KEGG   Gasterosteus aculeatus (three-spined stickleback): 120811387
Entry
120811387         CDS       T07457                                 
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
  KO
K12842  U2-associated protein SR140
Organism
gat  Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gat00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120811387
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gat03041]
    120811387
Spliceosome [BR:gat03041]
 Complex A
  U2 snRNP components
   U2 related factors
    120811387
 Complex B
    120811387
SSDB
Motif
Pfam: Surp RRM_1 cwf21 CID CTK3 SET_assoc RRM_7
Other DBs
NCBI-GeneID: 120811387
NCBI-ProteinID: XP_040022606
LinkDB
Position
21:12824857..12834286
AA seq 1018 aa
MSSKIDFILVTQKMADRTPGGSQKASAKALLESKLKSFSIGKMAVAKRTLSKKEQDEIKK
KEDERAAAEIYEEFLAAFEGGGEGKVKAFVRGGIANATKEEAAADEKKGKLYKPKSRFDN
QSKSFLPLDTPTQFLPVDKRHSAKKPTEKEKKKSNLELFKEELKQIQEERDERHKLKGRV
SRFEPLSGTDGRRSSDGSSRRNRPSSVLDDCAPGSHDVGDPSTTNLYLGNINPQMNEEML
CQEFGRYGPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMNFEMKL
GWGKGVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLKNPTAPMLPPPKNKEEFEK
TLSQAIVKVVIPTERNLLSLIHRMIEFVVREGPMFEAMIMNREINNPMYRFLFENQSPAH
VYYRWKLYSILQGEAPVKWKTEDFRMFKNGSLWRPPPLNPYLHGPYDDGEEEEEDEDGVR
KGSLKEDERDKLEEMLRALTPRRGDIAEAMLFCLNRAEAAEEIVECVTESLSILKTPLPK
KIARLYLVSDVLYNSSAKVSNASYYRKYFETKLCQIFADLNATYKAIQGHLQSENFKQRV
MSCFRAWEDWAVYPDPFLIKLQNIFLGLVNLAAEKEAPVVIVEADPVEDIDGAPIGEYVD
GALLEDVDGVPIDAVPIDGAPIDGAPLDDLDGVPIKPMEEDIDGIPLDPSKEATFKVAPS
KWEAVEEAELQAQAVTTSKWEAIEQPEETKKRDEDDSDYDDRSPRSDDNQSYSNPIREDS
DIKAKMSEMNEEKRTKLREIEVKVMKFQDELESGKRPKKPGQSLQEQVEHYRDKLLQKEK
EKEKLEREKEREKKEKEKAEARLKDLKKEKEKDDTPTRKERKRRHSGSPSPSRSSTRRGR
SPSPRSERSERSERSDRSYSKDTSSRSTHKDSPRPSNKKSSKRYGSLSFALVLSRRYFQD
YLLDACLCLFPPPRSPSPRTPKRSRRSRSKTPKKSAKKSRSKSRSPHRSHKKSKKSKH
NT seq 3057 nt   +upstreamnt  +downstreamnt
atgtcatcgaagatcgactttattttagtcacacaaaagatggcggaccgaacgcctggt
ggctctcaaaaagctagcgctaaggcgttgcttgagagcaaattgaagtctttcagtatt
ggcaaaatggcagtggcaaagaggaccctgagcaagaaggaacaagatgaaataaagaaa
aaagaagatgagcgggctgcagccgagatttacgaagagtttcttgctgcttttgaagga
ggaggggagggcaaggtcaaggcctttgtccgtggcggtattgcaaatgcaacaaaagag
gaggcagctgctgatgagaagaaagggaaattgtacaagcccaagtcacgtttcgataac
caatccaaaagcttcctgcctttggacaccccgactcagtttttaccagtggataaaaga
cattctgcgaagaaacctactgaaaaggaaaagaagaagagcaacttggagcttttcaaa
gaagaacttaaacaaatacaagaggaaagggatgaaagacacaagctgaaaggacgcgtc
agtcgctttgaacctctctcgggcacagacggaagacgctcgtcggatggttcttcaaga
agaaaccgtccgtccagtgttttggatgattgtgcgccaggttcccatgacgttggagac
