Gasterosteus aculeatus (three-spined stickleback): 120811151
Help
Entry
120811151 CDS
T07457
Symbol
lmo7b
Name
(RefSeq) LIM domain only protein 7b isoform X1
KO
K06084
F-box protein 20
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
120811151 (lmo7b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gat04121
]
120811151 (lmo7b)
Ubiquitin system [BR:
gat04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
120811151 (lmo7b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
PDZ_6
PDZ
PDZ_2
Motif
Other DBs
NCBI-GeneID:
120811151
NCBI-ProteinID:
XP_040022278
LinkDB
All DBs
Position
II:8490444..8512551
Genome browser
AA seq
1181 aa
AA seq
DB search
MEWRQQTSVSCEEAFGEAQRWIQDVTGKSFGSNDFRAALENGVLLCDLINCLKPGIIKRV
NRLSTPIAGLDNVNVFLKACGKVGLNVSQLFHPGDLQDLSTRATLRQDESDRRLKNVLVT
IYWLGRKAHLDSFYTGPQLNFKAFEGLLGLALSKALDEGWYPEREECRGLRPSYGWAKSV
DNIDSRAFRTRPNSEGCGSDAEAEQVFKMETTKQNKGNGFIPPLPPRRKQGREEMGSPLS
RTYQIQVRPERPVQVNPGWIWSKSLSDIPMVYPVRKVPGGTTIYDLDHNECGLETKRKCS
VAAKDSEAQWHDDLMKWKNRRRSTKSDLRKKSQEWDQVINQMAIGAMNRFEKKEAQGGLP
RDQQSPRRHHASPRPYSTSPPSKSSSCNLRPHTRALLACSDSTEAPFSSRSPLGTYNSVR
ASGSPFGAMPAADGKTYSASLASDGARVTTPSLDFPFSSQTQVKAQCSPAPLQPMTQLAG
VAELEDSALENHASQTECQKTSMAPAVQQAAGQPVAGVYKYLSRTGSWSGSASLPRGYRR
SEGSSRLSSTMAPRPFGTRQSSVSSLQRRCSVDNNSEGLLLKSAKEETFSPTAKSSLKRQ
NATAHLKGQHPASIRPKEANQAKQSGTAQTGEVKGATLSSKTDAYNSQPYSQTKLAPRPY
TNPQIRATKGLTRPSNASNDHTKVDHSDMRVSLTLKPNSVPDFGIQTHWGSTGARVKYVQ
PGSPAELCQLCVDDEIVAVNGVAAALMNCKQWKDEMTSSLRTGNLTMDVRRYGNKDWSTS
EGITPNQPGQSRMTLNLTAAAPVVIGGSDHHANSCAATETTVRKMSKLNGQADNVAHGKV
MHGELADNHKTARSKDCNNINSKNQKKRAEFFKLKGGSESAISDLKVPSLSPSSSSWSWD
REEDRRRQEKWQEDQERLLQAQYQRDQERLELEWQRAQQDAKQELRRNTGQTSFEMTGGG
ERPASSQIYVNGLTNKTRKEQSPARDEPHEAGSKPQSNAQGERHDKNSEHAWAEDSCGFA
QLSPAHRAKSWSTPALAGPYKPGIGDERKKRGPSVSNAEKDRKQILEEMKKRTQLLTDNS
WIRQRSSSFYKEPIYVGVPMKRYESLDDLDALRMSTLSTATFSCPRPHSAAAGYRAPTRN
ASSRYSTGTMLSHRNEFDGVWAATNISEELRLESMKPEAPL
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atggagtggcgccagcagaccagcgtgagctgtgaagaggcgttcggcgaggcgcaacgc
tggatccaggatgtgaccggaaaatcatttggctccaacgacttccgtgccgcactggag
aatggagtcctgctttgcgacttgatcaactgtctgaaacctggcattattaagagagtc
aacaggctttctactcccatcgctggccttgataacgtaaatgtattcctgaaagcctgt
gggaaagtgggactgaatgtgtcccagctgtttcatccaggagacctgcaggacctgtcc
acccgtgcaacactcaggcaagatgaaagtgaccgaagactcaaaaatgttctcgtcacg
atctactggttgggtcgcaaggctcacttggactccttctacactggtcctcagctgaac
ttcaaggccttcgaagggctcttgggattggccttgtcaaaagcgctagatgagggctgg
tatccagagagggaggaatgtcgcggcctgagaccgagctacggatgggccaagtctgtg
gacaacattgactctcgagcttttcgaacccgcccaaacagtgaaggctgtggaagcgac
gctgaagctgagcaggtgttcaagatggagacaaccaagcaaaacaaaggaaacggtttt
atccctccgctgcctccacggagaaaacaaggacgggaggagatgggaagcccactatcc
agaacttatcaaatccaggtcagacctgagagaccagtccaggtcaaccctggctggatt
tggagcaaatccctcagtgacattccgatggtgtaccctgtgcgtaaagttcctggtggg
