KEGG   Gasterosteus aculeatus (three-spined stickleback): 120811302
Entry
120811302         CDS       T07457                                 
Name
(RefSeq) LOW QUALITY PROTEIN: poly(U)-binding-splicing factor PUF60-like
  KO
K12838  poly(U)-binding-splicing factor PUF60
Organism
gat  Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gat00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120811302
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gat03041]
    120811302
Spliceosome [BR:gat03041]
 Complex A
  U2 snRNP components
   U2 related factors
    120811302
 Complex B
    120811302
SSDB
Motif
Pfam: RRM_1 DUF1543
Other DBs
NCBI-GeneID: 120811302
NCBI-ProteinID: XP_040022458
LinkDB
Position
XXI:14232648..14240374
AA seq 526 aa
MAVTETAGGEALTMENGQGTGSKLGLPPLTPEQQEALQRAKKYAMEQSIKSVLVKQTIAH
QQQQLTNLQMAAVTMGFGDPLSPLQSVAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFA
PFGPIKSIDMSWDSVTMKHKGFAFVEYDVPEAAQLALEQMXSVMLGGRNIKVGRPSNIGQ
AQPIIDQLAEEARAFNRIYVASVHPDLSDDDIKSVFEAFGRIKSCTLARDPTTGRHRGFG
FIEYEKPQSALDAVSSMNLFDLGGQYLRVGKAVTPPMPLLTPTTPGGLPPAAAVAAAAAT
AKITAQEAVAGASVLGALAAPQLLSQQMGIPQAVMAAQAPGVITGVTPVRPPIPVLPQVG
LVNPVLASPPVLSNHAAASNQLERKEEKEESLQDGTGQEMLSDQEHMSISGSSARHMVMQ
KLLRKSESTVMVLRNMVGPEDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDADVIV
KIFVEFSMASEMNKAIQALNDRWFGGRKVVAEVYDQDRFNSSDLSA
NT seq 1581 nt   +upstreamnt  +downstreamnt
atggcggttacggagactgcgggaggtgaagctctgacaatggagaatggacagggcaca
ggctccaagctgggcctgccgcccctcacccctgagcagcaggaggcacttcagagggca
aagaagtatgccatggaacaaagcattaagagtgtgttggtgaagcaaaccattgctcat
cagcagcaacagctcaccaacctgcagatggcagcagtgacaatgggctttggagatcct
ctctcacctttacaatcggtggcagctcagcggcagcgtgcactggccatcatgtgtcgg
gtgtatgtgggctccatatactatgagctgggtgaggacaccatcagacaggcctttgcc
ccttttggcccaatcaagagcattgacatgtcttgggattctgttacaatgaaacacaag
gggttcgcctttgtggagtacgatgtgcccgaggctgctcagctggctctggagcagatg
nactcggtcatgctgggggggcgaaacattaaggttgggcggccaagtaacatcggtcag
gcgcaacccatcattgaccagctggcagaggaggcgcgcgcctttaatcggatctacgtg
gcatcagtccaccccgacctctctgacgatgacatcaagagtgtgtttgaggccttcgga
aggatcaagtcttgcacgttagccagagaccccaccacagggcgacaccgaggctttggc
ttcatcgagtatgaaaagcctcagtcagccctggacgctgtttcttctatgaacctcttt
gacctggggggtcagtacctacgggtgggcaaagcagtgaccccgcccatgcccctactg
acccccacgacccccggtggtctgccgcccgctgcagctgtggccgcagcggcagccact
gctaagataacggcccaggaggctgtagccggtgcttcagtcctgggggccttagccgcg
ccccagcttctaagtcagcaaatgggaatacctcaggctgttatggctgctcaggcacca
ggggtcatcacaggtgtgacgccagtgcgtcctcccataccagtgctcccccaggttggt
cttgtgaaccccgtgctcgcgtcgcctccagtcctgtcgaatcacgctgccgcctccaac
cagctggagaggaaggaggagaaggaggaatcgctgcaggatggaacgggccaagagatg
ttgagcgaccaagaacacatgagcatctcgggcagcagtgccagacacatggtgatgcag
aaactgctcagaaaatcagagtccacggtcatggtgcttagaaatatggttggcccagag
gacattgacgacgatctggagggggaggtgacggaagagtgtgggaagtttggcgccgtc
aaccgtgtcatcatataccaagaaaagcaaggagaagaagaggatgcagatgtcattgtc
aaaatttttgtagagttttcaatggcctcagagatgaacaaagccatccaggccctcaac
gaccgctggtttggaggtcgcaaagtagtcgcagaggtgtatgaccaagatcgcttcaac
agcagtgacctctccgcgtaa

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