Gasterosteus aculeatus (three-spined stickleback): 120811641
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Entry
120811641 CDS
T07457
Symbol
gars1
Name
(RefSeq) glycine--tRNA ligase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
120811641 (gars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gat01007
]
120811641 (gars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gat03016
]
120811641 (gars1)
03029 Mitochondrial biogenesis [BR:
gat03029
]
120811641 (gars1)
Enzymes [BR:
gat01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
120811641 (gars1)
Amino acid related enzymes [BR:
gat01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
120811641 (gars1)
Transfer RNA biogenesis [BR:
gat03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
120811641 (gars1)
Mitochondrial biogenesis [BR:
gat03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
120811641 (gars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
tRNA-synt_2b
WHEP-TRS
OS-D
DUF5915
EcoRII-C
Motif
Other DBs
NCBI-GeneID:
120811641
NCBI-ProteinID:
XP_040023127
LinkDB
All DBs
Position
XXI:12148803..12154693
Genome browser
AA seq
749 aa
AA seq
DB search
MLRSAASALLRRTSTDIPALRPVTTVRIARQSLRYEPQKRPFSTSVRLSKRKKQSLWLQP
AGGQTMDGNIEAVLAPLRLAVKEQGDLVRQLKQDGAPDVDVARAVAELKARKRTLEAKEL
SLQPKDDIVDRSKMEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNILQAWRHHFI
QEEQILEIDCTMLTPESVLKTSGHVDKFADYMVKDVKNGECFRADHLLKAHLQKLMSDKK
CTAEKKAEMEQVTTQMDNYTQQELTDLFVKYNVKSPTTGNDLTAPISFNLMFQTSIGPGG
NMPGYLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAE
IEHFVDPNEKVHPKFPNVADLDITLYSSKAQTSGQSAHIMRLGDAVEQGVINNSVLGYFI
GRIYLYLTRVGIAKDKLRFRQHMDNEMAHYACDCWDAEAKTSYGWIEIVGCADRSCFDLQ
CHARATKVPLVAEKPLKEPKVVNVVQFEPNKGALGKAYKKDAKIAMEYLAQCDEGFIAEQ
ERLLNETGEFTIESEGKSFKLTKDMVGVKRFQKTLHVEEVVPNVIEPSFGIGRIMYTIFE
HTFHVREGDEQRTYFSFPATVSPYKCSVLPLSQNQEFMPFVKELSEAMTKNAVSHKVDDS
AGSIGRRYARTDEIGVAFGITIDFDTVNKEPHTATLRDRDSMRQIRAEVSELPVIVRDLA
NATLTWAEVESKYPIFEGQETSKKDTVEE
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgtagcgcagcatcagcactgctgaggaggaccagcactgacatccccgccctc
cgcccggtaacaacggtccggatcgctcggcagtcgctccgctacgaaccccaaaaacgg
ccgttttccacgtcggtccgcttgagtaagaggaagaagcaaagcctgtggctgcagccg
gcgggaggacaaaccatggacggcaacatcgaagcggttctcgcccctttgaggctcgcg
gtcaaagaacagggggacctggtgcgccaattgaaacaggatggagctccagatgtggat
gttgctagagctgtggctgaactgaaagcaaggaagagaaccctggaggccaaggagctg
tcgttacaacccaaagatgacatcgtagaccgatcaaagatggaggacaccctcaagaga
cgcttcttttacgaccaggcctttgccatctacggaggtgtgagcggcctgtacgacttc
ggccccgtgggctgtgccctgaagaacaacatcctgcaggcctggaggcatcacttcatc
caggaggagcagattctggaaatagactgcaccatgctgaccccggagtccgtcctcaag
acatcaggacatgtggacaaatttgctgactacatggtgaaagacgttaagaacggcgaa
tgcttcagggcagaccacctcctcaaagcccacctccagaagctgatgtctgataagaag
tgcacagcagaaaagaaggctgagatggagcaggtcacaactcagatggacaactacact
cagcaggagctgaccgatctctttgtgaaatacaacgtcaagtctcccaccacaggaaac
gacctcacggcccccatctccttcaacctgatgtttcagacgtccatcggaccggggggg
aacatgccgggctatctgaggcctgaaaccgctcagggaatcttcctcaacttcaaacgc
ctgttagagttcaaccagggaaaactgcccttcgctgctgctcagataggaaactccttc
aggaacgagatctctcctcgctctgggctcattcgtgtcagagagttcaccatggcggag
atcgagcactttgtggacccaaacgagaaggtccaccctaaattcccgaatgtagccgac
ctggacatcacgttgtactcctccaaggctcagaccagtggccagtctgcacacatcatg
aggctgggtgacgctgtggagcagggagtgatcaataactccgtcctgggatatttcatc
gggaggatctacctctacctcaccagagtcggtatcgccaaagacaagctgcgtttccgt
cagcacatggacaacgagatggctcactacgcctgcgactgctgggacgccgaagccaaa
acctcctacggctggatcgaaatcgtggggtgcgccgaccgctcttgcttcgacctgcag
tgccacgcgcgggctaccaaggtccctctggtcgcagagaagcctctcaaagaacccaaa
gttgtaaatgtcgtccagttcgagccaaacaaaggagctctgggaaaggcgtataagaag
gacgctaagatcgccatggagtatctggctcagtgtgacgagggcttcattgcagagcag
gagcggctgctcaatgagaccggagagttcaccatcgagtcggaaggcaagtccttcaaa
ctcaccaaggacatggtcggtgtgaagcgattccagaagaccctgcacgtggaggaagtt
gttcccaatgtgatcgagccctccttcggcatcggtaggatcatgtacaccatcttcgag
cacacgttccacgtccgagaaggcgacgaacaaagaacgtacttcagcttcccagccacc
gtatctccctacaaatgttccgtcctgcctctgagtcaaaaccaggaattcatgcccttt
gtgaaggagttatctgaggcgatgaccaaaaacgccgtgtctcacaaggtggacgactct
gcgggatccatcggcagacgttacgccaggacggacgagatcggggtggcgttcggcatc
accatcgacttcgacacggtgaacaaggagccacacacggccacgctgagggaccgcgac
tccatgagacagatccgggccgaggtcagtgagctgccggtgatcgttcgggatttggcc
aacgccacgttgacctgggccgaagtggagagcaagtaccccatcttcgaaggacaggag
accagcaagaaggacacggttgaagagtaa
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