Gasterosteus aculeatus (three-spined stickleback): 120811086
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Entry
120811086 CDS
T07457
Symbol
irx2a
Name
(RefSeq) iroquois-class homeodomain protein IRX-2a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gat03000
]
120811086 (irx2a)
Transcription factors [BR:
gat03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
120811086 (irx2a)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
120811086
NCBI-ProteinID:
XP_040022178
UniProt:
A0AAQ4QI43
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Position
XX:complement(12628330..12632168)
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AA seq
516 aa
AA seq
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MSYPQGYLYQPPGSLALYSCPAYGASALAAPRSEDLARSSSGSAFSPYPGSAAFSASAGA
GFSSPLSYSTDPTAGFPSYMSSPYDAQTSGMAGALSYHPYGSPGYPYQLNDPAYRKNATR
DATATLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPR
NKSEDEDEEDGVGERKEVEHSEKNLENSEASAEDEGISLHVDTLTDHSCSAESDGEKVSC
RVGELGSDQVGNKRDEDGDDRNHEPQAQLSPISVTSSPLTGVEAPLLSHHHHQQHHHHHQ
QLHHLHQLHSQHEDLARGLINNTINTNKSSPCLDSRPSPQNPTVKPKLWSLAEIATSDQK
QQHQQVGPNCPSSSSGLLTPPTSSATSPAASSPSLYPAPSILGRPIYYTSPFYSNYTNYG
NFSPLHGQGILRYTNSSGVSLAAAAAAAAAAAAAAAAANEGLSSSSRQAREASANPKHRP
DSPLVKMNANQIVVAEQQQQQQPHFRTASVEAKKGT
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcctcagggttacctctaccagcctccgggctcgctggctctttactcctgt
ccggcttacggagcctcggctctggccgccccgcgcagtgaggacttggcgaggtcgtcc
tccggctcagccttcagtccttacccgggatcggctgctttctccgcctcggctggtgcc
ggtttctccagtccgctgtcatactccacggatccaactgcgggattcccatcctacatg
agctctccatatgacgcgcaaacatcaggcatggcgggggctttgagttaccacccatac
gggagtccggggtacccctaccaactcaacgacccggcttaccgcaaaaacgccaccagg
gacgccacggccaccctaaaagcctggctgcaggaacacaggaagaacccgtacccgacc
aagggggagaagatcatgctggccatcatcaccaaaatgacactgacgcaggtctccacg
tggttcgccaacgccaggaggaggctcaagaaggagaacaagatgacatgggcgcccagg
aataaaagcgaggacgaggacgaggaggacggcgtcggggagaggaaagaagtggagcat
tcagaaaaaaacctagagaacagcgaggcttccgcggaggatgaaggtatcagcctgcac
gttgacacgctaacggaccactcctgctcggccgagtctgacggggagaaggtcagctgt
cgcgtgggggagctcggctccgaccaggtcggcaacaaacgcgacgaggacggcgacgac
cggaaccacgaaccgcaagctcagctctcacccatatccgtcacatcgtcgcctctaacg
ggagtagaagctccacttcttagccatcaccaccaccaacagcaccaccaccaccaccaa
cagctccatcatctccaccagctccatagccagcacgaggatttggcccggggcctcatc
aataacaccatcaataccaataaatcgtctccctgcctcgatagcagaccttcaccacag
aaccctacagtcaagcccaaattgtggtcgctggcggaaattgctacctcggaccaaaag
cagcagcatcagcaagtggggcccaattgcccctcctccagcagtggcctcctcaccccc
cctacgtcttccgccacctccccggctgccagttccccctccctctacccggccccgtcc
atcctcggaagacctatttattacacgtctcccttttatagcaattacacaaactatggc
aacttcagccccctgcacggccaagggatcctgcggtacactaattcatcgggagtgagt
ctggccgccgctgccgccgctgccgccgcagccgccgccgccgccgctgccgcaaacgag
ggtctgagctcctcctcgcgccaggctcgggaggcgagcgccaaccccaaacacaggcca
gactcccccttggttaaaatgaacgcaaaccagattgttgtcgctgagcagcagcagcag
cagcagcctcatttcagaaccgcaagtgtagaagcaaagaaaggtacgtaa
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