spined stickleback): 120811085
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Entry
120811085 CDS
T07457
Symbol
irx1a
Name
(RefSeq) iroquois-class homeodomain protein IRX-1a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gat03000
]
120811085 (irx1a)
Transcription factors [BR:
gat03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
120811085 (irx1a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
120811085
NCBI-ProteinID:
XP_040022177
UniProt:
A0AAQ4P381
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Position
XX:12740447..12744959
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AA seq
497 aa
AA seq
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MSFPQLGYPQYLSASQAVYGSERPGVLTPSSRGGSTEIGGSPSATAAAVTSVLGMYANPY
AHNYSAFLPYTSADLALFSQMGSQYELKDGPGVHPASFAAHTSPAFYPYGQFQYGDPARP
KNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKV
TWGSRSKEDGEDGNLFGSGDEGEKNEDEEEIDLESIDIDKIDDNDGDQSNEDDDDRSTEG
SRDHRGSVGAGGELDTLEKRRAFALQAHEAFDKSKSAILVHPGSKENSDGNNNNNTTRIL
SPDRAGSFPLPSNNKPKIWSLAETATSPDSSSQKPTSPCGPGATTHSPAAHHQIQTHPAF
LPSHGLYTCQIGKFHNWTNGAFLGQNSLLNVRSFLGVNQHHHHHQHHLQAQQQQQQPTSV
VVSPLAAAAALSSDSKARPEAHSPKHIEHENGGRSDSPPTQILKSSFRPIHDRSSLPSSA
RSPQDATQRVLTALSSA
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccgcagctcggctacccgcagtacttgagtgcctcccaggcggtgtacggg
agcgagaggccgggagtgcttacgccttcgtcccggggagggagcactgaaatcggggga
agcccgtccgccaccgcggcggcggtcacctcggtgttgggcatgtacgccaacccgtac
gcgcacaactacagcgctttcttaccttacaccagcgcggacttggctcttttctcacaa
atgggatcgcagtacgagctgaaggacggtcctggcgtccatcccgccagctttgcagcg
cacacgtctccggccttctacccttacggccagttccagtacggcgacccggccaggccc
aagaacgccacccgggagagcaccagcaccctgaaagcctggctcaatgagcaccggaag
aacccgtacccgaccaagggcgagaagatcatgctggccatcatcaccaaaatgacgctg
acgcaggtctccacgtggttcgccaacgccaggaggaggctcaagaaggagaacaaggtg
acctggggaagcaggagcaaagaggacggggaggacggcaacttgttcggcagcggagac
gagggggaaaaaaacgaagacgaggaggagattgatttggagagcatagatatagataag
atcgacgacaacgacggggatcagagcaacgaggacgacgacgataggtcgacggagggg
agcagggaccaccggggcagtgtcggtgcgggtggagagttggacaccttggagaaaaga
cgggccttcgccctgcaggcccacgaggcctttgacaaatctaagagcgcaattctagtt
cacccagggagtaaggagaactcggacggcaacaacaacaacaacaccacaagaatattg
tccccggatagagccgggagctttcctctcccgtcaaacaataagcctaaaatatggtct
ttagcagagaccgcgaccagtccagatagctcttcccagaaacccacgtccccttgcggc
ccaggggccaccacgcactcgccggcggcccaccatcagatccagacccacccagccttc
ctccccagtcatggactgtacacttgccagattggaaagttccacaactggacaaacggg
gctttcctgggtcagaactccctcttaaacgtgaggtcgtttctgggagtaaaccagcac
caccaccaccaccagcaccacttgcaggcccagcagcagcagcagcagccgacatcagtg
gtggtgtcgccattagcagccgcggcagcactcagcagtgacagcaaggcccgaccagaa
gcccacagtcccaagcacatagaacacgaaaacggtggcaggtccgattcacctccaacg
cagattctgaagtcttcttttcggcccatccatgaccgatcctctctgccctccagcgcc
aggagtccacaagacgccacgcaacgagtcctcactgcgctctcctcggcttga
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