ccatccactactaacttgtacctgggaaacatcaatccacagatgaatgaggagatgctg
tgtcaagagtttggccgttatggtccgctggccagcgtgaagatcatgtggccgagaaca
gacgaggaacgggctcgggagaggaactgtggttttgtggctttcatgaacaggagggat
gctgagcgagctctcaagaacctaaatggaaagatgataatgaactttgagatgaaatta
ggatggggtaaaggtgtgcccatcccaccccacccgatctacatccctccttccatgatg
gagcacacactcccaccacctccctccggcctacccttcaatgcacagccccgggagagg
ttaaagaaccccactgccccaatgctccctccacccaaaaacaaggaggagttcgagaag
actctgtcgcaagccatagtcaaagtggttatcccaacagaaaggaatttgctctctctc
atccaccgaatgatcgagtttgtggtgcgtgaaggcccaatgtttgaagccatgatcatg
aacagagaaatcaacaatcccatgtacaggtttctatttgagaaccaaagcccggcacat
gtatactaccggtggaagctgtactccatactacagggggaagcaccagtaaaatggaaa
acggaggactttaggatgtttaagaatggctccctgtggcgtccgcctcctctcaatccg
tacctccatggtccgtatgacgacggtgaggaagaggaggaagacgaggacggcgtcagg
aaaggcagcttgaaagaagacgagcgagacaaactagaggagatgctgcgtgctctgact
cccaggaggggagacatcgcagaggccatgttgttttgtctcaaccgcgccgaagcagcg
gaggagatagtggaatgtgtcacggagtctctctccatcctcaaaacccctcttcccaag
aagattgcgcggttatatctagtttctgatgtgctgtacaactcctctgccaaagtgtcc
aatgcgtcgtactacagaaaatatttcgaaaccaagctgtgccagatctttgcagacctc
aacgcgacgtacaaagcgatacagggccacctgcagagtgagaactttaagcaacgagtg
atgtcatgcttccgggcgtgggaggactgggccgtgtacccggaccccttcctgatcaag
ctgcagaacatcttcctggggctggttaatctcgctgcagagaaggaagccccggtggtc
attgtggaggccgatccggtggaggacattgatggggctccaatcggggagtacgtagac
ggggctctgctggaggacgtggacggggtgccgatcgacgcggtgcccatcgacggagcc
ccgattgacggagcccccctggatgacctcgacggggttcccatcaagcccatggaagaa
gacatagacggaatacctctggatccgtccaaggaggcaaccttcaaggtagcaccttcg
aaatgggaggcggtggaggaggcagagttacaagctcaagctgtgacaacttctaaatgg
gaggcaattgagcagccagaagaaacaaaaaaaagggacgaggatgacagtgattatgac
gacaggagcccccgctcagatgataatcagagctactcaaaccccatcagagaggactcc
gatattaaggccaaaatgtctgaaatgaatgaagagaaacgcacaaagctcagagaaatc
gaggttaaggtcatgaagttccaggatgagcttgagtctggaaaaaggcccaagaagcct
ggacagagtcttcaggagcaggtggaacattacagggacaaattactacaaaaggaaaag
gaaaaggagaaacttgaacgggagaaagagcgggagaagaaagagaaggagaaagctgag
gcacgtttgaaggacttgaagaaggaaaaagaaaaggacgacacaccaaccaggaaggag
aggaaacggcgtcacagcgggtcacccagcccatcaaggagtagcacccgacgaggccga
tcaccgtctccccgctcagagcggtcagaaagatctgagcgctccgaccgctcgtactct
aaagacacgtcttcacgctccacccacaaagactcgccgcgtcccagcaacaaaaagtcc
tcaaagaggtacggcagtctgtcctttgctttagtgctgtcacgccgctatttccaagac
tacctcttagatgcttgtctctgtttgtttcctccccccagatctccttctcctcgcaca
cccaaacgatcgaggcggtcgcgctccaagacgcccaagaagtcagcgaagaaatcccgc
tccaaatcgaggtctcctcaccggtcgcataaaaaatcaaagaagagcaaacactga

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