Gasterosteus aculeatus (three-spined stickleback): 120811445
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Entry
120811445 CDS
T07457
Symbol
prpf4bb
Name
(RefSeq) pre-mRNA processing factor 4Bb isoform X1
KO
K08827
serine/threonine-protein kinase PRP4 [EC:
2.7.11.1
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
gat01001
]
120811445 (prpf4bb)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gat03041
]
120811445 (prpf4bb)
Enzymes [BR:
gat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
120811445 (prpf4bb)
Protein kinases [BR:
gat01001
]
Serine/threonine kinases: CMGC group
DYRK family [OT]
120811445 (prpf4bb)
Spliceosome [BR:
gat03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
120811445 (prpf4bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Pox_ser-thr_kin
CoV_S1_C
Pkinase_fungal
CSTF_C
Motif
Other DBs
NCBI-GeneID:
120811445
NCBI-ProteinID:
XP_040022706
LinkDB
All DBs
Position
XXI:complement(14477662..14485870)
Genome browser
AA seq
1023 aa
AA seq
DB search
MADVEMDIASTRMNNGNEHVKQDLEIQERSGNEDSGDMSEEEGEEEEEQAETNGEKTEDG
PKHHSSSGKHKRKKHKHRSKHKKHKHASDEDKDRKRKHRHKHRKHKRKEAPSPSAAAALF
ASSAHKKVESSPSSGNPSLDDRALLEDLEKRRAMIKAELDSQLMEGKVQSGMGLILQGYN
SGSEEDGDGRIRNGEPRQRVSSGKPISPRGGKGGKSRRESTEASKSSSKRRSRSKSAERP
GQAKESKQDKVNKTTKDTAVKDRGRGRSRSKDRKHSDSTDLSKERARKSNSPTTWRGEQK
GSRADKRSSPQRDDRPNQERAGRRSRSPARERPSRSDADRDKRPAKSPSKDASSGKENRS
PHRRGLHSPMRKRSASPRHRDAHHPPAGASDRTAKPSYSPSKIRSPPRRARSRSPDARRR
DADRQDSPMRKRLRPDAGPGRDRSRDNSPRAAARRRMSRSPFRRRSPPSPRRRSRSSPRR
RSRSPLGHRSGERDRYGRLRQYRRSMSRDRGRRRRRSRDEDKFKGSLSEGMKVDKESSEE
EPLEDFDGEEVDEEALIEQRRQQRLAIVQKYKVGTDDSNAMSEPSSPQSSTRSRSPSPDD
ILERVAADVKEYERENLNTFEASIKAKHNLIAQEKDGANPKKPSAPDMFTESDDMFAADF
DNARMRAAGVGKDFKENPNLRDNWTDAEGYYRVNIGETLDKRYDVYGYTGQGVFSNVIRA
RDTARAGQEVAVKIIRNNELMQKTGLKELEFLKKLNDADPDDKFHCLRLFRHFYHKQHLC
LVFEPLSMNLREVLKKYGKDVGLHIKAVRSYSQQLFLALKLLKRCNILHADIKPDNILVN
ESKTILKLCDFGSASHVADNDITPYLVSRFYRAPEIIIGKPYDYGIDMWSVGVTLYELYT
GKILFPGSSNNHMIKLAMDLKGKMPNKMIRKGLFKDQHFDSNLNFLYIEVDKVTEREKVT
VMSTINPTKDLLVDMIGGQRLPEDQRKKVMLLKDMLDGTLMLDPAKRITINQALQHAFIQ
EKI
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgttgagatggacatcgcgtccacaagaatgaataatggcaacgaacacgtg
aagcaggatctggagatccaagaaagaagtggaaatgaggacagcggagatatgtctgag
gaagagggggaagaagaggaagagcaggcagagactaatggtgagaagacagaagatggg
cccaaacatcacagcagcagcggtaaacacaagaggaaaaaacacaagcatcgtagtaag
cacaaaaaacacaaacatgcctctgatgaagacaaggaccgcaaacgcaagcatcgtcac
aaacacaggaaacacaaacgcaaagaggcgccctctccctccgctgccgctgccctcttt
gcctcctccgcccacaagaaggttgaatcctctccctcctctgggaatccaagcctggac
gaccgggccctgctggaggatttggagaaacggagggccatgatcaaagctgagctggac
agccagttgatggagggcaaggtccagtcgggaatgggcctcatccttcagggttataac
