Gasterosteus aculeatus (three-spined stickleback): 120811203
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Entry
120811203 CDS
T07457
Symbol
rxrbb
Name
(RefSeq) retinoic acid receptor RXR-beta-B isoform X1
KO
K08524
retinoid X receptor alpha
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03320
PPAR signaling pathway
gat04148
Efferocytosis
gat04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
120811203 (rxrbb)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
120811203 (rxrbb)
03320 PPAR signaling pathway
120811203 (rxrbb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gat03000
]
120811203 (rxrbb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
gat03310
]
120811203 (rxrbb)
Transcription factors [BR:
gat03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
120811203 (rxrbb)
Nuclear receptors [BR:
gat03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
120811203 (rxrbb)
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GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
Motif
Other DBs
NCBI-GeneID:
120811203
NCBI-ProteinID:
XP_040022369
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Position
XX:complement(10196699..10204182)
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AA seq
444 aa
AA seq
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MSSQQPDSSASNSPTNILGSPFSVISPSLNSPVVSPSLGFGPISNSQISSSAPTSGMHSI
SSSEDIKPPFGLRPMPAHSPGIMLSQKRMCVICGDRSSGKHYGVYSCEGCKGFFKRTVRK
DLSYTCRDNKECLVDKRQRNRCQYCRYQKCLAMGMKREVIKHVKWIKEDGKDEGWMTVQE
ERQRNREREGELEFSVGVNEEMPVEKILEAETAVEQKTELHSDGGSAGNSPHDAVTNICL
TADKQLFALVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIGLKDGVLLASEL
QRDNAQSAGVGAIFDRESVQSAEVGAIFDRVLTELVNKMRDMQMDKTELGCLRAIVLFNP
DAKGLSNTGEVELLREKVYASLEAYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFF
FKLIGDTPIDTFLMEMLEAPHQLS
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcacagcaaccagacagttcagcctccaacagccccaccaacatcttgggttct
cccttctccgtcatcagtccttcactcaactccccggtggtctccccctcgctcggattc
ggacccatcagcaacagtcagatctcttcttcagcacctacatcagggatgcactcaatc
agcagctctgaagatatcaagcctccttttggcctgaggcctatgccagctcacagtcct
ggaataatgttgtctcagaaacgcatgtgtgtcatctgtggagaccgctcttctggcaag
cactacggagtgtacagctgtgagggttgcaaaggtttcttcaaacgaactgtgcgcaaa
gaccttagctatacctgcagagataacaaagagtgcctggtcgacaaacgccagcgcaat
cgctgccagtactgccgctaccagaagtgcctggccatgggcatgaagagggaagtgatc
aaacatgtaaagtggataaaagaagatggaaaagatgagggatggatgacggtccaggag
gagcgccagaggaaccgagagcgcgaaggagagctggagttcagcgtcggagtaaatgag
gagatgcccgtcgagaagattttagaggcagaaactgctgtggagcagaagaccgagctt
cactctgatggtggttctgcaggcaactctccccatgatgcagttaccaacatctgtctg
actgcggacaaacagctgtttgccttggtggagtgggcgaagagaatccctcatttctcc
gagctgccccttgatgaccaggtcatcctcttgcgtgcagggtggaatgagctcctcatt
gcctcgttctcccaccgctccattggtttgaaggacggagttctcctggcctctgagctg
cagcgcgacaatgcacagagtgcaggagttggagccatttttgacagggagagtgtgcag
agtgccgaggtcggcgccatatttgacagggttcttacggagctcgtcaataaaatgaga
gatatgcaaatggacaaaacagagctgggctgcctccgagccatcgtactgttcaaccca
gatgctaaagggctttcaaacaccggtgaggtagagctcctcagagaaaaggtctatgca
tcattggaggcgtactgcaaacagaaatacccagagcagcagggaaggtttgctaagctc
ctccttcggctgccggcgctgcgatccatcggcttgaagtgcttggagcatcttttcttt
ttcaagctgatcggcgacacacctattgacactttcctcatggaaatgctagaagctccc
catcagttgtcatag
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