Gasterosteus aculeatus (three-spined stickleback): 120811240
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Entry
120811240 CDS
T07457
Symbol
irx4a
Name
(RefSeq) iroquois-class homeodomain protein IRX-4a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gat03000
]
120811240 (irx4a)
Transcription factors [BR:
gat03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
120811240 (irx4a)
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GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
120811240
NCBI-ProteinID:
XP_040022440
UniProt:
A0AAQ4PA94
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Position
XX:complement(12525858..12532059)
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AA seq
481 aa
AA seq
DB search
MSYPQFGYPYSSAPQFLMTTNSLTTCCESTGRSIADSGVAAAAAAGQTPVYCPVYESRLL
ATARHELNSAAALGVYGSPYTGGQGYGNYVTYGTDASAFYSLGAFDAKDPTASAHAGITQ
ATAYYPYDPTLGQYQYDRYGSMDGGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIML
AIITKMTLTQVSTWFANARRRLKKENKMTWPPRNKGSEEKRYDEDEDGSQEEQIKSENNE
DETRSRPDKDLQLSDLDEFDTLESENSECELKHRYHLNTHMTTTGDCPAEHLVKDSSLKI
SIPVSLGGERDLSKSCLKTNPEDFQADSRQQAKACYNQQQQQQHQGHQLLDGKPRIWSLA
QTATSLNQTEYPSCMLRCQPPPPSSLTPSPAATSPVTGLDNRQDSPVTTLRNWVDGVFHD
PLFRHSTLSQALTNTTVSWTTNPKGAILEAERGAAALQQHQDSAKDSAMSFPKTINKLFC
S
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatccacaatttggatatccctattcgtctgctccacaattcctgatgacaacc
aactctctgaccacttgctgcgagtccaccggcagatccatagccgactccggagtggcg
gcggcggcggcggccgggcagacaccggtctactgtcccgtgtacgagagccggctgctt
gccacggcgaggcatgaactcaactcagccgccgcgctgggcgtttacgggagtccctac
accgggggtcaaggctacgggaattacgttacgtacggcaccgacgcctcggcattctac
tcgctgggggcgtttgatgctaaagatcccacagcttctgcgcatgcgggaataacccag
gcaacagcctactatccttatgaccctaccttgggacagtaccagtatgacagatatggt
tccatggatgggggaacaaggcggaagaatgccactcgggagacaaccagcacacttaag
gcctggctgcaggaacacaggaagaacccgtacccgactaaaggtgaaaagatcatgctg
gccatcatcaccaagatgactctgacgcaggtctccacctggttcgcaaacgccaggagg
aggctcaagaaggagaacaagatgacatggccgcccagaaataagggctcagaggagaag
agatatgacgaggatgaagacgggtcccaggaggagcagataaagagcgagaacaatgag
gatgagaccagaagtcggcccgataaagacctccagttgagcgatttagacgaattcgac
acgctggagtccgagaactcggagtgtgagctgaagcaccgataccacctgaacacacac
atgacaacgacgggcgactgccccgccgagcacctggtcaaggactcctctctgaaaatc
tccatcccggtttctctgggaggggagcgggacttgagcaaaagttgtctcaaaaccaac
ccggaggatttccaggcggacagcagacagcaggcaaaagcatgttacaaccagcagcag
cagcagcagcatcaagggcaccagctattagacggcaagcctcggatctggtctttggca
caaactgcaacgtccctgaaccagaccgagtacccgtcctgtatgctgaggtgccagccg
ccgccgccctcctccctcaccccgtcccccgccgctacctcacccgtgaccggcctggac
aacaggcaggactcgccggtcaccaccctgcggaactgggtggacggagttttccacgac
ccgttgttcaggcacagcactttgagccaggctctgaccaacaccaccgtctcttggacc
acaaaccccaaaggcgccattctggaggctgaacggggcgcggcggccttgcagcagcac
caagactccgccaaagacagtgccatgagtttccccaaaactatcaacaaacttttctgc
tcttaa
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