tccggatccgaagaggacggagatggtaggatcagaaacggagaaccgcgtcaaagggtc
agttcaggtaaacccatttctcccagagggggaaaagggggcaaatcgagacgcgaatca
acagaggccagtaagtccagctccaagcgccgcagtcgcagcaagtcagcggagaggccg
ggacaggccaaggagtctaagcaggacaaggtgaacaaaaccaccaaggacacagctgtc
aaagacagaggccgcggcagaagccgctcgaaagaccgaaagcattctgacagcactgat
ctgtccaaggagagagcccggaagtccaactcccccaccacctggagaggagagcagaaa
ggcagccgcgcagataaacgttcctccccgcagcgcgacgacagaccaaaccaggagaga
gcggggcgaaggtccagatcgccagcgcgagagcgaccgagtcgctcggacgccgaccgg
gacaagcgccccgccaagtccccgtccaaggatgcgtcttcagggaaggagaaccgctcc
cctcacagacgagggcttcacagccccatgaggaaacgcagcgcttcccctcggcaccga
gacgcccaccacccgccggcaggtgcctcagacaggacagcgaaaccgagctactctccg
tccaaaatcaggtctccccccaggagagcccgcagccgctcgccggacgccaggaggagg
gatgccgacaggcaggactcgccaatgaggaagcgcctgcggccagacgcggggccgggc
agagatcgctcacgtgacaacagtcccagagcagcagctcgccgcaggatgagccgctcg
ccttttagacggaggtcaccaccatcaccacgacgacgctcccggtcttccccccgcaga
cggagcagatctccattgggacacaggtctggggagagagaccggtacggaaggctccga
cagtaccgccgctcaatgtcccgcgaccggggacggcgaaggagacgcagccgagatgag
gacaagttcaagggcagcctgtcagagggcatgaaagtcgacaaggaatcctcagaggaa
gaaccgttagaggactttgacggagaggaggtagacgaagaagctttgatcgaacagcgc
cggcagcagcgtttggccatagtccagaaatacaaggtggggactgacgacagcaacgca
atgtcggagcccagcagcccccagagcagcacgcgcagccgctccccctcccccgacgac
atcctagagcgagtcgccgccgacgtcaaggagtacgagcgcgagaacctcaacaccttc
gaggccagcatcaaagccaagcacaacctcatcgcccaggagaaagacggagccaacccg
aagaagccttcagcgcccgacatgtttacagagtcagatgacatgtttgctgctgacttt
gataatgccaggatgagagcagcaggtgtggggaaggacttcaaggagaaccccaacctc
agggacaactggacagatgctgagggttactaccgggtgaacatcggggagacgctagac
aagcgctatgacgtttatggctacaccggccagggggtgttcagcaacgtgatccgagcg
agggacactgccagggccggccaggaggtggcagtcaagatcatccgcaacaacgagctc
atgcagaagaccggtttgaaagagttagaattcctgaagaagctgaatgacgctgatcct
gatgacaagttccactgccttcgcctcttcaggcacttctaccacaagcagcatctctgt
ctggtgtttgagcctctcagcatgaatttgcgggaggtcttgaagaaatacggtaaagac
gtcgggctccacatcaaggctgtgcgttcctacagtcagcagctcttcttggccctcaag
ctgctgaaacgatgcaacatactccacgccgacatcaagccggacaacatcctggtgaac
gagtcaaagactattttgaagctttgtgactttggttctgcgtcccacgtcgctgacaac
gacatcaccccgtacctggtcagcaggttctacagagctccagagatcatcatagggaag
ccgtacgactatgggattgacatgtggtcggtcggcgtcaccttatacgagctttacact
ggaaaaatcctcttccccggatcctctaacaatcacatgatcaaactcgctatggacctc
aaggggaagatgcccaacaagatgatccgtaaaggcctcttcaaagaccagcactttgat
tccaatttgaacttcctgtacattgaagtagacaaagtgacagagagggagaaggtgacc
gtgatgagcaccatcaaccccaccaaagacctgctggtggacatgataggaggccagcgg
ctgcccgaggaccagaggaagaaagtgatgctgctgaaggacatgctggacggcaccctg
atgctggacccggccaagcgcatcaccatcaaccaggccctgcagcacgccttcatccag
gagaagatctga
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