Gasterosteus aculeatus (three-spined stickleback): 120811412
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Entry
120811412 CDS
T07457
Name
(RefSeq) clathrin heavy chain 1-like isoform X1
KO
K04646
clathrin heavy chain
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04142
Lysosome
gat04144
Endocytosis
gat05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120811412
04142 Lysosome
120811412
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
120811412
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120811412
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gat04147
]
120811412
Membrane trafficking [BR:
gat04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
120811412
Exosome [BR:
gat04147
]
Exosomal proteins
Proteins found in most exosomes
120811412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_PEP5_VPS11
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
120811412
NCBI-ProteinID:
XP_040022688
LinkDB
All DBs
Position
I:4560050..4581030
Genome browser
AA seq
1685 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMADPNN
PIRRPISADSAIMNPASKVIALKDAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTV
ALVTDNAVYHWSMEGDSQPIKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVG
AMQLYSVDRKVSQPIEGHAAGFAQFKMEGNTEESTLFCFAVRGQAGGKLHIIEVGTPPTG
NQPFPKKAVDVFFPPEAQNDFPVAMQISSKQDVVFLITKYGYIHLYDLETGTCIYMNRIS
GETIFVTAPHEPTAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAG
AEELFARKFNTLFAAGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFG
ILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVY
LRANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRNVMRISPEQGLQFSQMLVQD
EEPLSDITQIVDVFMEYNLIQQCTSFLLDALKNNRPMEGPLQTRLLEMNLVHAPQVADAI
LGNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLS
VEDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLTELFESFKSFEGLFYFLGSIV
NFSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNSLQKYIEIYVQKVNPSRLPVVIGGLLDVDCAEDVIKNLILVVRGQ
FSTDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPF
YDSRVVGKYCEKRDPHLACVAYERGQCDQELIHVCNENSLFKSLSRYLVRRKNPELWASV
LLETNNYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFS
EHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNT
SAVQVLIEHIGNLDRAYEFAERCNEPPVWSQLAKAQLQKGLVKEAIDSYIKADDPSAYME
VGQAAAQSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQ
QVGDRCYDDKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFA
CVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTE
LAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWGELVFLYDKYEEYDNAIITMM
NHPSDAWKEGQFKDIVTKVANVELYYKAVQFYLEFKPLLLNDLLIVLSPRLDHSRAVNFF
SKVKQLPLVKPYLRSVQNHNNKSVNEALNNLFIVEEDYAAVRASIDAYDNFDNISLAQGL
EKHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDIELAEELLAWFLT
EDKKECFAACLFTCYDLLRPDVVLETAWRHNLMDFSMPYFIQVMREYLSKVDAIKEKVDK
LEASESLRKQEEQATESQPIVYGSPQLMLTAGPNGAVPPQQPYGYGYPAAPGYGQPPQPG
FGYGM
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atggcccagatcctacccatccgcttccaggagcacctgcagctccagaacctgggaatc
aacccggccaacattggattcagcactctcaccatggagtcagacaagttcatctgcatc
agagagaaagtgggtgagcaggcccaggtcgtcatcatcgacatggccgaccccaacaat
cccatccgcaggcctatctctgcagacagcgccatcatgaaccctgccagcaaagttatt
gcccttaaagacgcggcaaagaccctgcagatcttcaacatcgagatgaagagcaagatg
aaggctcacaccatgacggacgacgtgaccttctggaagtggatctccctcaacaccgtc
gccctggtgacggacaacgccgtgtaccactggagcatggagggtgactcccagccaatt
aaagtcttcgaccgtcactccagcctggcaggctgccagatcatcaactaccgcaccgac
gccaagcagaagtggctgctgctcattggcatttcagcgcagcaaaaccgtgttgtgggg
gccatgcagctgtactcggtggacaggaaggtctctcagcccatcgaggggcacgccgct
ggcttcgcacagttcaagatggagggcaacaccgaagagtccaccctgttctgcttcgcc
gtgcgagggcaagcaggaggaaagctgcatatcattgaggtggggactccgcccactggg
aaccagccgttcccaaagaaagctgtggacgttttctttcccccagaagctcaaaacgac
ttccctgttgctatgcagatcagttccaagcaggatgtggtcttcctcatcaccaagtat
ggctacatccacctgtacgacctggagactggaacctgcatctacatgaacaggatcagc
ggggagaccatttttgtcactgccccccatgagcccaccgcgggcatcatcggagtcaac
aggaagggacaggtgttgtcggtgtgcgtggaggaggaaaacatcattccctacatcacc
aatgtgctccagaacccggacctggccctccgcatggcggtccgcaacaacctcgctggg
gccgaggagctgttcgcccgcaagttcaacaccctctttgcagcggggaattattccgag
