Gasterosteus aculeatus (three-spined stickleback): 120811562
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Entry
120811562 CDS
T07457
Symbol
zeb1b
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger E-box-binding homeobox 1b
KO
K09299
zinc finger homeobox protein 1
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gat03000
]
120811562 (zeb1b)
Transcription factors [BR:
gat03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
120811562 (zeb1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-C2H2_15
Homeodomain
zf-H2C2_5
zf-met
zf-C2H2_16
zf-C2H2_6
Zn_SUZ12
Zf-C2H2_ZNF451_C
Motif
Other DBs
NCBI-GeneID:
120811562
NCBI-ProteinID:
XP_040022965
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Position
XXI:3896362..3940229
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AA seq
1138 aa
AA seq
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MADGPRCKRRKQANPRRNNVTNYGNAVEAGSDSDDEDKLHIAEEEGSLADGADCACTPPD
DKRATQRCWDGVKEECASDGEDDGSTDAHLEEMLQQGDTAVIYPEAPEDEPQRQGTPDAG
VHDENGTPDSFSQLLTCPYCARGYKRYSSLKEHIKYRHEKTEESFNCPECSYSFAYRAQL
ERHMTVHKGGRDQRHIPQSGGNRKFKCTECGKAFKYKHHLKEHLRIHSGEKPYECSNCKK
RFSHSGSYSSHISSKKCISVISVNGRPRSGNAKTQSQGLSPVLPTSPSALHTQIREKLEH
SKPLQEQLPLNQIKTEPVDYEYKPTLITSQAMAAMNGGVFNGGGSTPLQGTVQAVVLPTV
GLMSPISINLADLQNALKVAVDGNVIRQVLESNAKGQGQVNSGLTTGMLHPAQQQLISAI
SLPIVGQDGNAKIIINYSLDPNQGQLMAHNLKKESEPTSPDQTTTDTFKSQKLPEDLTIR
RTGPNETKEKEENTTKTCLLCDNCPGGLEALHALTHCKKDGVRLNGVGLDKSDSAVAALL
SEGGLCNQPKNLLSLLKAYFALNAEPTKDELAKISDSVSLPIHVVKKWFDKMQEGQISLG
APTPPSEEEEDTCEASRVVSLVPGKDTANMSPSGTRGSPTEATPAEVNGSHSTPASPSPL
NLTAGGPVPAPPPQSTEGPLDLSLPRPTREEGERVMAVARVYPSPSSGSNMDVDEPLNLT
CTKKEASPLSAMGASPIALYASQPGAKALDIVTTMQCLRALATNNKQTILIPQLAYTYTT
TASSPAGTQTQETIHLNGVKEEKHDTGSEGVSTMEEQNDSDSGPARKKMKKTDGSMYACD
LCDKIFQKSSSLLRHKYEHTGKRPHECGICSKAFKHKHHLIEHMRLHSGEKPYQCDKCGK
RFSHSGSYXQHMNHRYSYCKKETQGEGRESPEEDGEARAEMEALARLERLLAPSQLDLDE
RGSSTREDEESEDEEEDGAVDMDDIQVVQIGDEGGDEEEEEERIEEETEIVLKEREGGEE
RNEMEMEKEMVEVEGNEQRNEEEMERVLVQGGGQKKKTAIEAEEEDKEEDQEADSRRDEL
LGSSQEEKGEEDEEAMDAEEGLTEEGKAEVEVTEGSGGETDTACGEQNQTLQEKCDTD
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcgaacccgaggaggaacaacgtg
actaactatggcaatgcagtggaggcgggctcggactccgatgacgaggacaagctgcac
atcgccgaggaggaaggaagcctggcggacggggccgactgcgcctgcaccccgccggac
gacaagcgcgccacgcagcgctgctgggacggagtgaaggaggagtgcgcgtcggacggc
gaggacgacgggagcacagacgcccacttggaggagatgctgcagcaaggggacacggca
gtcatctacccagaagccccggaggacgagccccagcgccagggcacgcccgacgccggc
gtccacgatgagaacggaactcccgattcgttctctcagctgctcacctgcccgtactgc
gcacgaggctacaagcgttacagctccctgaaggagcacatcaagtaccgacacgagaag
acggaggagagcttcaactgccccgagtgcagctacagcttcgcctaccgcgctcagctg
gagcggcacatgacggtccacaagggcggacgggatcagagacacatcccccagtcggga
ggcaatcgtaaattcaagtgcactgaatgcggcaaagcatttaaatacaaacaccatcta
aaggagcacctacgcatccacagcggagagaaaccctacgagtgctccaactgcaagaag
