Gasterosteus aculeatus (three-spined stickleback): 120811465
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Entry
120811465 CDS
T07457
Symbol
trpc1
Name
(RefSeq) short transient receptor potential channel 1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gat04040
]
120811465 (trpc1)
Ion channels [BR:
gat04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
120811465 (trpc1)
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
MTR4-like_stalk
LHD_TRPY1
TALPID3
Motif
Other DBs
NCBI-GeneID:
120811465
NCBI-ProteinID:
XP_040022756
UniProt:
G3NHW0
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Position
XXI:12806549..12818050
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AA seq
796 aa
AA seq
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MHISAWPYSLSVVMAALYQGTEASSPDTFLALKDVREVKEETTLDEKLFLLACEKGDYYM
VKKLLEENRHGELNLNCVDALGRDAVTITIENENLDILQLLLEHGCQATDALLVAIDSEV
VGAVDILLNHRPRRSSKPSIAKLMQRIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQD
ISLPRPHAVGCECTLCNAKNKKDSLRHSRFRLDIYRCLASPSLIMLTEEDPILRAFELSA
DLKELSLVEVEFRNDYDDLAKQCKMFAKDLLAQARNSRELEVILNHTSNEDQVDKRGLLE
ERMNLSRLKLAIKYNQKEFVAQSNCQQFLNTVWFGETASYRRKHTCLKMATVLSVAMLWP
LLSVCYLLVPRSRVGQIIHTPFVKFIIHSASYFTFLLLLNLYSLVYNDGKKNTMGPALEM
IDYLLILWIIGMVWSDVKRLWYQGLEDFLDESRNQLSFVMNSLYLATFALKIVAHSKFKN
VEETERKNWDAFHPILVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQEFGKF
LGLFLLVLFSFTIGLTQLYGKDQQDPDKNPPKDCEGIFCQRQSNDAFHTFMGTCYALFWY
IFSLAHVALFVTRISYTEELRSFVGAMIIGTYNIVVVIVLTKLLVAMLHKSFRQIANHED
KEWKFARAKLWLSYFDDKCTMPPPFNILPSPKTVCYLVTSMSKWICSHTSKGKVKRQNSL
REWKNLKQKHDENYQKIMCCLVHRYLTSTRQKMQSTDQATVENLNDLRQDLSKFRNEMRD
LLGFRTSKYAMFYPRS
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcagcgcttggccgtactcgctctccgtcgtaatggcagctctgtaccagggc
acggaggcttcctctccggatacatttctggccttgaaagacgtgagggaggtgaaagag
gaaaccacgctggacgagaagctcttcctgctggcgtgcgagaaaggcgactactacatg
gtgaagaaactgctggaggagaaccgccacggagagctcaacctcaactgcgtggacgcg
ctgggccgggacgccgtcaccatcaccatcgagaacgagaatctggacatcctgcagctg
ctcctggaacatggctgccaggcgacggacgccttgttggtggccatagactcggaggtg
gtgggagctgtggacatcctcctcaaccacaggccgaggagatcctccaagccctccatc
gcaaaactgatgcagcgcattcagaacccagagtactccaccacgatggatgtggctccg
gtcatccttgcagcccacaggaacaactacgagatcctgacgatgctgctgaaacaggac
atctcgctgccccggccgcacgccgtaggctgcgagtgcacgctttgcaacgctaagaac
aaaaaggacagcttgcggcactccaggttccgcctggacatctaccgctgcctggccagc
ccctctctgatcatgctgactgaagaagaccccatacttagggcctttgaactgagtgca
gacctgaaggagctcagtctggtggaggtggagttcaggaacgattatgacgatctggcg
aagcagtgcaagatgttcgccaaggacttgctggctcaggcgcgaaactctcgagagctc
gaagtgattctcaaccacacatccaatgaggatcaagttgacaagaggggtctgctcgag
gagcggatgaacctcagccgactcaagctcgccatcaagtataaccaaaaagagtttgtg
gctcagtccaactgtcaacagttcctcaacaccgtctggttcggggagacggccagttac
cggcgcaagcacacctgtctgaagatggccacggtgctgagcgtggccatgctttggccg
ctcctgtccgtctgctaccttctggtgccgcgctcccgcgtgggccagatcatccacacg
cccttcgtcaagttcatcatccacagcgcctcctacttcaccttcttgctgctgctgaac
ctgtactctctggtctacaatgacggcaagaagaacaccatgggccctgcgctggagatg
atcgattacctgctcatcctttggatcatagggatggtgtggtcggatgtgaagcgcctg
tggtaccaggggctggaggactttctggatgagtcgaggaaccagctgagcttcgtcatg
aattccctttacctggccacctttgccctcaagatagtagctcacagcaagttcaagaac
gtggaggaaacggagaggaagaactgggacgccttccaccccatcttggtggccgagggc
ctgtttgccttcgccaacgtgctgagttacctgcgactcttcttcatgtacaccaccagc
tccatactggggccgctgcagatctccatgggtcagatgctgcaagagtttgggaagttt
ttgggcctcttcctgttggtgttgttctccttcaccattggactcacccagctttacgga
aaggaccagcaggacccggacaagaatccaccaaaggactgcgagggcatattctgccag
cggcagagcaacgatgcgttccacacgttcatggggacctgctacgccctgttctggtac
atcttctcgctggcgcacgttgctctcttcgtcacccgcatcagctacacggaggagctg
cgctcttttgtgggcgccatgatcatcggcacctacaacatcgtggtggtgatcgtgctg
accaagctgctggtggccatgctccataaaagcttcagacaaatcgctaatcacgaggac
aaggagtggaagttcgctcgggccaaactgtggctcagctactttgatgacaagtgcacc
atgcctccgccattcaacatcctcccctccccgaagactgtctgctacctggtgaccagc
atgagcaagtggatctgttctcacacctcaaagggcaaagtgaagcgacagaatagcctc
agggagtggaagaacctgaagcagaagcatgatgagaactatcaaaagatcatgtgttgc
ctggttcaccgctacttgacctccacgcggcagaagatgcagagcacggaccaggccacg
gtggagaacctcaacgacttgcgccaagacctctcaaagtttcgcaatgaaatgagggac
ctgctgggcttccggacctccaaatatgccatgttctacccaaggagctaa
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