Gasterosteus aculeatus (three-spined stickleback): 120811339
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Entry
120811339 CDS
T07457
Name
(RefSeq) homeobox-containing protein 1-like isoform X1
KO
K24885
homeobox-containing protein 1
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gat03000
]
120811339
Transcription factors [BR:
gat03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
120811339
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
DUF494
HTH_24
HTH_31
CUT
Motif
Other DBs
NCBI-GeneID:
120811339
NCBI-ProteinID:
XP_040022539
UniProt:
A0AAQ4PUR8
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Position
II:complement(5469238..5483716)
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AA seq
558 aa
AA seq
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MTENSSKKKRRRRRNCAAAFRPAGFPLTPPPLLQTVSTGRMFQQCEEPRFTIEQIDLLQR
LRRTGIRQTEVLHALDTLDHLDRQHGHKLTHKPPYAPPSSSLSSSSAAVASSSMTSTSTQ
TSFPNNRLSLSPNSNNFDNASPPPPIPVASPVAMAAVVQNGLAAVTNGKLSPPRFPLAVV
GGGVTAPGYGFETSEEDLDVDDKVEDLMRRDSAMIKEEIKCFLANRRISQAVVAQVTGIS
QSRISHWLLQQGSDLSEQKKRAFFRWYQLEKSNPGATLAMRAAPLAPLALEDVMDWQQAP
PPLGSPPGGFRLRRGSRFTWRKECLAVMESYFIDNQYPDESKREEIATACNAVIQKPGKK
LSDLERVTSLKVYNWFANRRKDIKRRANIEAAILESHGIEVQSPGGQSNSDEVDGNDFPD
QGCEVSLFDKRASAKQFGFSRADLTSPTQVPTLLPSWFSVLSRGGLSGQRGTSLIGRSLV
SGAGPQAEGSRLTGASWSPPSPSLQDEPTVHSALSEPQDPIGLEKAAVNHGSHALANQAE
GAGRNIRNEIKTETLEDD
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaaactcctcaaaaaaaaaaagaagaagaagaaggaactgcgctgcggcgttt
cgccctgcgggttttccgttaacgccacctccgctgttgcaaacggtctcaaccggacgg
atgttccagcagtgcgaggagcctcgtttcaccatcgagcagatcgacctcctccagagg
ctaaggaggacgggcatcaggcagacggaggtcctccacgccctggacacgctggaccac
ctggaccgccaacatggacacaagctgacccataagcctccttacgcgcctccctcctct
tccttgtcttcctccagcgccgccgtcgcctcttcctccatgacctccacctccacccag
acaagtttccccaacaaccgactctcgctgtcacccaacagcaacaacttcgacaacgcc
tccccgcctccgccgatcccggtggcctcgccggtcgccatggcggcggtagtccagaac
ggcctggccgccgtcaccaacgggaagctgtccccgccacggtttcccctcgccgtggtt
ggcggcggcgtgacggcgccgggctacgggtttgagaccagtgaagaggacctagatgtt
gatgacaaggtggaagacttgatgaggagggacagtgctatgatcaaagaggagatcaag
tgcttcctggcgaacaggcggatctcgcaggccgtggtcgctcaggtgacggggatcagt
cagagccggatctcccactggctcctgcagcagggatcggacctcagcgagcagaagaaa
cgggccttctttcgctggtaccagctggagaagtccaaccccggtgccactctggccatg
cgagccgccccattggccccattggccctggaggacgtcatggactggcagcaagccccg
cctccgctcggttcgccccccgggggctttcgtctgcggcgcgggagcaggttcacctgg
aggaaggagtgcctggccgtcatggagagctacttcattgacaaccagtacccagatgaa
tcgaagagagaggagatcgccaccgcctgcaacgccgtcattcagaaaccaggaaagaag
ctgtctgatctggagagggttacgtctctgaaggtctacaactggtttgccaaccgccgc
aaagacatcaagaggcgcgccaacattgaagcagccatcttggagagccacggcatcgag
gttcagagtccaggcggtcagtccaacagcgacgaggtggacggcaacgacttccctgac
cagggttgcgaggtgtccttatttgacaagagagcttcagccaagcagtttggtttcagt
cgcgctgacctgacctctccgacccaggtacccacgctgctccccagctggttttccgtg
ctgagcagagggggcttgtctggacagcggggcacatctctgattggccgctccctggtg
tcaggggcgggcccccaggcggaaggttccagattgacgggcgcctcctggtctcccccg
tcgccctccctgcaggacgagcccaccgtacacagcgcactgtccgagccccaggacccg
atcggtttggagaaggcggctgtcaatcacggcagccacgccctggccaatcaggcggaa
ggggcggggcgcaatatcaggaatgagatcaagacggaaacgctagaggacgactga
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