cgcttctcccactcaggctcatacagctcccacatcagcagtaagaagtgcatcagcgtc
atctcagtcaacggcaggccgcgctcggggaacgccaaaacccagagccagggtctatcg
ccggttctgcccacgtcaccctcggccctccacacccagatcagggagaagctggagcac
agcaagcccctacaggagcagctgccactcaatcagatcaagaccgagcctgtggactac
gagtacaagccgaccttgataacatcccaagccatggccgccatgaacggcggggttttc
aatggaggtggctccactcctctgcagggcacagtgcaagccgtggtcctgcccacggtg
gggctgatgtcccccatcagcatcaacctggcagacctgcagaacgctctcaaagtggcg
gtagacggtaacgtcattcgtcaggtcctagaaagcaatgccaaaggccaagggcaggtg
aactcggggttaaccactggaatgctccatcctgcacagcagcaactcatctcagccatc
agcctgcccattgtgggtcaagatggaaatgcaaaaatcattataaactacagtttggac
cccaaccagggccagctcatggcccacaacctgaagaaagagtctgaacccacctctcca
gaccagaccaccactgacaccttcaaatcccagaaactccctgaggatctgaccatcagg
agaaccgggccaaatgaaacgaaagaaaaagaggaaaacaccactaagacttgtctcctg
tgtgataactgtcccggtgggctggaagcactccatgccctcacgcactgcaagaaggac
ggcgtgaggctgaacggagtgggcctggataagtcggactctgctgttgctgccttgctt
tcagagggaggtctctgtaatcaacccaagaacctgttgtccctgctcaaggcttacttt
gccttaaacgcagagcccaccaaggacgagctggcaaagatctccgactcagtcagcctg
ccaatccatgtggttaagaagtggtttgacaaaatgcaggagggtcagatatcgctgggt
gccccgacacctccctcggaggaggaggaggacacctgtgaagccagcagagtggtgtct
cttgtcccggggaaggacacggccaatatgagcccctccgggacccggggcagcccgacc
gaagccaccccagcggaagtcaacggcagtcacagcaccccagcctctccctcacctcta
aacctgacagctgggggtcccgtcccagccccgcctccccagagcactgagggaccccta
gacctgtcgctgccaaggcccaccagagaggaaggggagagagtgatggctgtagcccgt
gtttacccctccccttcctctggctccaatatggatgtggatgaacccctaaacttaact
tgcacaaagaaagaggcatcgccactctcagccatgggcgccagccccatcgcactgtac
gccagccagccaggtgccaaagcccttgacattgtgaccacaatgcaatgcctacgagca
ctcgccactaacaacaaacagactatcctgatcccccagctggcttacacttataccact
acagccagtagccctgctgggacccagacgcaggaaaccatccacctcaacggagttaag
gaggagaagcacgacacgggctcagaaggcgtgtccaccatggaggagcagaacgactcg
gactcgggccctgcgcggaagaagatgaagaagacggacggcagcatgtacgcctgtgac
ctgtgcgacaagatcttccagaagagcagctcgctgctgagacacaaatacgaacacacg
gggaagcggcctcacgagtgcggcatctgcagcaaggccttcaaacacaagcaccacttg
atcgaacacatgcgcctccactcgggggagaagccgtaccagtgcgacaagtgcggcaag
cgcttctcgcactcgggctcctacntccagcacatgaaccaccgctactcctactgcaag
aaggagacgcagggcgaaggccgcgagagccccgaggaggacggcgaggcccgggccgag
atggaggcgctggctcgactggagcggctcctggcgccctcccagctggacctggacgag
cgggggagcagcacgagggaggacgaggagagtgaagacgaggaggaggacggcgctgtg
gacatggatgacatccaagtggtgcagataggggacgaaggaggggatgaggaggaggaa
gaagagagaattgaggaggagacagaaatagtattaaaggagagagaagggggggaggaa
aggaatgaaatggagatggagaaagaaatggtggaggtggaaggtaacgagcagaggaat
gaggaggagatggagagagtgttggtgcagggaggagggcagaagaagaagacagcaata
gaggcggaagaggaagacaaggaggaagaccaggaggctgactcaaggcgggatgagttg
ctcggaagcagtcaggaagagaaaggggaggaggatgaggaggcgatggatgcagaggaa
gggctgacggaagaggggaaagcagaggtggaggtcacagaggggagtggaggcgaaaca
gacacggcttgtggagagcagaaccagacgctgcaggagaaatgcgatacggactga
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integrated database retrieval system