gccgccaaggtggcggccaatgcgcccaagggcatcctgcggaccccagacaccatccgt
cggttccagagcgttccggcccaaccaggccagacgtctcccttgctccaatactttggc
atcttgctggaccaaggccaactgaataagtttgagtctctggagctgtgcaggcccgtc
ctccaacagggccgcaagcagctcctggagaaatggttgaaggaggacaagctggagtgc
tcggaggagctcggagacttggtgaagtctgtggaccctactcttgccctcagtgtctac
ctcagagccaacgtccccaacaaggtcattcagtgctttgcggagactggacagttccag
aagattgtcctctatgccaagaaggtgggctacactccagactggatctttctgcttagg
aatgtgatgcggatcagtccagaacagggccttcagttctcccagatgctggttcaggat
gaagagcctctttcggacattacacagattgttgatgtgttcatggaatacaacctgatc
cagcagtgcacatccttcctccttgatgccctgaagaataacagacccatggaaggacca
ctgcagacacgcctgctggaaatgaatctggtgcacgcaccacaggttgcagacgccatc
ctgggaaatcagatgttcacccactacgaccgtgctcatgtggctcagctgtgtgagaag
gccgggctcctccagagggcgctggagcattacactgacctgtacgatataaagcgtgcg
gtggtgcacacacaccttctcaacccagagtggttggtgaatttcttcggctctttgtcg
gtggaggactccctggagtgtctgagggccatgctgtctgcaaacatccgccagaacctg
cagatctgtgtgcaggtggcctccaagtaccatgaacagctctctactcagtccctcact
gaactttttgagtcattcaagagctttgagggtttgttctatttcttgggttctattgtg
aacttcagccaggatccagaggtccacttcaaatacatccaagccgcctgcaagacaggc
cagatcaaagaggtggagagaatctgtcgagaaagtaactgctacgaccccgagcgtgtg
aagaacttcctcaaggaggccaagctgactgaccagctgcctttgatcatcgtgtgtgac
cgctttgactttgtccacgatctggtgctgtacctgtaccgcaacagcctgcagaaatac
attgagatctacgtgcagaaggtgaacccaagccgtctgccggtggtcattggaggctta
ctggatgtagattgtgctgaggatgtgattaagaacctgattctggtggttagaggccag
ttctcaacagatgaactggtggctgaggtagagaaaagaaatcgtctgaagctgctgctg
ccttggttagaggctcgtattcatgaaggctgtgaggagccggctacccacaatgccctg
gccaagatctacattgacagcaacaacaacccagagcgattcctgagggagaaccccttc
tatgacagccgtgtggtgggaaagtactgtgagaaaagagacccccacctggcctgcgtg
gcctatgaaagaggacagtgtgaccaggaactgattcatgtgtgcaatgagaactctcta
ttcaagagcctctcccgctaccttgtacgccgcaagaaccctgagctgtgggccagcgtg
ctgctggagaccaacaactacagaagacccctcatcgaccaggttgtccagacggccttg
tctgagactcaggatcccgaggaagtgtccgtcacagtcaaggccttcatgaccgctgac
cttcccaacgagctcatcgagctcctggagaagattgtgctggataactctgtcttcagc
gagcacagaaacctccagaatctgctcatcctgacggccattaaagctgatcggacacgc
gtcatggagtacatcaaccgcctggacaactacgacgccccggacattgcaaacatcgcc
atcagcaatgagctgtttgaggaggcttttgctatatttagaaaatttgacgtcaacacc
tctgctgtgcaggtgctgattgagcacatcggcaacctggatcgagcttacgagtttgcc
gaacgctgcaatgagccgccggtgtggagtcagctggccaaggcccagctccagaagggc
ctggtcaaagaagccattgactcttacatcaaggccgatgacccctctgcctacatggag
gtgggacaagccgcggcccaaagtggaaattgggaagacctggtgaagtttctgcagatg
gcccgtaagaaggcccgcgagtcatacgttgaaaccgagctgatctttgccctggccaag
accaaccgcctggctgagctggaggagtttatcaatggacccaataatgctcacattcag
caggtgggtgatcgttgctatgacgacaagatgtacgacgcggccaagctgctttacaac
aacgtttccaactttggccgcctggcctccactctggtgcatctgggagagtaccaagcc
gctgtggacggagctcgcaaagccaacagcactcgtacctggaaagaggtgtgcttcgcg
tgtgtcgatgggaaagagttccgtctcgcccagatgtgtgggctgcatattgtcgtccac
gctgatgagctggaggaactcatcaactactaccaggaccgcggttactttgaggagctg
atcaccatgctggaggccgccctggggctggagcgggctcacatggggatgttcactgag
ctggccatcctctactccaaattcaaaccccagaagatgagggagcacctggagctcttc
tggtcccgtgtcaacattcccaaggttctcagggcagcggagcaggcccacctctggggg
gagctggtgttcctctatgacaagtacgaggagtacgacaacgccatcatcaccatgatg
aaccacccatctgatgcctggaaggagggccagttcaaagacattgttaccaaggtggcc
aatgtggagctgtactacaaggccgtccagttttatctggagttcaaaccgctgttactg
aacgacctgctcatcgtgctttctccaagactcgaccactcgcgtgctgtcaacttcttc
agcaaggtgaaacagctgcccctggttaaaccgtacctacggtccgtccagaatcacaac
aacaagtccgtaaatgaggccctgaacaacctcttcatcgtcgaggaagactacgcggct
gtgcgtgcttccattgatgcctatgacaactttgacaacatctcactggcccagggcctc
gagaagcacgagttgattgagttcaggaggattgcggcctaccttttcaagggcaacaac
cgctggaaacagagtgtcgagctctgcaagaaggacaagctctacaaggacgccatgcag
tacgcatcagagtccaaagacatcgagctggcggaggagcttctggcctggttcctgacc
gaggacaagaaggagtgttttgccgcctgcctcttcacctgctacgacctgctgcggccc
gacgtggtgctggagaccgcctggcgacacaacctcatggacttctccatgccgtacttc
atccaggtcatgagggagtatctctctaaggttgatgcgataaaggaaaaggtcgacaag
ctcgaggcctccgagtccctgaggaaacaggaggagcaggccaccgagtcccaacccatt
gtttacggctccccccagctgatgctcacggcggggcccaacggggccgtacctccccag
cagccctacggctacggctacccagcagccccgggctacggccagcccccgcagcccggc
ttcggttacggcatgtga
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integrated database retrieval system
