Gasterosteus aculeatus (three-spined stickleback): 120811620
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Entry
120811620 CDS
T07457
Name
(RefSeq) lethal(3)malignant brain tumor-like protein 4
KO
K24387
lethal(3)malignant brain tumor-like protein
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
120811620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gat03000
]
120811620
03036 Chromosome and associated proteins [BR:
gat03036
]
120811620
Transcription factors [BR:
gat03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
120811620
Chromosome and associated proteins [BR:
gat03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
120811620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
zf-C2HC
SAM_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
120811620
NCBI-ProteinID:
XP_040023074
LinkDB
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Position
XXI:17271555..17278626
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AA seq
595 aa
AA seq
DB search
MKNKVCSTQVSVKRRSWSWQQYLNEQKSEAAPLSLFTQSQSVPSRRNGFKVGMKLEGVDP
LHPSMFCVLTVAEVIGCRLRLHIDSYSECYDFWVNSDSADIRHAGWCKDNNHRLHPPKGL
SETDFDWQHYLQSTGSHAAPPTLFTCRAASCGFHVGRKLEAVDRKNPGLVCVASVADVIG
DRFLVHFDNWDDTYDYWCDSSSPYIHPVGWCEEQGRPLTPPQGHSNPENFLWEEYLQQTG
STAAPSSAFTLRAPHGFQVNQKLEAVDRRNPMLIRVATVTDTENYRVKVHYDGWPQQFDV
WSDSDHCDLHPVGWCQRTGHPLEPPPGSSPTSPSQGVCPTRGCRGVGHIKGAKYTGHHSA
FGCPYSDINLRKEVLLPDRLGGERVITLVPVTMYHHGNQLDRGVRLSQTSRRDGLTMPST
GSTHRLPQPTKFLHMKQEEEELHITPAAESSLQAALHQSVFLSAMSAQPSRDLSLCWEQH
RKLLPGVSAVHAEMVQHWSVQEVSDFIESIPGCEEQAKQFRDEQIDGRAFLLLTQRDIVK
IMSMKLGPALKIFNSILMFKHAEDRSQSPAEDCCQSQYDTTSLHFSSNRRAGFSS
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacaaagtctgtagcactcaagtgagtgtaaagagacggtcctggtcctggcag
cagtacctgaacgaacagaaaagtgaagctgctcctctgtcactgtttacacagtcccag
tctgttcccagtaggagaaatggttttaaagttgggatgaagctggagggcgtcgacccg
ctgcatccttctatgttctgtgtgctgaccgttgctgaggtgattggctgtcggctccgc
ctccatatcgacagctactctgagtgctacgatttctgggtgaactctgactccgcagac
atccgacacgcaggctggtgtaaagataacaaccacaggctccacccacccaaaggcctc
agtgagacagactttgattggcagcattaccttcagtccacaggctctcatgctgctccg
ccgaccctgttcacctgtcgcgctgccagctgtggcttccatgtggggaggaagctggag
gcggtcgacaggaagaacccgggactcgtctgcgtcgcctccgtcgctgatgtcatcgga
gaccgtttcctggttcacttcgacaactgggatgacacgtacgactactggtgtgacagc
agcagtccgtacatccatcctgtgggctggtgtgaagaacaggggcgacctctgaccccc
cctcagggacactcaaacccagagaacttcctctgggaggaatacctccagcaaactggt
tccacagccgcccccagttcagccttcacactgagagctccacacggtttccaggtgaac
cagaagctggaggcagtggacaggaggaaccccatgttgatccgtgtcgccacggtaacg
gatacagagaactacagggtgaaggtccattatgacggctggccgcagcagtttgacgtc
tggagtgacagcgaccactgtgacctccatcctgtgggctggtgccaacgcacgggacac
ccgctggagccccccccaggctcctcccccacgtccccctcacagggagtctgtcccact
cggggctgcagaggagttggacacattaaaggagccaaatacaccggacatcacagcgct
ttcgggtgtccgtactcggacattaacctgcgtaaggaggtgctgcttcccgataggctg
gggggagagagagtcatcaccctcgtacccgtcaccatgtatcaccacggcaaccagtta
gacagaggggtgagactgagtcagacctccaggagagacggattgactatgccctccact
ggctccacccacagactgccccaaccaaccaaattcctccatatgaaacaggaagaggag
gagcttcacatcacaccagctgcagagtccagtctgcaggccgccctccaccagtcagtc
ttcttgtcggccatgtcggcgcagcccagccgcgacctgtctctctgctgggagcaacac
cgcaaactgctgcctggcgtctccgcagtccacgcagagatggtccaacactggagcgtc
caggaggtgtcagacttcattgagtctattcctggttgtgaagaacaggcgaaacagttc
agggacgagcaaatcgatgggcgggccttccttctactcacccaaagggacattgtcaag
attatgtcaatgaaacttggccccgccctcaaaattttcaactccatccttatgtttaaa
cacgccgaggaccggagccaatcacccgccgaggattgctgccaatcacaatacgacacc
acctctcttcacttttcatccaatcgtcgagcaggttttagttcctga
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