accaccatttatgatttggaccacaacgagtgcggcctggaaaccaaacggaagtgtagc
gttgctgccaaggacagtgaagctcagtggcatgatgacttgatgaagtggaagaaccgt
cgcaggagcacaaagtctgacctccgcaagaaatcgcaagaatgggaccaagtcattaac
cagatggccattggtgccatgaatagatttgaaaagaaagaagcacaaggcggactgcca
agagaccagcagtccccacgcaggcatcacgcttcccctcgtccttactccacctctccg
ccatcaaagtcatcgagctgtaatctccggccacatactcgggctctgctggcctgcagc
gactccacagaggcacctttcagctccaggtctccacttggcacctacaactcagtccgc
gcttcgggatccccatttggagctatgcctgccgctgatgggaagacctactctgcctcc
ctggcttcagacggagcaagagttaccaccccttctctagactttcctttcagctcccag
acccaagtcaaggcacagtgcagcccagctcccctccagcccatgacacagctggcaggt
gttgctgagctggaggactcggccctggagaaccacgcgtcccagacagaatgccagaag
acctctatggcgcccgccgtgcagcaagccgcaggccagccggtcgcaggcgtctacaag
tacttgtccagaacaggatcgtggtccggctcggccagccttcctcgtggctaccggcgg
tccgagggctcatctcgtctctcttctacaatggcacccagaccctttggtaccaggcag
tccagtgtgtcctcactgcagagacgatgcagcgtagacaacaacagcgagggtctgctt
ttaaaaagtgcgaaagaggagaccttttctccaaccgcaaagtcttccctcaaaaggcag
aatgcaaccgcccatctgaaaggtcagcacccggcctccatcagaccgaaggaagctaac
caggcgaagcagagtggcacggcgcagacaggggaggtgaaaggtgccactctctccagc
aagaccgacgcctacaactctcagccctactcccaaaccaagctggctcctcggccgtac
accaacccgcagatccgcgccaccaaaggcttgacccgtccttctaatgccagcaatgac
cacacaaaggtggatcacagtgacatgagagtaagccttactcttaaaccgaacagtgta
ccagactttggtatccagactcactggggctccacaggcgcaagagtcaaatacgtccaa
cctggtagtccagcggagctttgccagctgtgtgtggacgatgagatcgtggcggttaat
ggagttgcggcggcactcatgaactgcaaacagtggaaggatgaaatgacgtcttccctg
cgaaccggcaatctgaccatggacgttcggcgctatggcaacaaggattggagcaccagt
gaagggattactcccaaccagccaggccagagcagaatgaccctcaatctgactgccgcc
gcgccggttgtgataggtggctccgatcaccatgccaacagttgtgccgctacagaaacc
actgtcaggaaaatgtccaaattgaatgggcaggcggacaacgttgcacacggtaaagtc
atgcatggggagcttgctgacaaccacaagacagccagaagtaaagattgtaataatatt
aatagtaaaaatcagaaaaagagggcggagtttttcaaacttaaaggaggttcagaatcg
gcgatatccgatctcaaagtgccatccctcagcccctcctcctccagctggtcgtgggac
cgtgaggaggatcgaaggcgtcaagagaagtggcaagaagaccaggagcgcctcctacag
gcgcaatatcagcgggatcaggagaggcttgaattggagtggcaaagggcacaacaagat
gcaaagcaggagttacgcaggaatacggggcagacctcctttgagatgactggtggtggt
gagcgccctgccagctcccagatctatgtgaatggattgacaaacaaaaccagaaaggag
cagagccctgcccgagatgagccgcacgaagcaggatcgaaacctcaaagtaatgcacaa
ggagagcggcatgacaagaattcagaacacgcctgggctgaggactcctgtggctttgct
cagctgtctcctgcacacagggcaaagtcctggtccaccccagcattagccggcccctac
aagccaggaatcggtgatgagaggaagaagagagggccgtctgtgtctaacgctgagaag
gacaggaagcagatactggaggagatgaagaaaagaactcagcttctgactgataacagc
tggatacgtcagcgcagcagcagcttctacaaggagccgatctatgttggggtgcctatg
aagaggtacgagtctctggacgacctggatgccttgcgtatgtccactctctcaaccgcc
acgttcagctgccctcggccacactctgccgctgcaggttaccgcgctccgactaggaac
gcctcctcccgctacagcactggaacaatgttatcccacagaaatgaatttgacggcgtg
tgggctgccaccaacatctcagaggaactccgactggagtccatgaaaccagaagcccca
ctgtga
DBGET
integrated database retrieval system
